Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR273150 Cardamine hirsuta HOM05D000106 ORTHO05D000160 7.7e-29 129.8 66 100.0
AT5G59660 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 3.3e-19 97.8 60 78.3
CARHR273220 Cardamine hirsuta HOM05D000106 ORTHO05D000160 8.3e-15 83.2 54 70.4
BcaB05g22530 Brassica carinata HOM05D000106 ORTHO05D000160 1.1e-14 82.8 53 75.5
Thhalv10012629m.g Eutrema salsugineum HOM05D000106 ORTHO05D000160 1.0e-12 76.3 53 67.9
A02p06970 Brassica napus HOM05D000106 ORTHO05D000160 1.7e-12 75.5 56 60.7
A02p06980 Brassica napus HOM05D000106 ORTHO05D000160 1.7e-12 75.5 66 63.6
BraA02t05777Z Brassica rapa HOM05D000106 ORTHO05D000160 1.7e-12 75.5 56 60.7
C02p12310 Brassica napus HOM05D000106 ORTHO05D000160 2.9e-12 74.7 66 63.6
BolC2t07331H Brassica oleracea HOM05D000106 ORTHO05D000160 2.9e-12 74.7 66 63.6
BcaC03g13993 Brassica carinata HOM05D000106 ORTHO05D000160 3.9e-12 74.3 56 60.7
BolC2t07329H Brassica oleracea HOM05D000106 ORTHO05D000160 3.9e-12 74.3 56 60.7
BraA02t05779Z Brassica rapa HOM05D000106 ORTHO05D000160 3.9e-12 74.3 53 71.7
Thhalv10012638m.g Eutrema salsugineum HOM05D000106 ORTHO05D000160 8.6e-12 73.2 56 60.7
Sp6g21350 Schrenkiella parvula HOM05D000106 ORTHO05D000160 8.6e-12 73.2 53 62.3
C03p13410 Brassica napus HOM05D000106 ORTHO05D000160 1.5e-11 72.4 53 66.0
BolC3t13799H Brassica oleracea HOM05D000106 ORTHO05D000160 1.5e-11 72.4 53 66.0
BcaC01g06503 Brassica carinata HOM05D000106 ORTHO05D000160 1.9e-11 72.0 53 66.0
Sp6g12470 Schrenkiella parvula HOM05D000106 ORTHO05D000160 1.9e-11 72.0 54 63.0
C03p13370 Brassica napus HOM05D000106 ORTHO05D000160 2.5e-11 71.6 54 63.0
BcaB05g22528 Brassica carinata HOM05D000106 ORTHO05D000160 3.3e-11 71.2 53 64.2
A03p11560 Brassica napus HOM05D000106 ORTHO05D000160 3.3e-11 71.2 51 62.7
CARHR273210 Cardamine hirsuta HOM05D000106 ORTHO05D000160 3.3e-11 71.2 52 61.5
A02p06960 Brassica napus HOM05D000106 ORTHO05D000160 4.3e-11 70.9 54 63.0
BraA02t05776Z Brassica rapa HOM05D000106 ORTHO05D000160 4.3e-11 70.9 54 63.0
AT5G59680 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 5.6e-11 70.5 56 60.7
BcaC01g06507 Brassica carinata HOM05D000106 ORTHO05D000160 5.6e-11 70.5 51 60.8
C03p13440 Brassica napus HOM05D000106 ORTHO05D000160 7.3e-11 70.1 51 60.8
AL8G36200 Arabidopsis lyrata HOM05D000106 ORTHO05D000160 1.2e-10 69.3 53 60.4
BcaB01g04561 Brassica carinata HOM05D000106 ORTHO05D000160 2.8e-10 68.2 54 59.3
BcaB06g28338 Brassica carinata HOM05D000106 ORTHO05D000160 2.8e-10 68.2 53 58.5
CARHR273250 Cardamine hirsuta HOM05D000106 ORTHO05D000160 3.6e-10 67.8 66 53.0
AL8G36140 Arabidopsis lyrata HOM05D000106 ORTHO05D000160 4.7e-10 67.4 53 58.5
CARHR273230 Cardamine hirsuta HOM05D000106 ORTHO05D000160 4.7e-10 67.4 54 55.6
BcaB05g22527 Brassica carinata HOM05D000106 ORTHO05D000160 6.1e-10 67.0 51 60.8
BolC2t07332H Brassica oleracea HOM05D000106 ORTHO05D000160 6.1e-10 67.0 55 56.4
Carub.0008s2030 Capsella rubella HOM05D000106 ORTHO05D000160 8.0e-10 66.6 53 64.2
AL8G36160 Arabidopsis lyrata HOM05D000106 ORTHO05D000160 1.8e-09 65.5 53 58.5
AT5G59616 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 1.8e-09 65.5 53 54.7
BcaB08g36232 Brassica carinata HOM05D000106 ORTHO05D000160 1.8e-09 65.5 51 60.8
Aa31sc23G270 Aethionema arabicum HOM05D000106 ORTHO05D000160 2.3e-09 65.1 53 58.5
Carub.0008s2032 Capsella rubella HOM05D000106 ORTHO05D000160 2.3e-09 65.1 51 58.8
BcaB02g11042 Brassica carinata HOM05D000106 ORTHO05D000160 4.0e-09 64.3 56 57.1
BcaC03g13994 Brassica carinata HOM05D000106 ORTHO05D000160 4.0e-09 64.3 55 54.5
Thhalv10012663m.g Eutrema salsugineum HOM05D000106 ORTHO05D000160 4.0e-09 64.3 51 56.9
AT5G59650 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 5.2e-09 63.9 52 59.6
BcaB05g22531 Brassica carinata HOM05D000106 ORTHO05D000160 5.2e-09 63.9 51 56.9
C02p12320 Brassica napus HOM05D000106 ORTHO05D000160 8.9e-09 63.2 50 60.0
BcaB08g36231 Brassica carinata HOM05D000106 ORTHO05D000160 1.2e-08 62.8 51 54.9
A10p16890 Brassica napus HOM05D000106 ORTHO05D000160 1.2e-08 62.8 48 60.4
A10p16880 Brassica napus HOM05D000106 ORTHO05D000160 1.5e-08 62.4 50 58.0
C02p12280 Brassica napus HOM05D000106 ORTHO05D000160 1.5e-08 62.4 51 56.9
BraA02t05780Z Brassica rapa HOM05D000106 ORTHO05D000160 1.5e-08 62.4 51 56.9
Sp5g15300 Schrenkiella parvula HOM05D000106 ORTHO05D000160 2.6e-08 61.6 54 57.4
C03p70880 Brassica napus HOM05D000106 ORTHO05D000160 3.4e-08 61.2 54 55.6
BolC3t19360H Brassica oleracea HOM05D000106 ORTHO05D000160 3.4e-08 61.2 54 55.6
BraA02t05778Z Brassica rapa HOM05D000106 ORTHO05D000160 3.4e-08 61.2 51 54.9
CARHR219850 Cardamine hirsuta HOM05D000106 ORTHO05D000160 3.4e-08 61.2 52 53.8
Thhalv10012805m.g Eutrema salsugineum HOM05D000106 ORTHO05D000160 3.4e-08 61.2 53 54.7
BcaC03g13995 Brassica carinata HOM05D000106 ORTHO05D000160 5.8e-08 60.5 53 56.6
C02p12340 Brassica napus HOM05D000106 ORTHO05D000160 5.8e-08 60.5 53 56.6
BolC2t07334H Brassica oleracea HOM05D000106 ORTHO05D000160 5.8e-08 60.5 53 56.6
BolC6t39898H Brassica oleracea HOM05D000106 ORTHO05D000160 5.8e-08 60.5 54 53.7
BcaC08g43943 Brassica carinata HOM05D000106 ORTHO05D000160 7.5e-08 60.1 56 53.6
C06p13380 Brassica napus HOM05D000106 ORTHO05D000160 7.5e-08 60.1 56 53.6
BolC6t36498H Brassica oleracea HOM05D000106 ORTHO05D000160 7.5e-08 60.1 56 53.6
Sp6g21330 Schrenkiella parvula HOM05D000106 ORTHO05D000160 7.5e-08 60.1 52 57.7
BcaB01g00990 Brassica carinata HOM05D000106 ORTHO05D000160 9.8e-08 59.7 54 53.7
A10p16900 Brassica napus HOM05D000106 ORTHO05D000160 9.8e-08 59.7 52 55.8
BolC9t58078H Brassica oleracea HOM05D000106 ORTHO05D000160 9.8e-08 59.7 52 55.8
BraA10t43771Z Brassica rapa HOM05D000106 ORTHO05D000160 9.8e-08 59.7 52 55.8
C02p12290 Brassica napus HOM05D000106 ORTHO05D000160 1.3e-07 59.3 50 50.0
BolC2t07330H Brassica oleracea HOM05D000106 ORTHO05D000160 1.3e-07 59.3 50 50.0
BraA05t20836Z Brassica rapa HOM05D000106 ORTHO05D000160 1.3e-07 59.3 56 53.6
THA.LOC104810550 Tarenaya hassleriana HOM05D000106 ORTHO05D000160 1.3e-07 59.3 51 54.9
AL8G36170 Arabidopsis lyrata HOM05D000106 ORTHO05D000160 1.7e-07 58.9 53 52.8
A05p19320 Brassica napus HOM05D000106 ORTHO05D000160 1.7e-07 58.9 56 53.6
BcaC01g01895 Brassica carinata HOM05D000106 ORTHO05D000160 2.2e-07 58.5 54 53.7
Thhalv10003111m.g Eutrema salsugineum HOM05D000106 ORTHO05D000160 2.2e-07 58.5 54 53.7
AT5G59670 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 2.9e-07 58.2 66 47.0
BcaC04g19747 Brassica carinata HOM05D000106 ORTHO05D000160 2.9e-07 58.2 49 53.1
C09p52050 Brassica napus HOM05D000106 ORTHO05D000160 2.9e-07 58.2 49 53.1
BolC9t58067H Brassica oleracea HOM05D000106 ORTHO05D000160 2.9e-07 58.2 49 53.1
BcaB01g04559 Brassica carinata HOM05D000106 ORTHO05D000160 3.7e-07 57.8 51 51.0
CARHR273240 Cardamine hirsuta HOM05D000106 ORTHO05D000160 4.9e-07 57.4 51 52.9
Thhalv10002396m.g Eutrema salsugineum HOM05D000106 ORTHO05D000160 4.9e-07 57.4 52 55.8
AT3G46340 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 6.4e-07 57.0 51 52.9
AT3G46420 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 6.4e-07 57.0 48 52.1
Sp6g21340 Schrenkiella parvula HOM05D000106 ORTHO05D000160 6.4e-07 57.0 50 52.0
Aa31LG4G15410 Aethionema arabicum HOM05D000106 ORTHO05D000160 8.3e-07 56.6 53 52.8
Carub.0008s2031 Capsella rubella HOM05D000106 ORTHO05D000160 8.3e-07 56.6 52 51.9
CARHR273130 Cardamine hirsuta HOM05D000106 ORTHO05D000160 8.3e-07 56.6 52 59.6
BcaC01g01913 Brassica carinata HOM05D000106 ORTHO05D000160 1.1e-06 56.2 54 50.0
C03p70670 Brassica napus HOM05D000106 ORTHO05D000160 1.1e-06 56.2 54 50.0
BolC3t19315H Brassica oleracea HOM05D000106 ORTHO05D000160 1.1e-06 56.2 54 50.0
CARHR273170 Cardamine hirsuta HOM05D000106 ORTHO05D000160 1.1e-06 56.2 54 53.7
Sp4g10470 Schrenkiella parvula HOM05D000106 ORTHO05D000160 1.1e-06 56.2 48 54.2
THA.LOC104800666 Tarenaya hassleriana HOM05D000106 ORTHO05D000160 1.1e-06 56.2 67 46.3
Aa31LG10G2990 Aethionema arabicum HOM05D000106 ORTHO05D000160 1.4e-06 55.8 51 52.9
AL5G25240 Arabidopsis lyrata HOM05D000106 ORTHO05D000160 1.4e-06 55.8 52 50.0
AT1G51810 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 1.4e-06 55.8 47 55.3
BraA06t25174Z Brassica rapa HOM05D000106 ORTHO05D000160 1.4e-06 55.8 54 50.0
Carub.0005s1218 Capsella rubella HOM05D000106 ORTHO05D000160 1.4e-06 55.8 50 58.0
AT3G21340 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 1.9e-06 55.5 65 43.1
BcaB01g01013 Brassica carinata HOM05D000106 ORTHO05D000160 1.9e-06 55.5 54 50.0
Carub.0002s1143 Capsella rubella HOM05D000106 ORTHO05D000160 1.9e-06 55.5 65 43.1
Carub.0003s2137 Capsella rubella HOM05D000106 ORTHO05D000160 1.9e-06 55.5 65 43.1
CARHR039100 Cardamine hirsuta HOM05D000106 ORTHO05D000160 1.9e-06 55.5 56 51.8
AL1G59870 Arabidopsis lyrata HOM05D000106 ORTHO05D000160 2.4e-06 55.1 50 54.0
AT1G49100 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 2.4e-06 55.1 53 50.9
BcaB07g30725 Brassica carinata HOM05D000106 ORTHO05D000160 2.4e-06 55.1 53 47.2
BraA10t43769Z Brassica rapa HOM05D000106 ORTHO05D000160 2.4e-06 55.1 51 47.1
AT1G51830 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 3.2e-06 54.7 50 52.0
CARHR041980 Cardamine hirsuta HOM05D000106 ORTHO05D000160 3.2e-06 54.7 51 51.0
CARHR154840 Cardamine hirsuta HOM05D000106 ORTHO05D000160 3.2e-06 54.7 47 51.1
Sp3g19400 Schrenkiella parvula HOM05D000106 ORTHO05D000160 3.2e-06 54.7 47 51.1
Aa31LG10G2970 Aethionema arabicum HOM05D000106 ORTHO05D000160 4.1e-06 54.3 50 48.0
AL1G55940 Arabidopsis lyrata HOM05D000106 ORTHO05D000160 4.1e-06 54.3 52 51.9
A05p19310 Brassica napus HOM05D000106 ORTHO05D000160 4.1e-06 54.3 50 50.0
A06p28390 Brassica napus HOM05D000106 ORTHO05D000160 4.1e-06 54.3 44 56.8
C01p33440 Brassica napus HOM05D000106 ORTHO05D000160 4.1e-06 54.3 50 54.0
C06p13410 Brassica napus HOM05D000106 ORTHO05D000160 4.1e-06 54.3 50 50.0
BolC6t36500H Brassica oleracea HOM05D000106 ORTHO05D000160 4.1e-06 54.3 50 50.0
BraA05t20835Z Brassica rapa HOM05D000106 ORTHO05D000160 4.1e-06 54.3 50 50.0
BraA06t25782Z Brassica rapa HOM05D000106 ORTHO05D000160 4.1e-06 54.3 44 56.8
AT3G46330 Arabidopsis thaliana HOM05D000106 ORTHO05D000160 5.4e-06 53.9 50 52.0
BcaB04g20594 Brassica carinata HOM05D000106 ORTHO05D000160 7.0e-06 53.5 55 45.5
BraA10t43767Z Brassica rapa HOM05D000106 ORTHO05D000160 7.0e-06 53.5 48 50.0
CARHR041970 Cardamine hirsuta HOM05D000106 ORTHO05D000160 7.0e-06 53.5 51 47.1
Aa31sc13G40 Aethionema arabicum HOM05D000106 ORTHO05D000160 9.2e-06 53.1 52 44.2
AL5G25230 Arabidopsis lyrata HOM05D000106 ORTHO05D000160 9.2e-06 53.1 50 52.0
BcaC01g03507 Brassica carinata HOM05D000106 ORTHO05D000160 9.2e-06 53.1 47 53.2
A03p42210 Brassica napus HOM05D000106 ORTHO05D000160 9.2e-06 53.1 65 41.5
A05p27260 Brassica napus HOM05D000106 ORTHO05D000160 9.2e-06 53.1 47 48.9
C03p51660 Brassica napus HOM05D000106 ORTHO05D000160 9.2e-06 53.1 47 53.2
BolC3t17451H Brassica oleracea HOM05D000106 ORTHO05D000160 9.2e-06 53.1 47 53.2
Carub.0001s3825 Capsella rubella HOM05D000106 ORTHO05D000160 9.2e-06 53.1 56 46.4
CARHR007320 Cardamine hirsuta HOM05D000106 ORTHO05D000160 9.2e-06 53.1 47 51.1
CARHR273200 Cardamine hirsuta HOM05D000106 ORTHO05D000160 9.2e-06 53.1 46 56.5
THA.LOC104810551 Tarenaya hassleriana HOM05D000106 ORTHO05D000160 9.2e-06 53.1 51 49.0


User provided reference genes

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