Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR280880 Cardamine hirsuta HOM05D011091 ORTHO05D013198 4.6e-52 207.6 105 100.0
AL8G44630 Arabidopsis lyrata HOM05D011091 ORTHO05D013198 1.5e-34 149.4 109 76.1
AT5G66815 Arabidopsis thaliana HOM05D011091 ORTHO05D013198 4.4e-34 147.9 109 77.1
A02p44390 Brassica napus HOM05D011091 ORTHO05D013198 5.7e-34 147.5 101 72.3
BcaB07g29654 Brassica carinata HOM05D011091 ORTHO05D013198 2.4e-32 142.1 101 74.3
C02p64780 Brassica napus HOM05D011091 ORTHO05D013198 3.1e-32 141.7 101 68.3
BcaC03g18399 Brassica carinata HOM05D011091 ORTHO05D013198 5.3e-32 141.0 101 68.3
BolC2t12539H Brassica oleracea HOM05D011091 ORTHO05D013198 5.3e-32 141.0 101 68.3
Carub.0008s2769 Capsella rubella HOM05D011091 ORTHO05D013198 2.6e-31 138.7 106 71.7
BraA02t09356Z Brassica rapa HOM05D011091 ORTHO05D013198 5.9e-31 137.5 101 70.3
Thhalv10005488m.g Eutrema salsugineum HOM05D011091 ORTHO05D013198 1.5e-29 132.9 111 64.9
BraA07t29437Z Brassica rapa HOM05D011091 ORTHO05D013198 1.8e-27 125.9 107 66.4
A07p17100 Brassica napus HOM05D011091 ORTHO05D013198 5.2e-27 124.4 107 65.4
Sp2g29860 Schrenkiella parvula HOM05D011091 ORTHO05D013198 5.7e-26 120.9 105 62.9
BolC7t43026H Brassica oleracea HOM05D011091 ORTHO05D013198 4.8e-25 117.9 103 65.0
C07p24960 Brassica napus HOM05D011091 ORTHO05D013198 3.1e-24 115.2 103 64.1
BcaB02g09987 Brassica carinata HOM05D011091 ORTHO05D013198 1.3e-22 109.8 101 62.4
BcaC06g34751 Brassica carinata HOM05D011091 ORTHO05D013198 4.7e-12 74.7 66 65.2
TPR.G745 Trifolium pratense HOM05D008581 ORTHO05D009966 3.5e-07 58.5 113 36.3
QL06p042091 Quercus lobata HOM05D008581 ORTHO05D009966 4.5e-07 58.2 110 32.7
Lalb_Chr16g0378261 Lupinus albus HOM05D008581 ORTHO05D011864 1.0e-06 57.0 98 35.7
Lalb_Chr16g0378441 Lupinus albus HOM05D008581 ORTHO05D011864 1.0e-06 57.0 98 35.7
Gorai.003G022200 Gossypium raimondii HOM05D013202 ORTHO05D009966 1.3e-06 56.6 99 37.4
Gohir.D03G020800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 1.7e-06 56.2 99 37.4
Gorai.003G022000 Gossypium raimondii HOM05D013202 ORTHO05D009966 1.7e-06 56.2 99 37.4
COL.COLO4_11388 Corchorus olitorius HOM05D008581 ORTHO05D009966 2.3e-06 55.8 115 35.7
QL06p042046 Quercus lobata HOM05D008581 ORTHO05D009966 6.6e-06 54.3 110 31.8
Gohir.A02G159700 Gossypium hirsutum HOM05D013202 ORTHO05D009966 8.6e-06 53.9 99 37.4


User provided reference genes

Program Settings