Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR273620 Cardamine hirsuta HOM05D005647 ORTHO05D006968 5.9e-256 887.1 473 100.0
AL8G36550 Arabidopsis lyrata HOM05D005647 ORTHO05D006968 7.7e-163 577.8 493 68.0
AT5G59980 Arabidopsis thaliana HOM05D005647 ORTHO05D006968 6.5e-162 574.7 488 68.2
Carub.0004s0912 Capsella rubella HOM05D005647 ORTHO05D006968 6.1e-160 568.2 493 67.5
Thhalv10012856m.g Eutrema salsugineum HOM05D005647 ORTHO05D006968 1.5e-150 537.0 489 65.2
C02p11970 Brassica napus HOM05D005647 ORTHO05D006968 4.5e-147 525.4 475 65.9
BraA02t05750Z Brassica rapa HOM05D005647 ORTHO05D006968 4.5e-147 525.4 475 65.9
A02p06680 Brassica napus HOM05D005647 ORTHO05D006968 3.8e-146 522.3 475 65.9
BolC2t07297H Brassica oleracea HOM05D005647 ORTHO05D006968 4.4e-142 508.8 478 64.6
BcaC04g19653 Brassica carinata HOM05D005647 ORTHO05D006968 4.5e-131 472.2 475 62.5
C09p52480 Brassica napus HOM05D005647 ORTHO05D006968 4.5e-131 472.2 475 62.5
BolC9t58115H Brassica oleracea HOM05D005647 ORTHO05D006968 6.6e-130 468.4 481 62.0
A10p17190 Brassica napus HOM05D005647 ORTHO05D006968 5.6e-129 465.3 478 61.3
BraA10t43800Z Brassica rapa HOM05D005647 ORTHO05D006968 5.6e-129 465.3 478 61.3
BcaB05g22600 Brassica carinata HOM05D005647 ORTHO05D006968 6.4e-125 451.8 475 59.8
BcaB08g36205 Brassica carinata HOM05D005647 ORTHO05D006968 1.3e-122 444.1 474 58.9
Sp6g21650 Schrenkiella parvula HOM05D005647 ORTHO05D006968 2.1e-112 410.2 333 70.0
Aa31LG1G12110 Aethionema arabicum HOM05D005647 ORTHO05D006968 2.2e-101 373.6 527 47.8
THA.LOC104809599 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 6.7e-66 255.8 487 40.7
QL03p069904 Quercus lobata HOM05D005647 ORTHO05D006968 7.2e-36 156.0 175 49.7
RcHm_v2.0_Chr4g0385531 Rosa chinensis HOM05D005647 ORTHO05D006968 3.3e-33 147.1 146 54.8
MELO3C025708.2 Cucumis melo HOM05D005647 ORTHO05D006968 4.4e-33 146.7 126 58.7
Oeu058515.3 Olea europaea HOM05D005647 ORTHO05D006968 7.5e-33 146.0 138 52.9
Cfa011418 Carpinus fangiana HOM05D005647 ORTHO05D006968 1.7e-32 144.8 137 54.0
Rhsim01G0223800 Rhododendron simsii HOM05D005647 ORTHO05D006968 3.7e-32 143.7 179 45.3
RcHm_v2.0_Chr5g0062191 Rosa chinensis HOM05D005647 ORTHO05D006968 4.8e-32 143.3 146 53.4
ClCG02G020580 Citrullus lanatus HOM05D005647 ORTHO05D006968 6.3e-32 142.9 131 58.0
THA.LOC104813123 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 1.8e-31 141.4 168 53.0
Lj1A178T39 Lonicera japonica HOM05D005647 ORTHO05D006968 3.1e-31 140.6 163 47.2
Ciclev10027867m.g Citrus clementina HOM05D005647 ORTHO05D006968 5.3e-31 139.8 407 33.4
CANSAT54G2414 Cannabis sativa HOM05D005647 ORTHO05D006968 2.7e-30 137.5 487 31.0
SalBow3G1239 Salvia bowleyana HOM05D005647 ORTHO05D006968 2.7e-30 137.5 137 49.6
SalBow3G2669 Salvia bowleyana HOM05D005647 ORTHO05D006968 3.5e-30 137.1 137 49.6
FAN25G1201 Fragaria x ananassa HOM05D005647 ORTHO05D006968 4.5e-30 136.7 135 54.1
Gorai.009G103000 Gossypium raimondii HOM05D005647 ORTHO05D006968 4.5e-30 136.7 547 28.0
COL.COLO4_18417 Corchorus olitorius HOM05D005647 ORTHO05D006968 5.9e-30 136.3 549 29.7
FAN21G3075 Fragaria x ananassa HOM05D005647 ORTHO05D006968 5.9e-30 136.3 135 54.8
Nitab4.5_0008854g0020 Nicotiana tabacum HOM05D005647 ORTHO05D006968 5.9e-30 136.3 152 46.7
CsaV3_6G022020 Cucumis sativus L. HOM05D005647 ORTHO05D006968 7.7e-30 136.0 483 29.4
Gohir.A05G099200 Gossypium hirsutum HOM05D005647 ORTHO05D006968 7.7e-30 136.0 445 31.7
TWI75G1819 Tripterygium wilfordii HOM05D005647 ORTHO05D006968 7.7e-30 136.0 286 33.6
Ca_01361_v3 Cicer arietinum L. HOM05D005647 ORTHO05D006968 1.3e-29 135.2 146 50.0
FAN11G0841 Fragaria x ananassa HOM05D005647 ORTHO05D006968 1.3e-29 135.2 246 37.8
Thecc.09G331200 Theobroma cacao HOM05D005647 ORTHO05D006968 1.3e-29 135.2 445 31.5
FvH4_3g34550 Fragaria vesca HOM05D005647 ORTHO05D006968 2.2e-29 134.4 246 37.8
Lsat_1_v5_gn_5_167021 Lactuca sativa HOM05D005647 ORTHO05D006968 2.2e-29 134.4 132 52.3
Manes.04G028600 Manihot esculenta HOM05D005647 ORTHO05D006968 3.8e-29 133.7 119 57.1
DCAR_005295 Daucus carota HOM05D005647 ORTHO05D006968 1.1e-28 132.1 190 41.6
Eucgr.A02758 Eucalyptus grandis HOM05D005647 ORTHO05D006968 1.5e-28 131.7 126 52.4
Gohir.D05G099100 Gossypium hirsutum HOM05D005647 ORTHO05D006968 1.5e-28 131.7 544 29.6
Aa31LG5G21920 Aethionema arabicum HOM05D005647 ORTHO05D006968 3.2e-28 130.6 94 71.3
PSO447G0260 Papaver somniferum HOM05D005647 ORTHO05D006968 5.5e-28 129.8 158 48.7
CiPaw.13G102300 Carya illinoinensis HOM05D005647 ORTHO05D006968 7.2e-28 129.4 449 31.2
PGSC0003DMG400033668 Solanum tuberosum HOM05D005647 ORTHO05D006968 9.4e-28 129.0 162 45.1
Sopen06g001190 Solanum pennellii HOM05D005647 ORTHO05D006968 1.2e-27 128.6 140 47.1
MD11G1117900 Malus domestica HOM05D005647 ORTHO05D006968 1.6e-27 128.3 475 27.8
Dinv32824 Davidia involucrata HOM05D005647 ORTHO05D006968 2.1e-27 127.9 114 55.3
Migut.D02155 Erythranthe guttata HOM05D005647 ORTHO05D006968 2.7e-27 127.5 292 33.2
Solyc06g005200.3 Solanum lycopersicum HOM05D005647 ORTHO05D006968 2.7e-27 127.5 164 43.3
Atru.chr3.3782 Acer truncatum HOM05D005647 ORTHO05D006968 3.6e-27 127.1 458 29.3
HanXRQChr14g0429211 Helianthus annuus HOM05D005647 ORTHO05D006968 4.7e-27 126.7 149 47.7
Ah.15g096320 Amaranthus hybridus HOM05D005647 ORTHO05D006968 8.0e-27 125.9 195 42.1
MSTRG.21166 Avicennia marina HOM05D005647 ORTHO05D006968 8.0e-27 125.9 344 30.2
TAR623G0344 Trochodendron aralioides HOM05D005647 ORTHO05D006968 8.0e-27 125.9 137 50.4
Psat5g282040 Pisum sativum HOM05D005647 ORTHO05D006968 1.0e-26 125.6 158 43.7
Hund18946 Selenicereus undatus HOM05D005647 ORTHO05D006968 1.4e-26 125.2 187 41.7
Lj3g0017565 Lotus japonicus HOM05D005647 ORTHO05D006968 3.0e-26 124.0 156 46.2
Actinidia00810 Actinidia chinensis HOM05D005647 ORTHO05D006968 4.0e-26 123.6 507 27.2
GSVIVG01025064001 Vitis vinifera HOM05D005647 ORTHO05D006968 4.0e-26 123.6 498 28.9
arahy.Tifrunner.gnm1.ann1.7X2355 Arachis hypogaea HOM05D005647 ORTHO05D006968 5.2e-26 123.2 209 39.2
arahy.Tifrunner.gnm1.ann1.W04KXW Arachis hypogaea HOM05D005647 ORTHO05D006968 5.2e-26 123.2 205 40.0
Cpa.g.sc139.4 Carica papaya HOM05D005647 ORTHO05D006968 6.8e-26 122.9 501 26.9
Glyma.13G196800 Glycine max HOM05D005647 ORTHO05D006968 6.8e-26 122.9 335 32.5
Phvul.L002619 Phaseolus vulgaris HOM05D005647 ORTHO05D006968 6.8e-26 122.9 144 48.6
Prupe.6G088000 Prunus persica HOM05D005647 ORTHO05D006968 8.8e-26 122.5 488 28.1
Haze_23998 Corylus avellana HOM05D005647 ORTHO05D006968 1.2e-25 122.1 445 29.0
TPR.G17867 Trifolium pratense HOM05D005647 ORTHO05D006968 2.0e-25 121.3 125 50.4
AUR62001855 Chenopodium quinoa HOM05D005647 ORTHO05D006968 4.4e-25 120.2 125 49.6
Sc14g0000850 Simmondsia chinensis HOM05D005647 ORTHO05D006968 4.4e-25 120.2 258 32.9
Sed0021109 Sechium edule HOM05D005647 ORTHO05D006968 2.2e-24 117.9 524 27.3
TPR.G11621 Trifolium pratense HOM05D005647 ORTHO05D006968 2.2e-24 117.9 125 48.8
Duzib150G0770 Durio zibethinus HOM05D005647 ORTHO05D006968 6.3e-24 116.3 456 30.3
Aqoxy4G03106 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 1.8e-23 114.8 118 51.7
EL10Ac7g15937 Beta vulgaris HOM05D005647 ORTHO05D006968 1.8e-23 114.8 446 27.8
Nitab4.5_0000022g0330 Nicotiana tabacum HOM05D005647 ORTHO05D006968 1.8e-23 114.8 501 26.3
SGA_v2.0_scaffold61G21232 Striga asiatica HOM05D005647 ORTHO05D006968 2.4e-23 114.4 486 27.0
ECA248G2619 Erigeron canadensis HOM05D005647 ORTHO05D006968 4.1e-23 113.6 473 28.8
FAN16G2614 Fragaria x ananassa HOM05D005647 ORTHO05D006968 7.0e-23 112.8 500 26.4
Actinidia03769 Actinidia chinensis HOM05D005647 ORTHO05D006968 9.1e-23 112.5 484 28.7
MBI14_g34527_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 1.6e-22 111.7 123 51.2
arahy.Tifrunner.gnm1.ann1.S4SLQI Arachis hypogaea HOM05D005647 ORTHO05D006968 3.5e-22 110.5 476 27.1
VMungo1127G0608 Vigna mungo HOM05D005647 ORTHO05D006968 5.9e-22 109.8 471 25.3
Medtr2g096090 Medicago truncatula HOM05D005647 ORTHO05D006968 2.3e-21 107.8 447 27.3
PGR119G0370 Punica granatum HOM05D005647 ORTHO05D006968 2.9e-21 107.5 139 41.7
MBI03_g45445_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 2.5e-20 104.4 99 55.6
arahy.Tifrunner.gnm1.ann1.ZDAZ4C Arachis hypogaea HOM05D005647 ORTHO05D006968 9.5e-20 102.4 476 26.5
Peaxi162Scf00006g01310 Petunia axillaris HOM05D005647 ORTHO05D006968 1.2e-19 102.1 516 27.1
Lsat_1_v5_gn_5_100621 Lactuca sativa HOM05D005647 ORTHO05D006968 2.1e-19 101.3 132 40.9
VMungo1080G1709 Vigna mungo HOM05D005647 ORTHO05D006968 2.1e-19 101.3 515 25.4
unitig_736.g22430 Utricularia gibba HOM05D005647 ORTHO05D006968 3.6e-19 100.5 125 43.2
CAN.G200.2 Capsicum annuum HOM05D005647 ORTHO05D006968 6.1e-19 99.8 483 28.8
Cc01_g12040 Coffea canephora HOM05D005647 ORTHO05D006968 1.4e-18 98.6 488 25.8
vmacro14498 Vaccinium macrocarpon HOM05D005647 ORTHO05D006968 1.4e-18 98.6 193 35.8
PSO541G4932 Papaver somniferum HOM05D005647 ORTHO05D006968 3.0e-18 97.4 496 28.0
PSO675G6613 Papaver somniferum HOM05D005647 ORTHO05D006968 8.9e-18 95.9 504 28.4
Sabra09G0017200 Salix brachista HOM05D005647 ORTHO05D000187 3.4e-17 94.0 529 24.0
Lalb_Chr24g0394311 Lupinus albus HOM05D005647 ORTHO05D006968 4.4e-17 93.6 439 28.0
Potri.009G025800 Populus trichocarpa HOM05D005647 ORTHO05D006968 9.8e-17 92.4 529 25.1
ATR0787G117 Amborella trichopoda HOM05D005647 ORTHO05D006968 6.3e-16 89.7 86 48.8
CDE08G0081 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 1.4e-15 88.6 97 47.4
CDE02G4018 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 5.4e-15 86.7 92 48.9
Aqoxy4G03104_Aqoxy4G03103 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 1.6e-14 85.1 124 40.3
MBI10_g46876_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 2.3e-13 81.3 80 50.0
AUR62009649 Chenopodium quinoa HOM05D005647 ORTHO05D006968 6.6e-13 79.7 434 26.7
SEGI_06158 Sequoiadendron giganteum HOM05D005647 ORTHO05D006968 8.0e-11 72.8 86 43.0
SEGI_32841 Sequoiadendron giganteum HOM05D005647 ORTHO05D006968 8.0e-11 72.8 86 43.0
Os12g0175900 Oryza sativa ssp. japonica HOM05D005647 ORTHO05D006968 4.0e-10 70.5 77 44.2
Gorai.013G129300 Gossypium raimondii HOM05D005647 ORTHO05D006968 5.8e-09 66.6 56 58.9
Gohir.D11G155700 Gossypium hirsutum HOM05D001229 ORTHO05D011852 7.5e-09 66.2 54 57.4
Gorai.007G165900 Gossypium raimondii HOM05D001229 ORTHO05D011852 7.5e-09 66.2 54 57.4
Pp3c23_18130 Physcomitrium patens HOM05D005647 ORTHO05D006968 1.2e-06 58.9 106 39.6


User provided reference genes

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