Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR280850 Cardamine hirsuta HOM05D012520 ORTHO05D013638 1.8e-41 172.2 86 100.0
AL8G44590 Arabidopsis lyrata HOM05D012520 ORTHO05D013638 7.2e-27 123.6 87 74.7
A07p17070 Brassica napus HOM05D012520 ORTHO05D013638 1.8e-22 109.0 96 64.6
BraA07t29434Z Brassica rapa HOM05D012520 ORTHO05D013638 1.8e-22 109.0 96 64.6
BolC2t12536H Brassica oleracea HOM05D012520 ORTHO05D013638 3.1e-22 108.2 86 66.3
BcaC03g18397 Brassica carinata HOM05D012520 ORTHO05D013638 1.6e-21 105.9 86 65.1
BcaC06g34755 Brassica carinata HOM05D012520 ORTHO05D013638 2.7e-21 105.1 96 61.5
C07p24930 Brassica napus HOM05D012520 ORTHO05D013638 2.7e-21 105.1 96 64.6
BolC7t43022H Brassica oleracea HOM05D012520 ORTHO05D013638 2.7e-21 105.1 96 61.5
Sp2g29840 Schrenkiella parvula HOM05D012520 ORTHO05D013638 1.0e-20 103.2 96 62.5
C02p64740 Brassica napus HOM05D012520 ORTHO05D013638 7.5e-16 87.0 89 59.6
A02p44350 Brassica napus HOM05D012520 ORTHO05D013638 2.2e-15 85.5 69 68.1
BraA02t09352Z Brassica rapa HOM05D012520 ORTHO05D013638 2.2e-15 85.5 69 68.1
Sc03g0001440 Simmondsia chinensis HOM05D012520 ORTHO05D013638 1.5e-08 62.8 88 39.8
COL.COLO4_11385 Corchorus olitorius HOM05D007434 ORTHO05D009541 1.1e-06 56.6 96 42.7
Oeu050758.1 Olea europaea HOM05D007434 ORTHO05D009541 1.8e-06 55.8 94 45.7
BcaB02g09985 Brassica carinata HOM05D010198 ORTHO05D012308 2.4e-06 55.5 70 45.7
BcaB07g29653 Brassica carinata HOM05D010198 ORTHO05D012308 2.4e-06 55.5 76 42.1
A07p17080 Brassica napus HOM05D010198 ORTHO05D012308 2.4e-06 55.5 70 45.7
BraA07t29435Z Brassica rapa HOM05D010198 ORTHO05D012308 2.4e-06 55.5 70 45.7
Atru.chr3.395 Acer truncatum HOM05D007434 ORTHO05D013638 3.1e-06 55.1 102 37.3
A02p44360 Brassica napus HOM05D010198 ORTHO05D012308 3.1e-06 55.1 81 44.4
BraA02t09353Z Brassica rapa HOM05D010198 ORTHO05D012308 3.1e-06 55.1 81 44.4
Gohir.A11G190600 Gossypium hirsutum HOM05D007434 ORTHO05D009541 5.4e-06 54.3 91 44.0
Prupe.7G136100 Prunus persica HOM05D007434 ORTHO05D013638 5.4e-06 54.3 93 38.7
CiPaw.01G021300 Carya illinoinensis HOM05D007434 ORTHO05D009541 7.0e-06 53.9 79 35.4
C02p64760 Brassica napus HOM05D010198 ORTHO05D012308 9.2e-06 53.5 81 44.4
Cpa.g.sc55.177 Carica papaya HOM05D007434 ORTHO05D009541 9.2e-06 53.5 115 34.8
FAN26G1295 Fragaria x ananassa HOM05D007434 ORTHO05D019139 9.2e-06 53.5 90 34.4
FAN28G0171 Fragaria x ananassa HOM05D007434 ORTHO05D009541 9.2e-06 53.5 90 33.3
Phvul.003G245601 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 9.2e-06 53.5 79 36.7


User provided reference genes

Program Settings