Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 3.6e-61 238.0 117 100.0
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 6.5e-55 217.2 117 90.6
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 6.5e-55 217.2 117 90.6
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 8.0e-53 210.3 116 88.8
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 3.1e-49 198.4 119 84.0
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 2.7e-48 195.3 118 83.9
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 3.8e-47 191.4 119 80.7
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 5.0e-47 191.0 116 82.8
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 5.0e-47 191.0 116 82.8
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 6.5e-47 190.7 118 78.8
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 1.9e-46 189.1 116 81.9
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 1.9e-46 189.1 116 81.9
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 1.2e-45 186.4 116 80.2
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 9.1e-41 170.2 117 73.5
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 2.0e-35 152.5 118 69.5
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 5.7e-35 151.0 122 63.9
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 1.7e-34 149.4 120 63.3
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 2.2e-34 149.1 121 62.0
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 4.9e-34 147.9 121 64.5
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 8.3e-34 147.1 119 62.2
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 1.1e-33 146.7 121 61.2
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 1.8e-33 146.0 119 63.0
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 2.4e-33 145.6 120 62.5
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 2.4e-33 145.6 119 63.0
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 2.4e-33 145.6 121 62.0
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 3.1e-33 145.2 119 59.7
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 3.1e-33 145.2 119 66.4
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 4.1e-33 144.8 117 63.2
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 4.1e-33 144.8 117 63.2
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 4.1e-33 144.8 119 62.2
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 4.1e-33 144.8 119 61.3
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 5.4e-33 144.4 123 60.2
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 5.4e-33 144.4 121 62.0
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 5.4e-33 144.4 119 65.5
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 7.0e-33 144.1 120 62.5
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 7.0e-33 144.1 120 64.2
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 7.0e-33 144.1 117 66.7
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 7.0e-33 144.1 119 63.0
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 1.2e-32 143.3 119 62.2
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 1.2e-32 143.3 119 61.3
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 1.2e-32 143.3 120 60.0
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 1.6e-32 142.9 114 63.2
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 1.6e-32 142.9 119 65.5
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 2.0e-32 142.5 114 64.9
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 2.7e-32 142.1 120 58.3
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 3.5e-32 141.7 121 62.0
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 4.5e-32 141.4 121 60.3
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 4.5e-32 141.4 114 62.3
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 4.5e-32 141.4 114 64.0
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 4.5e-32 141.4 119 58.8
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 5.9e-32 141.0 130 57.7
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 5.9e-32 141.0 123 60.2
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 5.9e-32 141.0 119 58.8
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 7.8e-32 140.6 114 63.2
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 7.8e-32 140.6 122 59.0
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 7.8e-32 140.6 119 61.3
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 1.3e-31 139.8 119 59.7
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 1.3e-31 139.8 121 59.5
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 2.3e-31 139.0 123 60.2
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 2.9e-31 138.7 121 60.3
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 2.9e-31 138.7 127 59.1
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 3.8e-31 138.3 119 61.3
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 3.8e-31 138.3 133 56.4
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 3.8e-31 138.3 119 62.2
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 3.8e-31 138.3 126 58.7
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 5.0e-31 137.9 117 58.1
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 6.6e-31 137.5 121 62.0
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 8.6e-31 137.1 120 59.2
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 8.6e-31 137.1 121 60.3
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 8.6e-31 137.1 121 60.3
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 8.6e-31 137.1 125 59.2
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 1.1e-30 136.7 118 60.2
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 1.5e-30 136.3 114 63.2
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 2.5e-30 135.6 113 61.9
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 2.5e-30 135.6 134 56.0
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 2.5e-30 135.6 126 56.3
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 2.5e-30 135.6 129 55.0
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 2.5e-30 135.6 118 61.0
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 3.3e-30 135.2 119 58.0
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 5.6e-30 134.4 122 56.6
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 7.3e-30 134.0 123 59.3
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 9.5e-30 133.7 140 51.4
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 9.5e-30 133.7 124 58.1
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 9.5e-30 133.7 130 54.6
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.2e-29 133.3 118 60.2
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 1.2e-29 133.3 115 59.1
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 1.2e-29 133.3 118 60.2
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 2.1e-29 132.5 114 59.6
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 2.8e-29 132.1 123 56.9
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 3.6e-29 131.7 115 60.9
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 3.6e-29 131.7 119 56.3
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 4.7e-29 131.3 115 60.9
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 4.7e-29 131.3 115 60.9
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 6.1e-29 131.0 115 60.9
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 6.1e-29 131.0 115 60.9
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 1.0e-28 130.2 112 60.7
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 2.3e-28 129.0 121 54.5
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 3.0e-28 128.6 148 47.3
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 5.2e-28 127.9 113 60.2
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 6.8e-28 127.5 119 57.1
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.9e-26 122.1 113 59.3
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 1.2e-24 116.7 121 51.2
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 1.5e-22 109.8 127 50.4
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 1.6e-21 106.3 119 49.6
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 2.8e-21 105.5 77 68.8
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 1.8e-20 102.8 122 46.7
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 9.8e-19 97.1 129 45.7
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 1.9e-17 92.8 71 59.2
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 2.7e-16 89.0 120 39.2
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 2.5e-14 82.4 62 67.7
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 1.1e-12 77.0 121 37.2
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 1.4e-12 76.6 58 62.1
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 9.9e-11 70.5 58 53.4
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 1.7e-10 69.7 72 54.2
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 3.5e-08 62.0 108 35.2


User provided reference genes

Program Settings