Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 1.4e-95 353.2 217 100.0
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 6.4e-88 327.8 220 83.6
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 7.8e-86 320.9 220 82.7
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 1.1e-84 317.0 220 80.0
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 1.8e-82 309.7 220 79.1
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 3.1e-82 308.9 220 79.5
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 3.7e-80 302.0 221 76.9
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 3.7e-80 302.0 221 76.9
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 8.3e-80 300.8 221 76.5
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 1.6e-78 296.6 221 75.1
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 3.5e-78 295.4 221 75.1
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 9.2e-71 270.8 230 71.3
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 3.1e-66 255.8 227 67.0
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 1.8e-58 229.9 172 73.3
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 2.0e-57 226.5 170 72.9
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 4.4e-57 225.3 170 71.8
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 5.8e-57 224.9 170 72.4
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 2.2e-56 223.0 175 68.0
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 2.9e-56 222.6 170 71.2
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 4.9e-56 221.9 170 70.0
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 6.4e-56 221.5 171 70.2
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 1.1e-55 220.7 170 70.6
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 1.4e-55 220.3 171 71.3
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 1.4e-55 220.3 171 70.8
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 1.4e-55 220.3 171 70.2
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 4.2e-55 218.8 171 69.0
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 4.2e-55 218.8 175 68.6
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 7.1e-55 218.0 170 69.4
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 7.1e-55 218.0 170 70.0
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 7.1e-55 218.0 170 70.0
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 7.1e-55 218.0 170 70.0
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 7.1e-55 218.0 171 68.4
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 7.1e-55 218.0 176 67.0
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 9.3e-55 217.6 176 67.6
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 9.3e-55 217.6 171 69.0
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 2.1e-54 216.5 170 67.6
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 2.7e-54 216.1 171 70.2
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 3.5e-54 215.7 170 69.4
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 3.5e-54 215.7 164 72.6
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 4.6e-54 215.3 173 67.6
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 4.6e-54 215.3 170 67.1
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 6.0e-54 214.9 172 69.2
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 7.8e-54 214.5 172 68.0
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 1.0e-53 214.2 172 66.9
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 1.0e-53 214.2 170 67.6
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.3e-53 213.8 170 67.6
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 1.7e-53 213.4 171 69.0
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 1.7e-53 213.4 171 67.3
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 2.3e-53 213.0 175 68.0
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 2.3e-53 213.0 171 66.7
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 2.3e-53 213.0 170 67.1
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 3.0e-53 212.6 173 66.5
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 3.0e-53 212.6 171 67.8
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 3.9e-53 212.2 172 68.0
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 3.9e-53 212.2 172 68.0
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 3.9e-53 212.2 171 68.4
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 3.9e-53 212.2 171 68.4
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 5.1e-53 211.8 175 64.6
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 6.6e-53 211.5 175 66.9
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 6.6e-53 211.5 187 63.1
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 8.7e-53 211.1 175 65.1
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 8.7e-53 211.1 199 61.8
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 1.1e-52 210.7 176 65.3
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 1.1e-52 210.7 172 68.0
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 1.9e-52 209.9 170 69.4
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 1.9e-52 209.9 171 66.7
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 2.5e-52 209.5 179 64.8
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 4.3e-52 208.8 170 65.3
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 4.3e-52 208.8 176 63.6
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 4.3e-52 208.8 176 63.6
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 5.6e-52 208.4 176 67.0
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 7.3e-52 208.0 158 71.5
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 2.8e-51 206.1 171 66.1
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 3.6e-51 205.7 170 65.9
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 4.8e-51 205.3 171 66.1
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 4.5e-49 198.7 171 66.1
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 7.6e-49 198.0 171 64.3
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 9.9e-49 197.6 170 64.7
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 1.7e-48 196.8 172 62.8
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 2.9e-48 196.1 171 64.3
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 4.9e-48 195.3 163 66.3
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 8.4e-48 194.5 163 64.4
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 1.1e-47 194.1 175 62.9
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 1.4e-47 193.7 174 63.2
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 3.2e-47 192.6 170 60.0
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 5.4e-47 191.8 170 62.4
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 1.2e-46 190.7 147 68.7
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 1.2e-46 190.7 174 62.1
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 1.2e-46 190.7 153 68.0
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 1.6e-46 190.3 176 60.2
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 2.7e-46 189.5 140 79.3
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 4.6e-46 188.7 172 64.5
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 6.0e-46 188.3 172 64.5
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 1.3e-45 187.2 172 64.0
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.3e-45 187.2 172 64.0
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.3e-45 187.2 172 64.0
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 1.8e-45 186.8 134 72.4
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 1.8e-45 186.8 148 64.9
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 1.8e-45 186.8 170 61.8
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 2.3e-45 186.4 217 53.5
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 3.0e-45 186.0 175 59.4
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 6.7e-45 184.9 176 60.2
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 6.7e-45 184.9 189 58.2
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 5.6e-44 181.8 164 61.6
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 3.6e-43 179.1 169 59.8
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 6.2e-43 178.3 126 77.0
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 9.0e-42 174.5 169 55.6
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 3.4e-41 172.6 126 73.8
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 7.1e-39 164.9 136 66.9
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 3.9e-37 159.1 147 61.2
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 1.2e-30 137.5 134 56.7
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 1.6e-30 137.1 112 66.1
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 6.0e-30 135.2 145 51.0
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 7.9e-30 134.8 173 48.0
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 2.3e-29 133.3 109 64.2
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 2.5e-28 129.8 144 49.3
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 3.3e-28 129.4 133 57.9
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 7.4e-28 128.3 75 89.3
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 1.1e-26 124.4 145 49.0
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 1.1e-26 124.4 114 61.4
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 3.4e-25 119.4 104 56.7
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 1.3e-21 107.5 113 69.9
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 1.0e-16 91.3 106 47.2
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 3.8e-16 89.4 111 45.0
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.4e-07 60.8 63 60.3


User provided reference genes

Program Settings