Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR264290 Cardamine hirsuta HOM05D006478 ORTHO05D008071 1.5e-84 316.2 171 100.0
AL8G25810 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 1.0e-77 293.5 171 89.5
AL64U10030 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 3.0e-77 292.0 171 88.9
AT5G51510 Arabidopsis thaliana HOM05D006478 ORTHO05D008071 6.8e-77 290.8 171 88.9
Thhalv10014843m.g Eutrema salsugineum HOM05D006478 ORTHO05D008071 1.2e-76 290.0 171 90.6
Carub.0008s1155 Capsella rubella HOM05D006478 ORTHO05D008071 9.8e-76 287.0 169 89.9
Sp6g13670 Schrenkiella parvula HOM05D006478 ORTHO05D008071 6.3e-75 284.3 168 89.3
BcaB08g35507 Brassica carinata HOM05D006478 ORTHO05D008071 8.9e-69 263.8 169 84.6
Aa31LG3G7930 Aethionema arabicum HOM05D006478 ORTHO05D008071 4.4e-68 261.5 201 73.6
BcaC04g20665 Brassica carinata HOM05D006478 ORTHO05D008071 7.5e-68 260.8 169 83.4
C09p40820 Brassica napus HOM05D006478 ORTHO05D008071 7.5e-68 260.8 169 83.4
BolC9t56962H Brassica oleracea HOM05D006478 ORTHO05D008071 7.5e-68 260.8 169 83.4
A10p09440 Brassica napus HOM05D006478 ORTHO05D008071 1.1e-66 256.9 171 81.3
BraA10t43020Z Brassica rapa HOM05D006478 ORTHO05D008071 1.1e-66 256.9 171 81.3
THA.LOC104811518 Tarenaya hassleriana HOM05D006478 ORTHO05D008071 7.3e-55 217.6 168 69.6
Potri.012G127100 Populus trichocarpa HOM05D006478 ORTHO05D008071 1.2e-36 157.1 173 53.2
MD07G1255100 Malus domestica HOM05D006478 ORTHO05D008071 4.4e-36 155.2 173 50.3
TWI23G1172 Tripterygium wilfordii HOM05D006478 ORTHO05D008071 9.9e-36 154.1 173 53.2
Ciclev10006041m.g Citrus clementina HOM05D006478 ORTHO05D008071 1.7e-35 153.3 174 52.3
CSS0006490 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 8.4e-35 151.0 176 50.6
Prupe.2G278900 Prunus persica HOM05D006478 ORTHO05D008071 1.1e-34 150.6 173 49.7
Sabra12G0096300 Salix brachista HOM05D006478 ORTHO05D008071 1.4e-34 150.2 173 51.4
PGR042G2342 Punica granatum HOM05D006478 ORTHO05D008071 1.6e-33 146.7 171 49.7
CSS0007785 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 2.1e-33 146.4 176 50.0
Dinv22954 Davidia involucrata HOM05D006478 ORTHO05D008071 3.5e-33 145.6 175 49.1
Manes.14G035000 Manihot esculenta HOM05D006478 ORTHO05D008071 4.6e-33 145.2 173 50.9
CANSAT56G4273 Cannabis sativa HOM05D006478 ORTHO05D008071 6.0e-33 144.8 173 48.0
Os10g0508600 Oryza sativa ssp. japonica HOM05D006478 ORTHO05D008071 6.0e-33 144.8 173 48.6
CiPaw.04G061000 Carya illinoinensis HOM05D006478 ORTHO05D008071 1.0e-32 144.1 173 48.0
Actinidia31787 Actinidia chinensis HOM05D006478 ORTHO05D008071 5.1e-32 141.7 175 47.4
Atru.chr1.683 Acer truncatum HOM05D006478 ORTHO05D008071 8.7e-32 141.0 174 49.4
GSVIVG01018613001 Vitis vinifera HOM05D006478 ORTHO05D008071 8.7e-32 141.0 175 50.9
Dinv28557 Davidia involucrata HOM05D000120 ORTHO05D000068 2.5e-31 139.4 164 50.0
MELO3C006818.2 Cucumis melo HOM05D006478 ORTHO05D008071 4.3e-31 138.7 173 49.1
CsaV3_3G016200 Cucumis sativus L. HOM05D006478 ORTHO05D008071 5.6e-31 138.3 173 49.1
Nitab4.5_0001383g0120 Nicotiana tabacum HOM05D006478 ORTHO05D008071 5.6e-31 138.3 171 48.0
MSTRG.8414 Avicennia marina HOM05D006478 ORTHO05D008071 9.6e-31 137.5 173 48.0
DCAR_018100 Daucus carota HOM05D006478 ORTHO05D008071 9.6e-31 137.5 173 46.2
QL09p018992 Quercus lobata HOM05D006478 ORTHO05D008071 9.6e-31 137.5 172 48.3
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 1.3e-30 137.1 173 48.0
Sed0002492 Sechium edule HOM05D006478 ORTHO05D008071 4.8e-30 135.2 173 48.6
Cc07_g16780 Coffea canephora HOM05D006478 ORTHO05D008071 6.2e-30 134.8 173 46.8
RcHm_v2.0_Chr4g0413311 Rosa chinensis HOM05D006478 ORTHO05D008071 6.2e-30 134.8 174 44.3
FAN12G3923 Fragaria x ananassa HOM05D006478 ORTHO05D008071 8.1e-30 134.4 173 44.5
Migut.O00298 Erythranthe guttata HOM05D006478 ORTHO05D008071 2.4e-29 132.9 172 45.9
HanXRQChr13g0420601 Helianthus annuus HOM05D006478 ORTHO05D008071 3.1e-29 132.5 173 42.2
Lsat_1_v5_gn_8_8920 Lactuca sativa HOM05D006478 ORTHO05D008071 9.0e-29 131.0 173 45.1
Atru.chr12.858 Acer truncatum HOM05D006478 ORTHO05D008071 1.2e-28 130.6 124 58.9
FAN17G1857 Fragaria x ananassa HOM05D006478 ORTHO05D008071 1.2e-28 130.6 173 43.4
DCAR_028724 Daucus carota HOM05D006478 ORTHO05D008071 1.5e-28 130.2 175 45.1
FvH4_4g13180 Fragaria vesca HOM05D006478 ORTHO05D008071 1.5e-28 130.2 173 43.4
AUR62002188 Chenopodium quinoa HOM05D006478 ORTHO05D008071 3.4e-28 129.0 175 43.4
Nn6g34073 Nelumbo nucifera HOM05D006478 ORTHO05D008071 3.4e-28 129.0 178 48.3
EL10Ac3g05828 Beta vulgaris HOM05D006478 ORTHO05D008071 4.5e-28 128.6 175 44.0
AUR62015523 Chenopodium quinoa HOM05D006478 ORTHO05D008071 4.5e-28 128.6 175 43.4
SalBow5G4313 Salvia bowleyana HOM05D006478 ORTHO05D008071 4.5e-28 128.6 173 45.7
CAN.G645.17 Capsicum annuum HOM05D006478 ORTHO05D008071 9.9e-28 127.5 171 44.4
Cfa008204 Carpinus fangiana HOM05D006478 ORTHO05D008071 9.9e-28 127.5 173 47.4
SalBow5G3546 Salvia bowleyana HOM05D006478 ORTHO05D008071 1.3e-27 127.1 173 45.1
Sopen11g002780 Solanum pennellii HOM05D006478 ORTHO05D008071 1.3e-27 127.1 171 44.4
Hma1.2p1_0146F.1_g065730 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 1.7e-27 126.7 180 43.9
Eucgr.A02884 Eucalyptus grandis HOM05D006478 ORTHO05D008071 2.2e-27 126.3 173 42.8
Duzib213G0671 Durio zibethinus HOM05D006478 ORTHO05D008071 2.9e-27 125.9 173 43.9
Zm00001eb043910 Zea mays HOM05D006478 ORTHO05D008071 2.9e-27 125.9 171 44.4
Thecc.07G184100 Theobroma cacao HOM05D006478 ORTHO05D008071 4.9e-27 125.2 173 42.8
ECA233G2919 Erigeron canadensis HOM05D006478 ORTHO05D008071 6.4e-27 124.8 173 41.0
Sc19g0001980 Simmondsia chinensis HOM05D006478 ORTHO05D008071 1.1e-26 124.0 175 43.4
ECA247G1821 Erigeron canadensis HOM05D006478 ORTHO05D008071 7.1e-26 121.3 171 40.9
TAR629G1779 Trochodendron aralioides HOM05D006478 ORTHO05D008071 7.1e-26 121.3 139 48.9
PSO782G1599 Papaver somniferum HOM05D006478 ORTHO05D008071 1.2e-25 120.6 164 45.1
PSO170G1682 Papaver somniferum HOM05D006478 ORTHO05D008071 2.7e-25 119.4 164 44.5
Gohir.D01G083500 Gossypium hirsutum HOM05D006478 ORTHO05D008071 3.5e-25 119.0 173 43.4
Gorai.002G109200 Gossypium raimondii HOM05D006478 ORTHO05D008071 3.5e-25 119.0 173 43.4
Psat2g100400 Pisum sativum HOM05D006478 ORTHO05D008071 4.6e-25 118.6 181 44.2
TPR.G3657 Trifolium pratense HOM05D006478 ORTHO05D008071 6.0e-25 118.2 181 45.9
vmacro09898 Vaccinium macrocarpon HOM05D006478 ORTHO05D008071 1.0e-24 117.5 166 45.2
arahy.Tifrunner.gnm1.ann1.R2ZWGQ Arachis hypogaea HOM05D006478 ORTHO05D008071 1.8e-24 116.7 181 41.4
Gohir.A01G099000 Gossypium hirsutum HOM05D006478 ORTHO05D008071 1.8e-24 116.7 173 42.2
FAN07G1397 Fragaria x ananassa HOM05D006478 ORTHO05D008071 6.7e-24 114.8 139 46.0
Medtr3g075310 Medicago truncatula HOM05D006478 ORTHO05D008071 8.7e-24 114.4 181 44.2
SGA_v2.0_scaffold10G05491 Striga asiatica HOM05D006478 ORTHO05D008071 4.3e-23 112.1 173 42.8
HPP92_021027 Vanilla planifolia HOM05D006478 ORTHO05D008071 7.4e-23 111.3 169 43.8
Ca_03612_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 1.6e-22 110.2 185 40.5
Glyma.18G235100 Glycine max HOM05D006478 ORTHO05D008071 1.6e-22 110.2 181 39.2
Hma1.2p1_0654F.1_g196670 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 2.8e-22 109.4 180 39.4
Phvul.011G177900 Phaseolus vulgaris HOM05D006478 ORTHO05D008071 2.8e-22 109.4 180 40.6
Psat3g066720 Pisum sativum HOM05D006478 ORTHO05D008071 3.7e-22 109.0 180 41.7
Lalb_Chr19g0140371 Lupinus albus HOM05D006478 ORTHO05D008071 8.1e-22 107.8 182 40.1
Peaxi162Scf00241g00526 Petunia axillaris HOM05D006478 ORTHO05D008071 1.1e-21 107.5 147 44.9
Glyma.09G257500 Glycine max HOM05D006478 ORTHO05D008071 1.4e-21 107.1 123 46.3
arahy.Tifrunner.gnm1.ann1.LW4644 Arachis hypogaea HOM05D006478 ORTHO05D008071 1.8e-21 106.7 109 52.3
Lj6g0019546 Lotus japonicus HOM05D006478 ORTHO05D008071 1.2e-20 104.0 181 39.8
ATR0049G082 Amborella trichopoda HOM05D006478 ORTHO05D008071 1.3e-19 100.5 112 49.1
PGSC0003DMG400023983 Solanum tuberosum HOM05D006478 ORTHO05D008071 2.2e-19 99.8 174 41.4
CDE02G0477 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 8.4e-19 97.8 121 43.8
CDE11G0941 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 1.4e-18 97.1 110 48.2
Aqoxy3G03162 Aquilegia oxysepala HOM05D006478 ORTHO05D008071 1.9e-18 96.7 173 35.3
Haze_13851 Corylus avellana HOM05D006478 ORTHO05D008071 1.3e-16 90.5 173 40.5
Rhsim09G0192300 Rhododendron simsii HOM05D006478 ORTHO05D008071 1.8e-16 90.1 140 44.3
unitig_8.g3700 Utricularia gibba HOM05D006478 ORTHO05D008071 4.5e-12 75.5 145 35.9
Hund04605 Selenicereus undatus HOM05D006478 ORTHO05D008071 7.6e-12 74.7 133 36.8
Mapoly0022s0103 Marchantia polymorpha HOM05D006478 ORTHO05D008071 1.0e-11 74.3 172 33.7
Ca_10075_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 3.8e-11 72.4 86 44.2
Manes.03G110816 Manihot esculenta HOM05D006478 ORTHO05D008071 1.1e-10 70.9 47 78.7
CBR_g39926 Chara braunii HOM05D006478 ORTHO05D008071 7.1e-10 68.2 190 31.1
Pp3c3_28350 Physcomitrium patens HOM05D006478 ORTHO05D008071 1.2e-09 67.4 104 38.5
RcHm_v2.0_Chr4g0409771 Rosa chinensis HOM05D006478 ORTHO05D008071 2.1e-09 66.6 114 35.1
Prupe.2G279400 Prunus persica HOM05D006478 ORTHO05D008071 1.0e-08 64.3 77 42.9
Sed0011118 Sechium edule HOM05D006478 ORTHO05D008071 5.7e-07 58.5 173 30.6
Lj1g0017005 Lotus japonicus HOM05D006478 ORTHO05D008071 7.4e-07 58.2 144 33.3
TAR125G0001 Trochodendron aralioides HOM05D006478 ORTHO05D008071 7.4e-07 58.2 165 28.5
HPP92_020994 Vanilla planifolia HOM05D006478 ORTHO05D008071 2.2e-06 56.6 101 38.6
Medtr1g069420 Medicago truncatula HOM05D002356 ORTHO05D002546 8.2e-06 54.7 94 36.2


User provided reference genes

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