Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR261650 Cardamine hirsuta HOM05D000171 ORTHO05D000101 4.8e-38 160.6 78 100.0
CARHR261700 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.3e-16 88.6 65 64.6
CARHR261680 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.2e-15 86.3 67 64.2
C03p65570 Brassica napus HOM05D000171 ORTHO05D000101 6.3e-14 80.5 61 59.0
BcaB02g10631 Brassica carinata HOM05D000171 ORTHO05D000101 1.4e-13 79.3 64 53.1
Thhalv10011121m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.4e-13 78.6 61 54.1
BcaB05g24068 Brassica carinata HOM05D000171 ORTHO05D000101 5.4e-13 77.4 65 50.8
A06p18280 Brassica napus HOM05D000171 ORTHO05D000101 5.4e-13 77.4 65 50.8
BraA06t24911Z Brassica rapa HOM05D000171 ORTHO05D000101 5.4e-13 77.4 65 50.8
A06p18290 Brassica napus HOM05D000171 ORTHO05D000101 7.0e-13 77.0 62 53.2
BraA06t24912Z Brassica rapa HOM05D000171 ORTHO05D000101 7.0e-13 77.0 62 53.2
Sp5g12630 Schrenkiella parvula HOM05D000171 ORTHO05D000101 9.2e-13 76.6 60 58.3
C08p24500 Brassica napus HOM05D000171 ORTHO05D000101 1.2e-12 76.3 65 49.2
BolC8t50068H Brassica oleracea HOM05D000171 ORTHO05D000101 1.6e-12 75.9 65 49.2
BcaB01g00708 Brassica carinata HOM05D000171 ORTHO05D000101 2.0e-12 75.5 64 48.4
BcaB02g09590 Brassica carinata HOM05D000171 ORTHO05D000101 2.0e-12 75.5 62 50.0
C08p24480 Brassica napus HOM05D000171 ORTHO05D000101 2.0e-12 75.5 62 51.6
BolC8t50066H Brassica oleracea HOM05D000171 ORTHO05D000101 2.0e-12 75.5 62 51.6
BcaC07g39412 Brassica carinata HOM05D000171 ORTHO05D000101 2.7e-12 75.1 65 49.2
BolC8t50065H Brassica oleracea HOM05D000171 ORTHO05D000101 1.3e-11 72.8 62 53.2
Carub.0005s1563 Capsella rubella HOM05D000171 ORTHO05D000101 1.3e-11 72.8 62 54.8
AL5G29234 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.3e-11 72.0 60 53.3
CARHR158400 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.6e-11 70.5 60 56.7
Aa31LG1G23370 Aethionema arabicum HOM05D000171 ORTHO05D000101 8.6e-11 70.1 59 52.5
Thhalv10019719m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 8.6e-11 70.1 62 48.4
Carub.0005s1560 Capsella rubella HOM05D000171 ORTHO05D000101 1.5e-10 69.3 51 58.8
Carub.0005s1577 Capsella rubella HOM05D000171 ORTHO05D000101 1.5e-10 69.3 51 58.8
C08p24470 Brassica napus HOM05D000171 ORTHO05D000101 1.9e-10 68.9 62 51.6
AT3G49440 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.3e-10 68.2 62 51.6
BcaB01g00705 Brassica carinata HOM05D000171 ORTHO05D000101 3.3e-10 68.2 66 47.0
BraA05t20785Z Brassica rapa HOM05D000171 ORTHO05D000101 5.6e-10 67.4 62 50.0
Carub.0005s1579 Capsella rubella HOM05D000171 ORTHO05D000101 9.5e-10 66.6 51 51.0
Carub.0001s0357 Capsella rubella HOM05D000171 ORTHO05D000101 2.1e-09 65.5 62 41.9
Carub.0005s1580 Capsella rubella HOM05D000171 ORTHO05D000101 2.8e-09 65.1 56 51.8
Carub.0001s2950 Capsella rubella HOM05D000171 ORTHO05D000101 3.6e-09 64.7 65 40.0
BcaC01g05920 Brassica carinata HOM05D000171 ORTHO05D000101 4.7e-09 64.3 62 43.5
BcaC03g14815 Brassica carinata HOM05D000171 ORTHO05D000101 4.7e-09 64.3 68 41.2
C03p21070 Brassica napus HOM05D000171 ORTHO05D000101 4.7e-09 64.3 62 43.5
BolC3t14489H Brassica oleracea HOM05D000171 ORTHO05D000101 4.7e-09 64.3 62 43.5
AL1G45620 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 6.2e-09 63.9 65 40.0
A02p14060 Brassica napus HOM05D000171 ORTHO05D000101 6.2e-09 63.9 68 42.6
BraA02t06469Z Brassica rapa HOM05D000171 ORTHO05D000101 6.2e-09 63.9 68 42.6
AL5G29210 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 8.0e-09 63.5 60 46.7
AT3G49450 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 8.0e-09 63.5 51 54.9
C09p71110 Brassica napus HOM05D000171 ORTHO05D000101 8.0e-09 63.5 62 41.9
BolC2t08420H Brassica oleracea HOM05D000171 ORTHO05D000101 8.0e-09 63.5 68 41.2
Sp4g14420 Schrenkiella parvula HOM05D000171 ORTHO05D000101 8.0e-09 63.5 61 47.5
CARHR030590 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.4e-08 62.8 65 38.5
AL1G46260 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.8e-08 62.4 60 48.3
AL1G62520 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.8e-08 62.4 61 44.3
Thhalv10019545m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.8e-08 62.4 62 43.5
AL1G61850 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.3e-08 62.0 66 45.5
A10p30640 Brassica napus HOM05D000171 ORTHO05D000101 3.1e-08 61.6 62 40.3
C06p14150 Brassica napus HOM05D000171 ORTHO05D000101 3.1e-08 61.6 55 50.9
BolC6t36593H Brassica oleracea HOM05D000171 ORTHO05D000101 3.1e-08 61.6 55 50.9
C02p22670 Brassica napus HOM05D000171 ORTHO05D000101 4.0e-08 61.2 68 41.2
Carub.0005s1324 Capsella rubella HOM05D000171 ORTHO05D000101 4.0e-08 61.2 64 51.6
AL5G29220 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.2e-08 60.8 62 46.8
AL5G29232 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.2e-08 60.8 62 46.8
BcaB01g03998 Brassica carinata HOM05D000171 ORTHO05D000101 5.2e-08 60.8 62 41.9
C05p02780 Brassica napus HOM05D000171 ORTHO05D000101 5.2e-08 60.8 57 38.6
BolC5t29060H Brassica oleracea HOM05D000171 ORTHO05D000101 5.2e-08 60.8 57 38.6
BolC9t59874H Brassica oleracea HOM05D000171 ORTHO05D000101 5.2e-08 60.8 62 40.3
Carub.0001s3230 Capsella rubella HOM05D000171 ORTHO05D000101 5.2e-08 60.8 69 36.2
Thhalv10012287m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.2e-08 60.8 64 39.1
Thhalv10019461m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.2e-08 60.8 67 38.8
A02p14050 Brassica napus HOM05D000171 ORTHO05D000101 6.8e-08 60.5 68 39.7
BraA02t06466Z Brassica rapa HOM05D000171 ORTHO05D000101 6.8e-08 60.5 68 39.7
CARHR042940 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.8e-08 60.5 58 50.0
CARHR219450 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.8e-08 60.5 68 44.1
Thhalv10012359m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 8.9e-08 60.1 62 37.1
Sp3g17210 Schrenkiella parvula HOM05D000171 ORTHO05D000101 8.9e-08 60.1 61 50.8
BcaB03g15211 Brassica carinata HOM05D000171 ORTHO05D000101 1.5e-07 59.3 80 35.0
C09p71120 Brassica napus HOM05D000171 ORTHO05D000101 1.5e-07 59.3 63 41.3
AT1G53360 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.0e-07 58.9 66 40.9
Carub.0003s2951 Capsella rubella HOM05D000171 ORTHO05D000101 2.0e-07 58.9 63 39.7
Carub.0004s1336 Capsella rubella HOM05D000171 ORTHO05D000101 2.0e-07 58.9 62 43.5
Thhalv10009318m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.0e-07 58.9 63 38.1
Thhalv10011009m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.0e-07 58.9 64 46.9
C04p18490 Brassica napus HOM05D000171 ORTHO05D000101 2.6e-07 58.5 60 41.7
Thhalv10006428m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.6e-07 58.5 65 38.5
AL1G53100 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.4e-07 58.2 62 35.5
AL2G14000 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.4e-07 58.2 62 38.7
BraA01t01331Z Brassica rapa HOM05D000171 ORTHO05D000101 3.4e-07 58.2 64 45.3
AL1G63830 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.4e-07 57.8 65 43.1
A05p17940 Brassica napus HOM05D000171 ORTHO05D000101 4.4e-07 57.8 72 38.9
Carub.0004s0507 Capsella rubella HOM05D000171 ORTHO05D000101 4.4e-07 57.8 66 37.9
Thhalv10011044m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.4e-07 57.8 65 46.2
Aa31LG10G1480 Aethionema arabicum HOM05D000171 ORTHO05D000101 5.8e-07 57.4 59 45.8
AT2G19630 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 5.8e-07 57.4 66 37.9
BcaB05g24245 Brassica carinata HOM05D000171 ORTHO05D000101 5.8e-07 57.4 70 40.0
Thhalv10022199m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.8e-07 57.4 59 45.8
BcaB05g21705 Brassica carinata HOM05D000171 ORTHO05D000101 7.5e-07 57.0 64 37.5
BcaB06g28423 Brassica carinata HOM05D000171 ORTHO05D000101 7.5e-07 57.0 62 41.9
Thhalv10012153m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.5e-07 57.0 60 45.0
AL4G16810 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 9.8e-07 56.6 66 39.4
AL5G12490 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 9.8e-07 56.6 65 43.1
AT2G02890 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 9.8e-07 56.6 65 44.6
BolC3t13623H Brassica oleracea HOM05D000171 ORTHO05D000101 9.8e-07 56.6 65 41.5
Carub.0001s3050 Capsella rubella HOM05D000171 ORTHO05D000101 9.8e-07 56.6 62 41.9
Carub.0004s0542 Capsella rubella HOM05D000171 ORTHO05D000101 9.8e-07 56.6 66 39.4
Thhalv10017547m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 9.8e-07 56.6 57 45.6
AL1G45570 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.3e-06 56.2 65 36.9
AL1G45600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.3e-06 56.2 65 36.9
AL2G14020 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.3e-06 56.2 61 37.7
AT1G67130 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.3e-06 56.2 78 34.6
Carub.0003s2952 Capsella rubella HOM05D000171 ORTHO05D000101 1.3e-06 56.2 64 40.6
CARHR126110 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.3e-06 56.2 65 36.9
AT2G15640 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.7e-06 55.8 65 41.5
BcaC08g44127 Brassica carinata HOM05D000171 ORTHO05D000101 1.7e-06 55.8 72 38.9
Thhalv10011995m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.7e-06 55.8 70 37.1
AL1G45350 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.2e-06 55.5 61 39.3
AL5G12480 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.2e-06 55.5 65 41.5
AL5G43600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.2e-06 55.5 65 36.9
AT2G16220 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.2e-06 55.5 80 35.0
A04p22560 Brassica napus HOM05D000171 ORTHO05D000101 2.2e-06 55.5 59 33.9
C04p61700 Brassica napus HOM05D000171 ORTHO05D000101 2.2e-06 55.5 66 37.9
C04p61720 Brassica napus HOM05D000171 ORTHO05D000101 2.2e-06 55.5 66 37.9
CARHR288800 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.2e-06 55.5 64 37.5
Thhalv10012093m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.2e-06 55.5 70 37.1
AT1G53370 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.9e-06 55.1 61 45.9
A04p23920 Brassica napus HOM05D000171 ORTHO05D000101 2.9e-06 55.1 57 42.1
A05p13520 Brassica napus HOM05D000171 ORTHO05D000101 2.9e-06 55.1 61 37.7
BraA04t17916Z Brassica rapa HOM05D000171 ORTHO05D000101 2.9e-06 55.1 57 42.1
BraA05t20289Z Brassica rapa HOM05D000171 ORTHO05D000101 2.9e-06 55.1 61 37.7
Carub.0001s2934 Capsella rubella HOM05D000171 ORTHO05D000101 2.9e-06 55.1 65 40.0
Thhalv10028042m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.9e-06 55.1 59 40.7
AL1G45560 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.7e-06 54.7 67 34.3
AL1G45590 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.7e-06 54.7 67 34.3
BcaB05g24243 Brassica carinata HOM05D000171 ORTHO05D000101 3.7e-06 54.7 75 33.3
BcaC02g07989 Brassica carinata HOM05D000171 ORTHO05D000101 3.7e-06 54.7 64 40.6
BcaC02g07990 Brassica carinata HOM05D000171 ORTHO05D000101 3.7e-06 54.7 66 40.9
A04p24260 Brassica napus HOM05D000171 ORTHO05D000101 3.7e-06 54.7 66 40.9
C03p11510 Brassica napus HOM05D000171 ORTHO05D000101 3.7e-06 54.7 65 40.0
C04p60550 Brassica napus HOM05D000171 ORTHO05D000101 3.7e-06 54.7 57 42.1
C04p60620 Brassica napus HOM05D000171 ORTHO05D000101 3.7e-06 54.7 57 42.1
C04p61010 Brassica napus HOM05D000171 ORTHO05D000101 3.7e-06 54.7 64 40.6
C04p61040 Brassica napus HOM05D000171 ORTHO05D000101 3.7e-06 54.7 64 40.6
BolC4t27589H Brassica oleracea HOM05D000171 ORTHO05D000101 3.7e-06 54.7 64 40.6
BraA04t17914Z Brassica rapa HOM05D000171 ORTHO05D000101 3.7e-06 54.7 63 39.7
BraA04t17945Z Brassica rapa HOM05D000171 ORTHO05D000101 3.7e-06 54.7 66 40.9
Carub.0003s3053 Capsella rubella HOM05D000171 ORTHO05D000101 3.7e-06 54.7 65 36.9
Carub.0005s0433 Capsella rubella HOM05D000171 ORTHO05D000101 3.7e-06 54.7 65 40.0
AL5G12460 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.9e-06 54.3 65 41.5
AL9U10990 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.9e-06 54.3 65 38.5
BcaC03g14814 Brassica carinata HOM05D000171 ORTHO05D000101 4.9e-06 54.3 72 36.1
A04p34160 Brassica napus HOM05D000171 ORTHO05D000101 4.9e-06 54.3 65 41.5
Carub.0001s3226 Capsella rubella HOM05D000171 ORTHO05D000101 4.9e-06 54.3 64 35.9
Carub.0001s4256 Capsella rubella HOM05D000171 ORTHO05D000101 4.9e-06 54.3 65 44.6
BraA05t21397Z Brassica rapa HOM05D000171 ORTHO05D000101 6.4e-06 53.9 64 39.1
Thhalv10002976m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 6.4e-06 53.9 66 36.4
Thhalv10012279m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 6.4e-06 53.9 71 33.8
Thhalv10012324m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 6.4e-06 53.9 62 38.7
AL3G52270 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 8.3e-06 53.5 66 39.4
AL5G26260 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 8.3e-06 53.5 65 43.1
BcaB06g28544 Brassica carinata HOM05D000171 ORTHO05D000101 8.3e-06 53.5 68 39.7
BolC4t23399H Brassica oleracea HOM05D000171 ORTHO05D000101 8.3e-06 53.5 64 39.1
BolC9t59875H Brassica oleracea HOM05D000171 ORTHO05D000101 8.3e-06 53.5 58 39.7
CARHR112760 Cardamine hirsuta HOM05D000171 ORTHO05D000101 8.3e-06 53.5 59 40.7


User provided reference genes

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