Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR264900 Cardamine hirsuta HOM05D005755 ORTHO05D007006 9.6e-53 209.9 108 100.0
Sp6g14210 Schrenkiella parvula HOM05D005755 ORTHO05D007006 7.1e-48 193.7 108 90.7
AT5G51960 Arabidopsis thaliana HOM05D005755 ORTHO05D007006 3.0e-46 188.3 108 90.7
Thhalv10015092m.g Eutrema salsugineum HOM05D005755 ORTHO05D007006 4.3e-45 184.5 108 88.9
AL8G32330 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 2.1e-44 182.2 108 88.0
AL8G26290 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 6.9e-43 177.2 106 86.8
Carub.0008s1205 Capsella rubella HOM05D005755 ORTHO05D007006 1.2e-42 176.4 106 84.0
BcaC03g14561 Brassica carinata HOM05D005755 ORTHO05D007006 4.5e-42 174.5 107 86.0
C02p20090 Brassica napus HOM05D005755 ORTHO05D007006 4.5e-42 174.5 107 86.0
BcaB08g35550 Brassica carinata HOM05D005755 ORTHO05D007006 5.8e-42 174.1 108 86.1
BolC2t08139H Brassica oleracea HOM05D005755 ORTHO05D007006 5.8e-42 174.1 107 85.0
BraA02t06267Z Brassica rapa HOM05D005755 ORTHO05D007006 5.8e-42 174.1 104 88.5
A10p09750 Brassica napus HOM05D005755 ORTHO05D007006 6.5e-41 170.6 108 84.3
BraA10t43055Z Brassica rapa HOM05D005755 ORTHO05D007006 1.9e-40 169.1 108 83.3
BcaC04g20616 Brassica carinata HOM05D005755 ORTHO05D007006 3.2e-40 168.3 108 83.3
C09p41470 Brassica napus HOM05D005755 ORTHO05D007006 3.2e-40 168.3 108 83.3
BolC9t57024H Brassica oleracea HOM05D005755 ORTHO05D007006 3.2e-40 168.3 108 83.3
BcaB05g23952 Brassica carinata HOM05D005755 ORTHO05D007006 5.5e-40 167.5 104 83.7
Aa31LG7G12880 Aethionema arabicum HOM05D005755 ORTHO05D007006 2.7e-39 165.2 110 74.5
THA.LOC104799357 Tarenaya hassleriana HOM05D005755 ORTHO05D007006 5.1e-38 161.0 111 71.2
Dinv04676 Davidia involucrata HOM05D005755 ORTHO05D007006 2.4e-35 152.1 110 70.0
vmacro04890 Vaccinium macrocarpon HOM05D005755 ORTHO05D007006 3.1e-35 151.8 111 73.0
Ciclev10033129m.g Citrus clementina HOM05D005755 ORTHO05D007006 5.3e-35 151.0 111 66.7
Hma1.2p1_0157F.1_g068960 Hydrangea macrophylla HOM05D005755 ORTHO05D007006 1.2e-34 149.8 107 69.2
Peaxi162Scf00373g00210 Petunia axillaris HOM05D005755 ORTHO05D007006 2.0e-34 149.1 101 71.3
Peaxi162Scf00111g00718 Petunia axillaris HOM05D005755 ORTHO05D007006 3.4e-34 148.3 105 69.5
Dinv11808 Davidia involucrata HOM05D005755 ORTHO05D007006 5.9e-34 147.5 110 68.2
Thecc.10G068000 Theobroma cacao HOM05D005755 ORTHO05D007006 1.0e-33 146.7 112 67.0
ECA238G0308 Erigeron canadensis HOM05D005755 ORTHO05D007006 1.3e-33 146.4 108 67.6
Nn5g30302 Nelumbo nucifera HOM05D005755 ORTHO05D007006 1.3e-33 146.4 111 65.8
Eucgr.G02800 Eucalyptus grandis HOM05D005755 ORTHO05D007006 1.7e-33 146.0 111 65.8
Actinidia38859 Actinidia chinensis HOM05D005755 ORTHO05D007006 2.2e-33 145.6 108 64.8
DCAR_015273 Daucus carota HOM05D005755 ORTHO05D007006 2.2e-33 145.6 110 65.5
FAN10G3796 Fragaria x ananassa HOM05D005755 ORTHO05D007006 3.8e-33 144.8 111 69.4
CANSAT11G0923 Cannabis sativa HOM05D005755 ORTHO05D007006 5.0e-33 144.4 111 68.5
Oeu057236.1 Olea europaea HOM05D005755 ORTHO05D007006 5.0e-33 144.4 95 73.7
Cpa.g.sc53.20 Carica papaya HOM05D005755 ORTHO05D007006 6.5e-33 144.1 102 69.6
Sopen07g033930 Solanum pennellii HOM05D005755 ORTHO05D007006 6.5e-33 144.1 101 69.3
TAR381G1573 Trochodendron aralioides HOM05D005755 ORTHO05D007006 6.5e-33 144.1 111 64.0
Solyc07g065720.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 1.4e-32 142.9 100 70.0
Atru.chr12.636 Acer truncatum HOM05D005755 ORTHO05D007006 1.9e-32 142.5 109 64.2
FvH4_7g20160 Fragaria vesca HOM05D005755 ORTHO05D007006 1.9e-32 142.5 111 68.5
RcHm_v2.0_Chr1g0364121 Rosa chinensis HOM05D005755 ORTHO05D007006 1.9e-32 142.5 111 68.5
PGSC0003DMG400022164 Solanum tuberosum HOM05D005755 ORTHO05D007006 1.9e-32 142.5 101 68.3
Sopen04g020610 Solanum pennellii HOM05D005755 ORTHO05D007006 2.5e-32 142.1 101 67.3
CSS0044562 Camellia sinensis var. sinensis HOM05D005755 ORTHO05D007006 3.2e-32 141.7 108 67.6
Manes.10G042600 Manihot esculenta HOM05D005755 ORTHO05D007006 3.2e-32 141.7 109 64.2
Hund18453 Selenicereus undatus HOM05D005755 ORTHO05D007006 3.2e-32 141.7 111 63.1
Nitab4.5_0000061g0170 Nicotiana tabacum HOM05D005755 ORTHO05D007006 4.2e-32 141.4 101 66.3
Nitab4.5_0001721g0080 Nicotiana tabacum HOM05D005755 ORTHO05D007006 4.2e-32 141.4 103 65.0
Oeu017232.1 Olea europaea HOM05D005755 ORTHO05D007006 4.2e-32 141.4 95 71.6
Duzib106G1131 Durio zibethinus HOM05D005755 ORTHO05D007006 5.5e-32 141.0 110 62.7
FAN01G0677 Fragaria x ananassa HOM05D005755 ORTHO05D007006 7.2e-32 140.6 111 67.6
Lsat_1_v5_gn_2_46180 Lactuca sativa HOM05D005755 ORTHO05D007006 7.2e-32 140.6 109 61.5
PGR142G0594 Punica granatum HOM05D005755 ORTHO05D007006 7.2e-32 140.6 111 64.0
TWI15G0398 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 7.2e-32 140.6 109 67.0
CAN.G79.77 Capsicum annuum HOM05D005755 ORTHO05D007006 9.3e-32 140.2 101 66.3
Glyma.05G164400 Glycine max HOM05D005755 ORTHO05D007006 1.2e-31 139.8 111 65.8
Rhsim09G0154200 Rhododendron simsii HOM05D001639 ORTHO05D004140 1.2e-31 139.8 136 59.6
Cc00_g19060 Coffea canephora HOM05D005755 ORTHO05D007006 1.6e-31 139.4 113 61.1
Solyc04g049970.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 1.6e-31 139.4 100 67.0
Duzib114G0063 Durio zibethinus HOM05D005755 ORTHO05D007006 2.1e-31 139.0 110 61.8
Sc05g0001890 Simmondsia chinensis HOM05D005755 ORTHO05D007006 2.1e-31 139.0 111 60.4
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 2.1e-31 139.0 101 67.3
MSTRG.8164 Avicennia marina HOM05D005755 ORTHO05D007006 2.7e-31 138.7 101 66.3
Glyma.08G121800 Glycine max HOM05D005755 ORTHO05D007006 2.7e-31 138.7 111 64.9
Sed0018161 Sechium edule HOM05D005755 ORTHO05D007006 2.7e-31 138.7 111 63.1
EL10Ac6g13227 Beta vulgaris HOM05D005755 ORTHO05D007006 3.6e-31 138.3 109 62.4
Prupe.2G218600 Prunus persica HOM05D005755 ORTHO05D007006 3.6e-31 138.3 111 63.1
GSVIVG01016339001 Vitis vinifera HOM05D005755 ORTHO05D007006 3.6e-31 138.3 111 62.2
CiPaw.15G145100 Carya illinoinensis HOM05D005755 ORTHO05D007006 4.6e-31 137.9 111 65.8
CsaV3_3G030820 Cucumis sativus L. HOM05D005755 ORTHO05D007006 4.6e-31 137.9 111 63.1
Gohir.A01G133200 Gossypium hirsutum HOM05D005755 ORTHO05D007006 4.6e-31 137.9 110 60.9
MD07G1179300 Malus domestica HOM05D005755 ORTHO05D007006 4.6e-31 137.9 111 64.0
Gorai.002G143500 Gossypium raimondii HOM05D005755 ORTHO05D007006 7.9e-31 137.1 110 60.9
Potri.008G044200 Populus trichocarpa HOM05D005755 ORTHO05D007006 7.9e-31 137.1 111 60.4
Cfa019629 Carpinus fangiana HOM05D005755 ORTHO05D007006 1.0e-30 136.7 109 65.1
EL10Ac3g06003 Beta vulgaris HOM05D005755 ORTHO05D007006 1.4e-30 136.3 109 61.5
EL10Ac7g15953 Beta vulgaris HOM05D005755 ORTHO05D007006 1.4e-30 136.3 109 61.5
MD01G1131200 Malus domestica HOM05D005755 ORTHO05D007006 1.4e-30 136.3 111 63.1
TPR.G12499 Trifolium pratense HOM05D005755 ORTHO05D007006 1.4e-30 136.3 109 63.3
FAN06G3582 Fragaria x ananassa HOM05D005755 ORTHO05D007006 1.8e-30 136.0 109 65.1
Aqoxy3G01116 Aquilegia oxysepala HOM05D005755 ORTHO05D007006 2.3e-30 135.6 106 59.4
MBI19_g25006_MAGBIO Magnolia biondii HOM05D005755 ORTHO05D007006 3.0e-30 135.2 110 63.6
QL08p056843 Quercus lobata HOM05D005755 ORTHO05D007006 3.0e-30 135.2 109 63.3
Ca_19066_v3 Cicer arietinum L. HOM05D005755 ORTHO05D007006 8.8e-30 133.7 109 59.6
FAN03G2322 Fragaria x ananassa HOM05D005755 ORTHO05D007006 8.8e-30 133.7 106 67.0
Lalb_Chr07g0186081 Lupinus albus HOM05D005755 ORTHO05D007006 8.8e-30 133.7 113 61.9
Phvul.002G244400 Phaseolus vulgaris HOM05D005755 ORTHO05D007006 8.8e-30 133.7 111 59.5
Medtr6g068850 Medicago truncatula HOM05D005755 ORTHO05D007006 1.1e-29 133.3 109 61.5
HPP92_016041 Vanilla planifolia HOM05D005755 ORTHO05D007006 1.5e-29 132.9 111 62.2
Migut.F01798 Erythranthe guttata HOM05D005755 ORTHO05D007006 1.9e-29 132.5 101 64.4
Psat1g119080 Pisum sativum HOM05D005755 ORTHO05D007006 1.9e-29 132.5 109 62.4
SalBow1G5334 Salvia bowleyana HOM05D005755 ORTHO05D007006 2.5e-29 132.1 99 66.7
SalBow1G7067 Salvia bowleyana HOM05D005755 ORTHO05D007006 2.5e-29 132.1 99 66.7
EL10Ac7g17935 Beta vulgaris HOM05D005755 ORTHO05D007006 3.3e-29 131.7 97 66.0
CDE10G1261 Ceratophyllum demersum HOM05D005755 ORTHO05D007006 3.3e-29 131.7 111 58.6
TWI38G1562 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 3.3e-29 131.7 108 62.0
SalBow3G2244 Salvia bowleyana HOM05D005755 ORTHO05D007006 7.4e-29 130.6 99 65.7
SalBow3G3619 Salvia bowleyana HOM05D005755 ORTHO05D007006 7.4e-29 130.6 99 65.7
AUR62037483 Chenopodium quinoa HOM05D005755 ORTHO05D007006 1.7e-28 129.4 102 59.8
Sabra08G0030600 Salix brachista HOM05D005755 ORTHO05D007006 2.2e-28 129.0 109 57.8
Ah.04g160050 Amaranthus hybridus HOM05D005755 ORTHO05D007006 2.8e-28 128.6 107 58.9
AUR62004768 Chenopodium quinoa HOM05D005755 ORTHO05D007006 3.7e-28 128.3 109 56.9
Potri.010G217300 Populus trichocarpa HOM05D005755 ORTHO05D007006 4.8e-28 127.9 102 60.8
arahy.Tifrunner.gnm1.ann1.FL0JYU Arachis hypogaea HOM05D005755 ORTHO05D007006 6.3e-28 127.5 105 61.9
arahy.Tifrunner.gnm1.ann1.QA5RE0 Arachis hypogaea HOM05D005755 ORTHO05D007006 6.3e-28 127.5 105 61.9
EL10Ac5g11654 Beta vulgaris HOM05D005755 ORTHO05D007006 6.3e-28 127.5 95 66.3
ATR1096G048 Amborella trichopoda HOM05D005755 ORTHO05D007006 8.2e-28 127.1 104 64.4
Gohir.D01G118000 Gossypium hirsutum HOM05D005755 ORTHO05D007006 1.8e-27 125.9 128 52.3
Lj4g0006534 Lotus japonicus HOM05D005755 ORTHO05D007006 1.8e-27 125.9 111 59.5
PSO675G6920 Papaver somniferum HOM05D005755 ORTHO05D007006 5.3e-27 124.4 100 62.0
Os11g0133900 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 1.5e-26 122.9 96 64.6
VMungo0251G2378 Vigna mungo HOM05D001210 ORTHO05D001036 7.7e-26 120.6 106 57.5
SGA_v2.0_scaffold71G24037 Striga asiatica HOM05D005755 ORTHO05D007006 3.8e-25 118.2 96 59.4
unitig_8.g3685 Utricularia gibba HOM05D005755 ORTHO05D007006 6.5e-25 117.5 106 59.4
Zm00001eb235420 Zea mays HOM05D005755 ORTHO05D007006 2.5e-24 115.5 102 60.8
AL792U10010 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 9.4e-24 113.6 70 84.3
Zm00001eb163500 Zea mays HOM05D005755 ORTHO05D007006 1.6e-23 112.8 102 56.9
SEGI_41538 Sequoiadendron giganteum HOM05D005755 ORTHO05D007006 7.9e-23 110.5 102 52.9
Os12g0131266 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 1.3e-20 103.2 81 63.0
A02p12030 Brassica napus HOM05D005755 ORTHO05D007006 4.8e-20 101.3 68 77.9
Glyma.19G087500 Glycine max HOM05D005755 ORTHO05D007006 2.2e-17 92.4 76 63.2
TPR.G31353 Trifolium pratense HOM05D005755 ORTHO05D007006 2.2e-17 92.4 56 76.8
SMO207G0003 Selaginella moellendorffii HOM05D005755 ORTHO05D007006 2.5e-16 89.0 97 50.5
AagrBONN_evm.TU.Sc2ySwM_362.2659 Anthoceros agrestis HOM05D005755 ORTHO05D007006 5.5e-16 87.8 100 46.0
Mapoly0006s0175 Marchantia polymorpha HOM05D005755 ORTHO05D007006 1.4e-14 83.2 103 43.7
Pp3c3_10790 Physcomitrium patens HOM05D005755 ORTHO05D007006 3.9e-14 81.6 98 43.9
Oeu057237.1 Olea europaea HOM05D005755 ORTHO05D007006 1.1e-13 80.1 61 62.3
Haze_18895 Corylus avellana HOM05D005755 ORTHO05D007006 6.3e-12 74.3 86 51.2
HanXRQChr14g0436521 Helianthus annuus HOM05D005755 ORTHO05D007006 1.4e-11 73.2 72 44.4
Prupe.2G218400 Prunus persica HOM05D005755 ORTHO05D007006 5.3e-11 71.2 114 43.0
Lj3g0006677 Lotus japonicus HOM05D005755 ORTHO05D007006 2.6e-10 68.9 74 50.0
Lj3g0023846 Lotus japonicus HOM05D005755 ORTHO05D007006 6.5e-09 64.3 73 50.7


User provided reference genes

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