Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR266780 Cardamine hirsuta HOM05D000051 ORTHO05D000015 4.4e-46 187.6 92 100.0
CARHR284840 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.0e-30 135.6 92 75.0
CARHR257990 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.1e-25 119.8 83 72.3
CARHR266730 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.5e-25 119.4 83 74.7
Carub.0008s1390 Capsella rubella HOM05D000051 ORTHO05D000015 8.0e-24 113.6 88 64.8
CARHR036480 Cardamine hirsuta HOM05D000051 ORTHO05D000015 8.8e-23 110.2 90 65.6
AL8G28520 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.5e-22 109.4 88 63.6
Carub.0008s1259 Capsella rubella HOM05D000051 ORTHO05D000015 1.5e-22 109.4 90 62.2
AL8G28540 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 9.8e-22 106.7 83 63.9
Carub.0008s1386 Capsella rubella HOM05D000051 ORTHO05D000015 2.2e-21 105.5 89 59.6
AL8G28350 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.8e-21 104.4 83 62.7
AL8G28510 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.8e-20 102.4 83 61.4
A03p15060 Brassica napus HOM05D000051 ORTHO05D000015 1.8e-20 102.4 83 60.2
BraA03t10800Z Brassica rapa HOM05D000051 ORTHO05D000015 1.8e-20 102.4 83 60.2
AL8G28560 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.1e-20 101.7 83 59.0
Sp6g15740 Schrenkiella parvula HOM05D000051 ORTHO05D000015 3.1e-20 101.7 82 59.8
Carub.0008s1389 Capsella rubella HOM05D000051 ORTHO05D000015 7.0e-20 100.5 83 60.2
Carub.0008s1396 Capsella rubella HOM05D000051 ORTHO05D000015 7.0e-20 100.5 83 59.0
C03p17550 Brassica napus HOM05D000051 ORTHO05D000015 1.6e-19 99.4 83 59.0
C03p17560 Brassica napus HOM05D000051 ORTHO05D000015 1.6e-19 99.4 83 59.0
BolC3t14169H Brassica oleracea HOM05D000051 ORTHO05D000015 1.6e-19 99.4 83 59.0
BolC3t14170H Brassica oleracea HOM05D000051 ORTHO05D000015 1.6e-19 99.4 83 59.0
Carub.0008s1391 Capsella rubella HOM05D000051 ORTHO05D000015 1.6e-19 99.4 83 59.0
A03p15050 Brassica napus HOM05D000051 ORTHO05D000015 1.0e-18 96.7 83 57.8
BraA03t10799Z Brassica rapa HOM05D000051 ORTHO05D000015 1.0e-18 96.7 83 57.8
AL8G28470 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.9e-18 95.1 83 57.8
AL8G28530 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.9e-18 95.1 83 57.8
Carub.0008s1392 Capsella rubella HOM05D000051 ORTHO05D000015 1.5e-17 92.8 83 56.6
CARHR224090 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.9e-17 92.4 70 71.4
Thhalv10015428m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.5e-17 90.9 84 61.9
CARHR266790 Cardamine hirsuta HOM05D000051 ORTHO05D000015 7.2e-17 90.5 81 59.3
Thhalv10015903m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.8e-15 85.9 79 55.7
BcaB01g04246 Brassica carinata HOM05D000051 ORTHO05D000015 2.6e-14 82.0 83 53.0
BcaC04g20427 Brassica carinata HOM05D000051 ORTHO05D000015 4.1e-12 74.7 79 51.9
Carub.0008s1394 Capsella rubella HOM05D000051 ORTHO05D000015 9.2e-12 73.6 84 47.6
Carub.0008s1379 Capsella rubella HOM05D000051 ORTHO05D000015 2.7e-11 72.0 85 49.4
AL8G28900 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.3e-10 69.7 84 47.6
C09p43520 Brassica napus HOM05D000051 ORTHO05D000015 4.3e-09 64.7 77 49.4
Thhalv10013520m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.6e-08 61.6 78 42.3
AL8G28500 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 6.1e-08 60.8 74 43.2
AT5G53840 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 8.0e-08 60.5 86 41.9
Carub.0008s1413 Capsella rubella HOM05D000051 ORTHO05D000015 8.0e-08 60.5 83 43.4
AT1G51370 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.8e-07 59.3 82 43.9
BolC3t17929H Brassica oleracea HOM05D000051 ORTHO05D000015 3.0e-07 58.5 82 37.8
AL8G28380 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.2e-07 57.8 81 38.3
Carub.0008s1382 Capsella rubella HOM05D000051 ORTHO05D000015 6.8e-07 57.4 94 41.5
Dinv42542 Davidia involucrata HOM05D000051 ORTHO05D000015 8.9e-07 57.0 73 41.1
BcaB01g04216 Brassica carinata HOM05D000051 ORTHO05D000015 1.5e-06 56.2 77 39.0
AL8G28490 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.6e-06 55.5 81 37.0
A02p10940 Brassica napus HOM05D000051 ORTHO05D000015 2.6e-06 55.5 77 40.3
C02p18150 Brassica napus HOM05D000051 ORTHO05D000015 2.6e-06 55.5 77 40.3
BraA02t06159Z Brassica rapa HOM05D000051 ORTHO05D000015 2.6e-06 55.5 77 40.3
Thhalv10001812m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.4e-06 55.1 80 40.0
AL6G33620 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.4e-06 54.7 74 36.5
BcaB05g22062 Brassica carinata HOM05D000051 ORTHO05D000015 5.7e-06 54.3 77 39.0
C03p17990 Brassica napus HOM05D000051 ORTHO05D000015 5.7e-06 54.3 77 37.7
BolC3t14205H Brassica oleracea HOM05D000051 ORTHO05D000015 5.7e-06 54.3 77 37.7
BraA03t10831Z Brassica rapa HOM05D000051 ORTHO05D000015 5.7e-06 54.3 77 37.7
Thhalv10015873m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.7e-06 54.3 50 52.0


User provided reference genes

Program Settings