Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR265690 Cardamine hirsuta HOM05D000607 ORTHO05D010164 6.1e-28 127.1 81 100.0
CARHR265680 Cardamine hirsuta HOM05D000607 ORTHO05D010164 5.6e-13 77.4 54 74.1
A02p11650 Brassica napus HOM05D000607 ORTHO05D010164 9.5e-13 76.6 45 86.7
BraA02t06228Z Brassica rapa HOM05D000607 ORTHO05D010164 2.8e-12 75.1 45 84.4
BcaB01g00906 Brassica carinata HOM05D000607 ORTHO05D010164 6.2e-12 73.9 45 82.2
BcaC03g14510 Brassica carinata HOM05D000607 ORTHO05D010164 6.2e-12 73.9 45 82.2
BcaC03g14511 Brassica carinata HOM05D000607 ORTHO05D010164 6.2e-12 73.9 45 82.2
BcaC03g14506 Brassica carinata HOM05D000607 ORTHO05D010164 1.4e-11 72.8 44 81.8
C02p19460 Brassica napus HOM05D000607 ORTHO05D010164 1.4e-11 72.8 45 80.0
C02p19470 Brassica napus HOM05D000607 ORTHO05D010164 1.4e-11 72.8 45 80.0
BolC2t08079H Brassica oleracea HOM05D000607 ORTHO05D010164 1.4e-11 72.8 45 80.0
BolC2t08080H Brassica oleracea HOM05D000607 ORTHO05D010164 1.4e-11 72.8 45 80.0
Sp6g14880 Schrenkiella parvula HOM05D000607 ORTHO05D010164 1.8e-11 72.4 45 80.0
Carub.0008s1293 Capsella rubella HOM05D000607 ORTHO05D010164 3.1e-11 71.6 45 75.6
BcaB01g04211 Brassica carinata HOM05D000607 ORTHO05D010164 5.2e-11 70.9 54 64.8
Sp6g14870 Schrenkiella parvula HOM05D000607 ORTHO05D010164 5.2e-11 70.9 50 74.0
A02p11640 Brassica napus HOM05D000607 ORTHO05D010164 8.9e-11 70.1 46 73.9
Aa31LG3G8990 Aethionema arabicum HOM05D000607 ORTHO05D010164 1.5e-10 69.3 54 63.0
AL8G27190 Arabidopsis lyrata HOM05D000607 ORTHO05D010164 2.0e-10 68.9 45 75.6
BcaC03g14502 Brassica carinata HOM05D000607 ORTHO05D010164 2.0e-10 68.9 45 77.8
C03p18170 Brassica napus HOM05D000607 ORTHO05D010164 2.0e-10 68.9 45 75.6
C03p18190 Brassica napus HOM05D000607 ORTHO05D010164 2.0e-10 68.9 45 75.6
BolC3t14218H Brassica oleracea HOM05D000607 ORTHO05D010164 2.0e-10 68.9 45 75.6
BolC3t14220H Brassica oleracea HOM05D000607 ORTHO05D010164 2.0e-10 68.9 45 75.6
BcaB05g21974 Brassica carinata HOM05D000607 ORTHO05D010164 2.6e-10 68.6 45 77.8
A03p15560 Brassica napus HOM05D000607 ORTHO05D010164 2.6e-10 68.6 45 73.3
BraA03t10848Z Brassica rapa HOM05D000607 ORTHO05D010164 2.6e-10 68.6 45 73.3
BraA10t43104Z Brassica rapa HOM05D000607 ORTHO05D010164 2.6e-10 68.6 40 80.0
CARHR265710 Cardamine hirsuta HOM05D000607 ORTHO05D010164 2.6e-10 68.6 38 86.8
AT5G52770 Arabidopsis thaliana HOM05D000607 ORTHO05D010164 4.4e-10 67.8 45 66.7
A02p11630 Brassica napus HOM05D000607 ORTHO05D010164 5.8e-10 67.4 45 75.6
BraA02t06224Z Brassica rapa HOM05D000607 ORTHO05D010164 5.8e-10 67.4 45 75.6
BcaB05g21977 Brassica carinata HOM05D000607 ORTHO05D010164 7.5e-10 67.0 52 65.4
BcaB08g35624 Brassica carinata HOM05D000607 ORTHO05D010164 9.9e-10 66.6 44 72.7
C02p19400 Brassica napus HOM05D000607 ORTHO05D010164 9.9e-10 66.6 44 77.3
Sp6g14900 Schrenkiella parvula HOM05D000607 ORTHO05D010164 9.9e-10 66.6 44 79.5
AT5G52750 Arabidopsis thaliana HOM05D000607 ORTHO05D010164 2.2e-09 65.5 39 82.1
C02p19420 Brassica napus HOM05D000607 ORTHO05D010164 2.2e-09 65.5 41 82.9
BolC2t08077H Brassica oleracea HOM05D000607 ORTHO05D010164 2.2e-09 65.5 41 82.9
BcaC04g20551 Brassica carinata HOM05D000607 ORTHO05D010164 2.9e-09 65.1 44 70.5
A10p10240 Brassica napus HOM05D000607 ORTHO05D010164 2.9e-09 65.1 44 70.5
A10p10250 Brassica napus HOM05D000607 ORTHO05D010164 2.9e-09 65.1 44 70.5
C09p42230 Brassica napus HOM05D000607 ORTHO05D010164 2.9e-09 65.1 44 70.5
BolC9t57104H Brassica oleracea HOM05D000607 ORTHO05D010164 2.9e-09 65.1 44 70.5
BraA10t43103Z Brassica rapa HOM05D000607 ORTHO05D010164 2.9e-09 65.1 44 70.5
Aa31LG3G9010 Aethionema arabicum HOM05D000607 ORTHO05D010164 3.7e-09 64.7 45 68.9
AL8G27180 Arabidopsis lyrata HOM05D000607 ORTHO05D010164 3.7e-09 64.7 39 82.1
BcaC03g14503 Brassica carinata HOM05D000607 ORTHO05D010164 3.7e-09 64.7 41 82.9
C09p42340 Brassica napus HOM05D000607 ORTHO05D010164 3.7e-09 64.7 43 76.7
BolC9t57113H Brassica oleracea HOM05D000607 ORTHO05D010164 3.7e-09 64.7 43 76.7
BraA10t43102Z Brassica rapa HOM05D000607 ORTHO05D010164 3.7e-09 64.7 44 70.5
AL8G27200 Arabidopsis lyrata HOM05D000607 ORTHO05D010164 4.9e-09 64.3 39 76.9
Thhalv10014994m.g Eutrema salsugineum HOM05D000607 ORTHO05D010164 4.9e-09 64.3 39 84.6
Aa31LG3G8030 Aethionema arabicum HOM05D000607 ORTHO05D010164 8.3e-09 63.5 44 70.5
Aa31LG3G8040 Aethionema arabicum HOM05D000607 ORTHO05D010164 8.3e-09 63.5 46 65.2
BcaC04g20552 Brassica carinata HOM05D000607 ORTHO05D010164 8.3e-09 63.5 44 68.2
C09p42220 Brassica napus HOM05D000607 ORTHO05D010164 8.3e-09 63.5 44 68.2
BolC9t57103H Brassica oleracea HOM05D000607 ORTHO05D010164 8.3e-09 63.5 44 68.2
Aa31LG3G9000 Aethionema arabicum HOM05D000607 ORTHO05D010164 1.4e-08 62.8 49 61.2
BcaC04g20541 Brassica carinata HOM05D000607 ORTHO05D010164 2.4e-08 62.0 39 79.5
Aa31LG3G8050 Aethionema arabicum HOM05D000607 ORTHO05D010164 3.2e-08 61.6 42 69.0
Sp6g09500 Schrenkiella parvula HOM05D000607 ORTHO05D010164 4.1e-08 61.2 44 70.5
AT5G52760 Arabidopsis thaliana HOM05D000607 ORTHO05D010164 7.1e-08 60.5 39 74.4
Sp6g14910 Schrenkiella parvula HOM05D000607 ORTHO05D010164 1.2e-07 59.7 39 71.8
CARHR265700 Cardamine hirsuta HOM05D000607 ORTHO05D010164 1.6e-07 59.3 39 74.4
Aa31LG3G8020 Aethionema arabicum HOM05D000607 ORTHO05D010164 2.1e-07 58.9 40 67.5
Carub.0008s1290 Capsella rubella HOM05D000607 ORTHO05D010164 1.0e-06 56.6 41 73.2
Carub.0008s1292 Capsella rubella HOM05D000607 ORTHO05D010164 1.7e-06 55.8 33 78.8
Carub.0008s1291 Capsella rubella HOM05D000607 ORTHO05D010164 5.1e-06 54.3 33 75.8
Carub.0008s1289 Capsella rubella HOM05D000607 ORTHO05D010164 6.6e-06 53.9 32 78.1


User provided reference genes

Program Settings