Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR264750 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.9e-40 166.8 80 100.0
AL8G39540 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.6e-20 102.4 79 65.8
AL8G39570 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.6e-20 102.4 79 65.8
Carub.0008s2334 Capsella rubella HOM05D000171 ORTHO05D000101 7.9e-20 100.1 79 60.8
Carub.0008s2333 Capsella rubella HOM05D000171 ORTHO05D000101 8.8e-19 96.7 78 61.5
AT5G62660 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.5e-18 95.9 79 59.5
AL8G39600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.7e-18 94.0 79 59.5
BolC2t12282H Brassica oleracea HOM05D000171 ORTHO05D000101 3.7e-17 91.3 79 57.0
C02p62250 Brassica napus HOM05D004904 ORTHO05D000101 8.2e-17 90.1 79 55.7
Carub.0008s2336 Capsella rubella HOM05D000171 ORTHO05D000101 1.1e-16 89.7 79 55.7
AL4G38850 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 9.1e-16 86.7 72 61.1
Carub.0008s2318 Capsella rubella HOM05D000171 ORTHO05D000101 1.6e-15 85.9 79 51.9
AL1G54860 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.0e-15 85.5 78 55.1
AT2G40910 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 4.5e-15 84.3 76 55.3
Carub.0004s2438 Capsella rubella HOM05D000171 ORTHO05D000101 5.9e-15 84.0 76 56.6
CARHR276200 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.2e-14 82.0 70 57.1
CARHR276430 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.2e-14 82.0 70 58.6
AL4G38860 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.9e-14 81.6 74 56.8
AL8G39400 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.8e-14 81.3 70 55.7
AT5G62510 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.8e-14 81.3 79 50.6
CARHR276420 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.8e-14 81.3 70 57.1
AL4G38870 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.0e-14 80.9 74 52.7
Thhalv10005275m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.1e-13 79.7 73 58.9
AT2G40920 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.5e-13 79.3 74 54.1
BcaC01g05368 Brassica carinata HOM05D000171 ORTHO05D000101 2.5e-13 78.6 74 52.7
Carub.0001s4456 Capsella rubella HOM05D000171 ORTHO05D000101 2.5e-13 78.6 78 51.3
C03p27380 Brassica napus HOM05D000171 ORTHO05D000101 7.2e-13 77.0 74 52.7
BolC3t15119H Brassica oleracea HOM05D000171 ORTHO05D000101 7.2e-13 77.0 74 52.7
BcaB01g03501 Brassica carinata HOM05D000171 ORTHO05D000101 9.4e-13 76.6 74 51.4
Carub.0008s2338 Capsella rubella HOM05D000171 ORTHO05D000101 9.4e-13 76.6 61 62.3
Carub.0008s2317 Capsella rubella HOM05D000171 ORTHO05D000101 1.6e-12 75.9 75 48.0
Thhalv10005397m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.6e-12 75.9 81 51.9
AT2G40925 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.1e-12 75.5 75 49.3
Carub.0004s2322 Capsella rubella HOM05D000171 ORTHO05D000101 2.7e-12 75.1 70 52.9
Thhalv10028181m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.7e-12 75.1 80 48.8
C03p27370 Brassica napus HOM05D000171 ORTHO05D000101 3.6e-12 74.7 74 51.4
BolC3t15117H Brassica oleracea HOM05D000171 ORTHO05D000101 3.6e-12 74.7 74 51.4
CARHR136020 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.1e-12 73.9 74 50.0
BcaC07g40028 Brassica carinata HOM05D000171 ORTHO05D000101 8.0e-12 73.6 72 50.0
BcaC07g40029 Brassica carinata HOM05D000171 ORTHO05D000101 8.0e-12 73.6 72 50.0
A03p23050 Brassica napus HOM05D000171 ORTHO05D000101 1.0e-11 73.2 80 50.0
BraA03t11528Z Brassica rapa HOM05D000171 ORTHO05D000101 1.0e-11 73.2 80 50.0
C09p10160 Brassica napus HOM05D000171 ORTHO05D000101 1.8e-11 72.4 79 51.9
BolC9t53915H Brassica oleracea HOM05D000171 ORTHO05D000101 1.8e-11 72.4 79 51.9
Thhalv10005666m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.8e-11 72.4 80 47.5
BcaB01g03499 Brassica carinata HOM05D000171 ORTHO05D000101 3.0e-11 71.6 70 51.4
Carub.0007s2126 Capsella rubella HOM05D000171 ORTHO05D000101 4.0e-11 71.2 74 50.0
Thhalv10004411m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.0e-11 71.2 74 51.4
BraA02t06939Z Brassica rapa HOM05D000171 ORTHO05D000101 5.2e-11 70.9 81 42.0
BcaC04g23284 Brassica carinata HOM05D000171 ORTHO05D000101 8.8e-11 70.1 79 50.6
Thhalv10011525m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 8.8e-11 70.1 78 44.9
Thhalv10012025m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 8.8e-11 70.1 78 44.9
BcaB04g21422 Brassica carinata HOM05D000635 ORTHO05D000101 1.1e-10 69.7 67 52.2
C03p27440 Brassica napus HOM05D000171 ORTHO05D000101 1.1e-10 69.7 74 47.3
BolC3t15121H Brassica oleracea HOM05D000171 ORTHO05D000101 1.1e-10 69.7 74 47.3
Sp4g23370 Schrenkiella parvula HOM05D000171 ORTHO05D000101 1.1e-10 69.7 75 45.3
AL4G31270 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.5e-10 69.3 81 43.2
BcaB01g03500 Brassica carinata HOM05D000171 ORTHO05D000101 1.5e-10 69.3 70 51.4
CARHR210940 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.5e-10 69.3 72 50.0
Thhalv10016561m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.5e-10 69.3 70 50.0
A08p00330 Brassica napus HOM05D000171 ORTHO05D000101 2.6e-10 68.6 78 43.6
CARHR226260 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.6e-10 68.6 70 48.6
CARHR226700 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.6e-10 68.6 70 48.6
Carub.0007s2124 Capsella rubella HOM05D000171 ORTHO05D000101 3.3e-10 68.2 71 46.5
Sp1g09440 Schrenkiella parvula HOM05D000171 ORTHO05D000101 3.3e-10 68.2 69 47.8
A02p19000 Brassica napus HOM05D000171 ORTHO05D000101 4.4e-10 67.8 81 40.7
C02p31520 Brassica napus HOM05D000171 ORTHO05D000101 4.4e-10 67.8 81 40.7
BcaC03g15472 Brassica carinata HOM05D000171 ORTHO05D000101 5.7e-10 67.4 81 40.7
C03p93170 Brassica napus HOM05D000171 ORTHO05D000101 7.5e-10 67.0 78 43.6
BolC9t57934H Brassica oleracea HOM05D000171 ORTHO05D000101 9.7e-10 66.6 72 48.6
BcaB06g26495 Brassica carinata HOM05D000171 ORTHO05D000101 1.3e-09 66.2 81 43.2
BcaC01g05366 Brassica carinata HOM05D000171 ORTHO05D000101 1.3e-09 66.2 74 45.9
AL7G33990 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.7e-09 65.9 69 47.8
AT4G19940 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.7e-09 65.9 71 45.1
A02p18980 Brassica napus HOM05D000171 ORTHO05D000101 2.2e-09 65.5 81 40.7
Thhalv10025237m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.2e-09 65.5 79 43.0
BcaNung03037 Brassica carinata HOM05D000171 ORTHO05D000101 2.8e-09 65.1 72 47.2
BraA02t06948Z Brassica rapa HOM05D000171 ORTHO05D000101 2.8e-09 65.1 72 44.4
CARHR276410 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.8e-09 65.1 68 50.0
BcaNung02552 Brassica carinata HOM05D000171 ORTHO05D000101 3.7e-09 64.7 78 44.9
BolC7t45551H Brassica oleracea HOM05D000171 ORTHO05D000101 3.7e-09 64.7 77 44.2
Carub.0005s0876 Capsella rubella HOM05D000171 ORTHO05D000101 3.7e-09 64.7 81 43.2
A02p18970 Brassica napus HOM05D000171 ORTHO05D000101 4.8e-09 64.3 70 47.1
C06p10670 Brassica napus HOM05D000171 ORTHO05D000101 4.8e-09 64.3 82 35.4
BolC6t36149H Brassica oleracea HOM05D000171 ORTHO05D000101 4.8e-09 64.3 82 35.4
CARHR049150 Cardamine hirsuta HOM05D000171 ORTHO05D000101 4.8e-09 64.3 58 53.4
AL8G39590 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 8.2e-09 63.5 47 61.7
BcaC04g19915 Brassica carinata HOM05D000171 ORTHO05D000101 1.1e-08 63.2 81 44.4
BcaC04g20172 Brassica carinata HOM05D000171 ORTHO05D000101 1.1e-08 63.2 81 44.4
BolC2t09183H Brassica oleracea HOM05D000171 ORTHO05D000101 1.4e-08 62.8 72 43.1
BraA06t23214Z Brassica rapa HOM05D000171 ORTHO05D000101 1.4e-08 62.8 82 35.4
BcaC02g07628 Brassica carinata HOM05D000171 ORTHO05D000101 1.8e-08 62.4 69 46.4
BraA10t43382Z Brassica rapa HOM05D000171 ORTHO05D000101 1.8e-08 62.4 81 43.2
AT4G19930 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.4e-08 62.0 76 44.7
BcaC08g43649 Brassica carinata HOM05D000171 ORTHO05D000101 2.4e-08 62.0 82 35.4
BcaNung02553 Brassica carinata HOM05D000171 ORTHO05D000101 2.4e-08 62.0 74 44.6
BcaC04g23280 Brassica carinata HOM05D000171 ORTHO05D000101 3.1e-08 61.6 73 46.6
C09p10210 Brassica napus HOM05D000171 ORTHO05D000101 3.1e-08 61.6 73 46.6
C09p10250 Brassica napus HOM05D000171 ORTHO05D000101 3.1e-08 61.6 73 46.6
BolC9t53923H Brassica oleracea HOM05D000171 ORTHO05D000101 3.1e-08 61.6 73 46.6
Sp1g05850 Schrenkiella parvula HOM05D000171 ORTHO05D000101 3.1e-08 61.6 78 35.9
BcaC06g30637 Brassica carinata HOM05D000171 ORTHO05D000101 5.3e-08 60.8 78 39.7
BolC7t45568H Brassica oleracea HOM05D000171 ORTHO05D000101 5.3e-08 60.8 78 39.7
BraA08t32678Z Brassica rapa HOM05D000171 ORTHO05D000101 7.0e-08 60.5 82 35.4
BraSC296t45960Z Brassica rapa HOM05D000171 ORTHO05D000101 7.0e-08 60.5 72 44.4
BolC7t45552H Brassica oleracea HOM05D000171 ORTHO05D000101 9.1e-08 60.1 78 42.3
Carub.0003s3064 Capsella rubella HOM05D000171 ORTHO05D000101 9.1e-08 60.1 78 42.3
BcaC07g38647 Brassica carinata HOM05D000171 ORTHO05D000101 1.6e-07 59.3 78 41.0
BolC8t49058H Brassica oleracea HOM05D000171 ORTHO05D000101 1.6e-07 59.3 78 41.0
BcaB03g13266 Brassica carinata HOM05D000171 ORTHO05D000101 2.7e-07 58.5 78 39.7
C08p14200 Brassica napus HOM05D000171 ORTHO05D000101 2.7e-07 58.5 78 41.0
BolC4t27998H Brassica oleracea HOM05D000748 ORTHO05D000101 2.7e-07 58.5 66 45.5
BcaC07g38624 Brassica carinata HOM05D000171 ORTHO05D000101 4.5e-07 57.8 78 38.5
Carub.0003s2519 Capsella rubella HOM05D000171 ORTHO05D000101 4.5e-07 57.8 80 42.5
BcaB03g13267 Brassica carinata HOM05D000171 ORTHO05D000101 7.7e-07 57.0 78 38.5
BolC8t49012H Brassica oleracea HOM05D000171 ORTHO05D000101 7.7e-07 57.0 78 39.7
C09p47030 Brassica napus HOM05D000171 ORTHO05D000101 1.0e-06 56.6 52 53.8
CARHR182090 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.0e-06 56.6 78 42.3
AT1G55947 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.7e-06 55.8 82 37.8
A08p33570 Brassica napus HOM05D000171 ORTHO05D000101 3.8e-06 54.7 78 38.5
Carub.0007s2125 Capsella rubella HOM05D000171 ORTHO05D000101 3.8e-06 54.7 76 40.8
BraA08t35273Z Brassica rapa HOM05D000171 ORTHO05D000101 6.5e-06 53.9 78 38.5


User provided reference genes

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