Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR282140 Cardamine hirsuta HOM05D008505 ORTHO05D010735 5.3e-30 133.7 65 100.0
Solyc01g067760.1 Solanum lycopersicum HOM05D008505 ORTHO05D010735 2.3e-17 91.7 58 79.3
ATCG00630 Arabidopsis thaliana HOM05D008505 ORTHO05D010735 3.0e-17 91.3 44 100.0
PGR111G0077 Punica granatum HOM05D008505 ORTHO05D010735 6.7e-17 90.1 44 97.7
CAN.G2018.8 Capsicum annuum HOM05D008505 ORTHO05D010735 1.9e-16 88.6 44 95.5
CAN.G3365.2 Capsicum annuum HOM05D008505 ORTHO05D010735 1.9e-16 88.6 44 95.5
CAN.G35999.1 Capsicum annuum HOM05D008505 ORTHO05D010735 1.9e-16 88.6 44 95.5
CAN.G89.2 Capsicum annuum HOM05D008505 ORTHO05D010735 1.9e-16 88.6 44 95.5
Migut.D01431 Erythranthe guttata HOM05D008505 ORTHO05D010735 1.9e-16 88.6 44 95.5
PSO548G0021 Papaver somniferum HOM05D008505 ORTHO05D010735 1.9e-16 88.6 44 95.5
Solyc09g064400.2 Solanum lycopersicum HOM05D008505 ORTHO05D010735 1.9e-16 88.6 44 95.5
Phvul.002G090522 Phaseolus vulgaris HOM05D008505 ORTHO05D010735 5.7e-16 87.0 57 73.7
CAN.G452.6 Capsicum annuum HOM05D008505 ORTHO05D010735 9.6e-16 86.3 44 93.2
DCAR_032504 Daucus carota HOM05D008505 ORTHO05D010735 1.3e-15 85.9 42 97.6
Gorai.009G128900 Gossypium raimondii HOM05D008505 ORTHO05D010735 1.3e-15 85.9 43 93.0
C04p42980 Brassica napus HOM05D008505 ORTHO05D010735 1.6e-15 85.5 44 93.2
BolC4t25868H Brassica oleracea HOM05D008505 ORTHO05D010735 1.6e-15 85.5 44 93.2
CAN.G1595.9 Capsicum annuum HOM05D008505 ORTHO05D010735 2.1e-15 85.1 44 90.9
Glyma.12G232400 Glycine max HOM05D008505 ORTHO05D010735 2.1e-15 85.1 44 90.9
Glyma.15G126100 Glycine max HOM05D008505 ORTHO05D010735 2.1e-15 85.1 44 90.9
Phvul.009G188366 Phaseolus vulgaris HOM05D008505 ORTHO05D010735 2.1e-15 85.1 44 90.9
LjContig00318g0023250 Lotus japonicus HOM05D008505 ORTHO05D010735 3.7e-15 84.3 44 90.9
A06p23140 Brassica napus HOM05D008505 ORTHO05D010735 4.8e-15 84.0 42 97.6
C02p43560 Brassica napus HOM05D008505 ORTHO05D010735 4.8e-15 84.0 42 97.6
C06p22980 Brassica napus HOM05D008505 ORTHO05D010735 4.8e-15 84.0 42 97.6
BolC9t53162H Brassica oleracea HOM05D008505 ORTHO05D010735 4.8e-15 84.0 42 97.6
BolSC29t60474H Brassica oleracea HOM05D008505 ORTHO05D010735 4.8e-15 84.0 42 97.6
BolSC29t60595H Brassica oleracea HOM05D008505 ORTHO05D010735 4.8e-15 84.0 42 97.6
BolSC35t60655H Brassica oleracea HOM05D008505 ORTHO05D010735 4.8e-15 84.0 42 97.6
BolSC47t61089H Brassica oleracea HOM05D008505 ORTHO05D010735 4.8e-15 84.0 42 97.6
BraA06t25417Z Brassica rapa HOM05D008505 ORTHO05D010735 4.8e-15 84.0 42 97.6
BraSC138t45568Z Brassica rapa HOM05D008505 ORTHO05D010735 4.8e-15 84.0 42 97.6
BraSC25t45858Z Brassica rapa HOM05D008505 ORTHO05D010735 4.8e-15 84.0 42 97.6
BraSC58t46429Z Brassica rapa HOM05D008505 ORTHO05D010735 4.8e-15 84.0 42 97.6
CAN.G1739.9 Capsicum annuum HOM05D008505 ORTHO05D010735 8.2e-15 83.2 44 88.6
Gohir.A12G229532 Gossypium hirsutum HOM05D008505 ORTHO05D010735 1.1e-14 82.8 42 95.2
Nitab4.5_0011882g0050 Nicotiana tabacum HOM05D008505 ORTHO05D010735 1.4e-14 82.4 51 76.5
BolC2t08913H Brassica oleracea HOM05D008505 ORTHO05D010735 2.4e-14 81.6 43 93.0
Gorai.005G108800 Gossypium raimondii HOM05D008505 ORTHO05D010735 2.4e-14 81.6 43 88.4
arahy.Tifrunner.gnm1.ann1.DJ5Q02 Arachis hypogaea HOM05D008505 ORTHO05D010735 3.1e-14 81.3 42 90.5
Gohir.D12G108100 Gossypium hirsutum HOM05D008505 ORTHO05D010735 9.0e-14 79.7 42 92.9
BraSC103t45457Z Brassica rapa HOM05D008505 ORTHO05D010735 4.5e-13 77.4 41 92.7
BraSC103t45474Z Brassica rapa HOM05D008505 ORTHO05D010735 4.5e-13 77.4 42 92.9
CiPaw.11G114400 Carya illinoinensis HOM05D008505 ORTHO05D010735 6.5e-12 73.6 42 85.7
Gorai.007G307300 Gossypium raimondii HOM05D008505 ORTHO05D010735 1.1e-11 72.8 42 85.7
Potri.003G067501 Populus trichocarpa HOM05D008505 ORTHO05D010735 1.4e-11 72.4 42 81.0
Gohir.D06G113625 Gossypium hirsutum HOM05D008505 ORTHO05D010735 3.2e-11 71.2 41 85.4
Gorai.010G129600 Gossypium raimondii HOM05D007549 ORTHO05D009532 7.2e-11 70.1 38 86.8
Medtr8g045210 Medicago truncatula HOM05D007549 ORTHO05D009532 2.7e-10 68.2 61 59.0
BolSC35t60742H Brassica oleracea HOM05D008505 ORTHO05D010735 1.1e-08 62.8 31 96.8
Hund19833 Selenicereus undatus HOM05D008505 ORTHO05D010735 1.6e-07 58.9 37 78.4
ClCG00G001570 Citrullus lanatus HOM05D000540 ORTHO05D008899 4.8e-07 57.4 35 74.3
Nn3g18711 Nelumbo nucifera HOM05D008505 ORTHO05D010735 4.8e-07 57.4 28 96.4


User provided reference genes

Program Settings