Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR257930 Cardamine hirsuta HOM05D007751 ORTHO05D009813 4.8e-86 321.2 174 100.0
CARHR258610 Cardamine hirsuta HOM05D007751 ORTHO05D009813 7.4e-63 244.2 173 75.7
AL8G24040 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 8.8e-56 220.7 177 68.9
AT5G50040 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.1e-55 220.3 167 72.5
Carub.0008s0995 Capsella rubella HOM05D007751 ORTHO05D009813 2.0e-55 219.5 175 70.3
Carub.0008s1000 Capsella rubella HOM05D007751 ORTHO05D009813 1.7e-54 216.5 174 69.0
Thhalv10015309m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 3.8e-51 205.3 175 68.0
Carub.0008s0996 Capsella rubella HOM05D007751 ORTHO05D009813 9.4e-50 200.7 175 63.4
Sp6g11910 Schrenkiella parvula HOM05D007751 ORTHO05D009813 1.2e-49 200.3 173 67.6
BolC4t26306H Brassica oleracea HOM05D007751 ORTHO05D009813 1.5e-47 193.4 170 63.5
A04p13370 Brassica napus HOM05D007751 ORTHO05D009813 2.0e-47 193.0 170 63.5
C04p47120 Brassica napus HOM05D007751 ORTHO05D009813 2.0e-47 193.0 170 63.5
BraA04t16992Z Brassica rapa HOM05D007751 ORTHO05D009813 2.6e-47 192.6 170 62.9
Carub.0008s0997 Capsella rubella HOM05D007751 ORTHO05D009813 5.7e-47 191.4 171 61.4
Carub.0008s0998 Capsella rubella HOM05D007751 ORTHO05D009813 7.4e-47 191.0 175 62.3
AL8G24070 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.2e-44 183.7 171 61.4
AT5G50050 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 5.5e-42 174.9 170 59.4
Carub.0008s1007 Capsella rubella HOM05D007751 ORTHO05D009813 2.1e-41 172.9 176 56.8
Carub.0008s0999 Capsella rubella HOM05D007751 ORTHO05D009813 2.3e-40 169.5 171 58.5
Sp6g11920 Schrenkiella parvula HOM05D007751 ORTHO05D009813 8.8e-40 167.5 169 56.2
C03p33340 Brassica napus HOM05D007751 ORTHO05D009813 2.6e-39 166.0 167 56.3
Thhalv10014776m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 4.4e-39 165.2 173 55.5
AT5G50030 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 7.5e-39 164.5 175 58.3
BcaC01g04833 Brassica carinata HOM05D007751 ORTHO05D009813 1.7e-38 163.3 167 55.7
CARHR258630 Cardamine hirsuta HOM05D007751 ORTHO05D009813 2.2e-38 162.9 173 55.5
A10p08560 Brassica napus HOM05D007751 ORTHO05D009813 8.2e-38 161.0 173 53.8
BraSC37t46147Z Brassica rapa HOM05D007751 ORTHO05D009813 8.2e-38 161.0 173 53.8
AL8G24030 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 2.4e-37 159.5 176 56.8
Carub.0008s0994 Capsella rubella HOM05D007751 ORTHO05D009813 7.0e-37 157.9 174 55.7
BraA03t10746Z Brassica rapa HOM05D007751 ORTHO05D009813 2.7e-36 156.0 170 52.9
Sp6g11860 Schrenkiella parvula HOM05D007751 ORTHO05D009813 2.7e-36 156.0 173 53.2
BcaB01g04307 Brassica carinata HOM05D007751 ORTHO05D009813 1.0e-35 154.1 170 52.4
BcaC01g06316 Brassica carinata HOM05D007751 ORTHO05D009813 1.0e-35 154.1 170 52.4
BolC3t14109H Brassica oleracea HOM05D007751 ORTHO05D009813 1.0e-35 154.1 170 52.4
Sp6g11880 Schrenkiella parvula HOM05D007751 ORTHO05D009813 1.0e-35 154.1 170 54.7
A03p14510 Brassica napus HOM05D007751 ORTHO05D009813 2.2e-35 152.9 170 52.4
Carub.0008s1002 Capsella rubella HOM05D007751 ORTHO05D009813 2.2e-35 152.9 181 53.0
C03p16960 Brassica napus HOM05D007751 ORTHO05D009813 2.9e-35 152.5 172 53.5
AT5G50070 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 5.0e-35 151.8 181 51.9
Aa31sc47G40 Aethionema arabicum HOM05D007751 ORTHO05D009813 1.9e-34 149.8 173 52.6
AL8G24060 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 7.2e-34 147.9 181 50.3
Aa31sc47G80 Aethionema arabicum HOM05D007751 ORTHO05D009813 1.6e-33 146.7 151 53.0
Carub.0008s1001 Capsella rubella HOM05D007751 ORTHO05D009813 2.7e-33 146.0 176 49.4
BolC9t56709H Brassica oleracea HOM05D007751 ORTHO05D009813 8.8e-32 141.0 153 56.2
CARHR284460 Cardamine hirsuta HOM05D007751 ORTHO05D009813 3.7e-30 135.6 179 45.8
AL8G24050 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 6.3e-30 134.8 167 49.1
Carub.0002s0822 Capsella rubella HOM05D007751 ORTHO05D009813 8.3e-30 134.4 172 49.4
AT4G24640 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.1e-29 134.0 162 49.4
AT1G54980 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.4e-29 133.7 172 50.6
AL7G28560 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.8e-29 133.3 162 48.8
Thhalv10026329m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 7.0e-29 131.3 162 48.1
AT5G50060 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 9.1e-29 131.0 167 46.1
Carub.0007s1642 Capsella rubella HOM05D007751 ORTHO05D009813 5.9e-28 128.3 162 47.5
AL1G65530 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.3e-27 127.1 141 52.5
THA.LOC104799810 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 1.1e-26 124.0 178 42.1
CARHR232030 Cardamine hirsuta HOM05D007751 ORTHO05D009813 6.1e-25 118.2 166 42.2
Sp7g22630 Schrenkiella parvula HOM05D007751 ORTHO05D009813 8.0e-25 117.9 162 43.8
BcaNung04957 Brassica carinata HOM05D007751 ORTHO05D009813 2.3e-24 116.3 162 43.8
C09p38520 Brassica napus HOM05D007751 ORTHO05D009813 9.8e-23 110.9 127 53.5
Carub.0008s1006 Capsella rubella HOM05D007751 ORTHO05D009813 4.9e-22 108.6 182 42.9
Carub.0002s0821 Capsella rubella HOM05D007751 ORTHO05D009813 6.3e-22 108.2 175 42.3
C01p19970 Brassica napus HOM05D007751 ORTHO05D009813 1.8e-21 106.7 162 42.0
BolC1t01925H Brassica oleracea HOM05D007751 ORTHO05D009813 1.8e-21 106.7 162 42.0
BraA01t01533Z Brassica rapa HOM05D007751 ORTHO05D009813 1.8e-21 106.7 162 42.0
BcaC09g50845 Brassica carinata HOM05D007751 ORTHO05D009813 2.4e-21 106.3 162 41.4
Carub.0008s1005 Capsella rubella HOM05D007751 ORTHO05D009813 5.4e-21 105.1 182 40.1
Aa31sc47G50 Aethionema arabicum HOM05D007751 ORTHO05D009813 7.0e-21 104.8 178 37.6
A01p15990 Brassica napus HOM05D007751 ORTHO05D009813 1.6e-20 103.6 162 41.4
THA.LOC104800050 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 1.0e-19 100.9 175 36.6
Aa31LG4G9710 Aethionema arabicum HOM05D007751 ORTHO05D009813 8.6e-19 97.8 114 49.1
BraA02t06621Z Brassica rapa HOM05D007751 ORTHO05D009813 2.5e-18 96.3 174 38.5
C02p25780 Brassica napus HOM05D007751 ORTHO05D009813 2.8e-17 92.8 174 37.9
BolC2t08647H Brassica oleracea HOM05D007751 ORTHO05D009813 1.5e-15 87.0 145 38.6
CARHR258620 Cardamine hirsuta HOM05D007751 ORTHO05D009813 2.6e-15 86.3 178 36.5
Carub.0002s0820 Capsella rubella HOM05D007751 ORTHO05D009813 5.8e-15 85.1 176 34.7
BraA02t06629Z Brassica rapa HOM05D007751 ORTHO05D009813 6.4e-14 81.6 183 33.9
A02p15670 Brassica napus HOM05D007751 ORTHO05D009813 8.3e-14 81.3 183 33.9
A08p21410 Brassica napus HOM05D007751 ORTHO05D009813 8.3e-14 81.3 110 42.7
BcaC07g38163 Brassica carinata HOM05D007751 ORTHO05D009813 1.1e-13 80.9 105 43.8
A01p20050 Brassica napus HOM05D007751 ORTHO05D009813 1.8e-13 80.1 183 32.8
BraA01t01929Z Brassica rapa HOM05D007751 ORTHO05D009813 2.4e-13 79.7 183 32.8
BolC2t08679H Brassica oleracea HOM05D007751 ORTHO05D009813 4.1e-13 79.0 183 32.8
C02p26100 Brassica napus HOM05D007751 ORTHO05D009813 7.0e-13 78.2 180 32.8
Carub.0008s1003 Capsella rubella HOM05D007751 ORTHO05D009813 2.0e-12 76.6 184 35.3
BcaB01g02924 Brassica carinata HOM05D007751 ORTHO05D009813 4.6e-12 75.5 58 69.0
BcaC03g15060 Brassica carinata HOM05D007751 ORTHO05D009813 6.0e-12 75.1 136 34.6
BolC4t26309H Brassica oleracea HOM05D007751 ORTHO05D009813 5.0e-11 72.0 68 63.2
BolC8t48582H Brassica oleracea HOM05D007751 ORTHO05D009813 3.3e-10 69.3 108 39.8
Carub.0008s1004 Capsella rubella HOM05D007751 ORTHO05D009813 2.1e-09 66.6 140 36.4
Psat6g191360 Pisum sativum HOM05D004894 ORTHO05D005689 8.3e-06 54.7 110 39.1


User provided reference genes

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