Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR263810 Cardamine hirsuta HOM05D004730 ORTHO05D005705 2.0e-33 145.2 76 100.0
CARHR172020 Cardamine hirsuta HOM05D004730 ORTHO05D005705 4.7e-14 80.9 114 49.1
Thhalv10005894m.g Eutrema salsugineum HOM05D004730 ORTHO05D005705 2.4e-13 78.6 111 48.6
Carub.0003s3432 Capsella rubella HOM05D004730 ORTHO05D005705 1.2e-12 76.3 111 49.5
Carub.0005s2846 Capsella rubella HOM05D004730 ORTHO05D005705 1.2e-12 76.3 111 49.5
Sp5g01680 Schrenkiella parvula HOM05D004730 ORTHO05D005705 1.5e-12 75.9 112 49.1
AT3G61710 Arabidopsis thaliana HOM05D004730 ORTHO05D005705 3.4e-12 74.7 113 48.7
BraA07t30209Z Brassica rapa HOM05D004730 ORTHO05D005705 3.4e-12 74.7 117 47.0
Aa31LG10G15710 Aethionema arabicum HOM05D004730 ORTHO05D005705 4.4e-12 74.3 111 47.7
AL5G44220 Arabidopsis lyrata HOM05D004730 ORTHO05D005705 5.8e-12 73.9 111 48.6
A07p25690 Brassica napus HOM05D004730 ORTHO05D005705 7.6e-12 73.6 117 46.2
BcaC08g45152 Brassica carinata HOM05D004730 ORTHO05D005705 2.4e-10 68.6 117 45.3
C06p27700 Brassica napus HOM05D004730 ORTHO05D005705 2.4e-10 68.6 117 45.3
C06p27860 Brassica napus HOM05D004730 ORTHO05D005705 2.4e-10 68.6 117 45.3
BolC6t37941H Brassica oleracea HOM05D004730 ORTHO05D005705 2.4e-10 68.6 117 45.3
THA.LOC104817359 Tarenaya hassleriana HOM05D004730 ORTHO05D005705 3.2e-10 68.2 111 43.2
C06p27850 Brassica napus HOM05D004730 ORTHO05D006825 2.1e-09 65.5 113 44.2
C06p27910 Brassica napus HOM05D000590 ORTHO05D006825 2.1e-09 65.5 113 44.2
BolC6t37951H Brassica oleracea HOM05D004730 ORTHO05D005705 2.1e-09 65.5 113 44.2
Aa31LG1G27820 Aethionema arabicum HOM05D004730 ORTHO05D005705 6.0e-09 63.9 112 43.8
CiPaw.01G075800 Carya illinoinensis HOM05D004730 ORTHO05D005705 1.1e-07 59.7 111 41.4
arahy.Tifrunner.gnm1.ann1.EBD5YY Arachis hypogaea HOM05D004730 ORTHO05D005705 2.5e-07 58.5 109 43.1
PGR031G3931 Punica granatum HOM05D004730 ORTHO05D005705 4.3e-07 57.8 112 41.1
arahy.Tifrunner.gnm1.ann1.DU0G1C Arachis hypogaea HOM05D004730 ORTHO05D005705 5.6e-07 57.4 109 42.2
Medtr3g018770 Medicago truncatula HOM05D004730 ORTHO05D005705 9.6e-07 56.6 106 42.5
COL.COLO4_06293 Corchorus olitorius HOM05D004730 ORTHO05D005705 1.6e-06 55.8 112 41.1
Thecc.01G343400 Theobroma cacao HOM05D004730 ORTHO05D005705 1.6e-06 55.8 112 41.1
Ca_26857_v3 Cicer arietinum L. HOM05D004730 ORTHO05D005705 2.1e-06 55.5 106 42.5
Duzib138G0598 Durio zibethinus HOM05D004730 ORTHO05D005705 2.8e-06 55.1 111 40.5
PGR031G3051 Punica granatum HOM05D004730 ORTHO05D005705 3.6e-06 54.7 112 39.3
VMungo1080G1812 Vigna mungo HOM05D004730 ORTHO05D005705 3.6e-06 54.7 111 38.7
Cpa.g.sc96.6 Carica papaya HOM05D004730 ORTHO05D005705 8.1e-06 53.5 115 39.1
Psat5g217520 Pisum sativum HOM05D004730 ORTHO05D005705 8.1e-06 53.5 107 40.2


User provided reference genes

Program Settings