Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR244140 Cardamine hirsuta HOM05D008941 ORTHO05D010842 8.0e-28 126.3 62 100.0
AL7G15310 Arabidopsis lyrata HOM05D008941 ORTHO05D010842 5.7e-26 120.2 62 95.2
Sp7g33560 Schrenkiella parvula HOM05D008941 ORTHO05D010842 3.2e-24 114.4 63 92.1
AT4G35783 Arabidopsis thaliana HOM05D008941 ORTHO05D010842 7.0e-24 113.2 63 92.1
C01p03270 Brassica napus HOM05D008941 ORTHO05D010842 5.9e-23 110.2 64 85.9
C07p61340 Brassica napus HOM05D008941 ORTHO05D010842 3.0e-22 107.8 62 83.9
BolC7t46560H Brassica oleracea HOM05D008941 ORTHO05D010842 3.0e-22 107.8 62 83.9
A01p02930 Brassica napus HOM05D008941 ORTHO05D010842 3.9e-22 107.5 63 85.7
BraA01t00276Z Brassica rapa HOM05D008941 ORTHO05D010842 3.9e-22 107.5 63 85.7
BcaNung04354 Brassica carinata HOM05D008941 ORTHO05D010842 1.5e-21 105.5 62 82.3
BraA03t15456Z Brassica rapa HOM05D008941 ORTHO05D010842 1.9e-21 105.1 62 82.3
BolC1t00313H Brassica oleracea HOM05D008941 ORTHO05D010842 3.3e-21 104.4 64 84.4
BcaNung04352 Brassica carinata HOM05D008941 ORTHO05D010842 5.6e-21 103.6 63 82.5
BcaNung05046 Brassica carinata HOM05D008941 ORTHO05D010842 5.6e-21 103.6 63 82.5
Carub.0007s0446 Capsella rubella HOM05D008941 ORTHO05D010842 4.4e-18 94.0 63 76.2
Thecc.01G010500 Theobroma cacao HOM05D008941 ORTHO05D010842 1.5e-10 68.9 65 56.9
THA.LOC109116896 Tarenaya hassleriana HOM05D008941 ORTHO05D010842 3.4e-10 67.8 59 64.4
COL.COLO4_22503 Corchorus olitorius HOM05D008941 ORTHO05D010842 9.8e-10 66.2 68 55.9
Sed0000767 Sechium edule HOM05D008941 ORTHO05D010842 2.4e-08 61.6 60 50.0
Nn1g07145 Nelumbo nucifera HOM05D008941 ORTHO05D010842 2.1e-07 58.5 62 48.4
Gohir.A05G170700 Gossypium hirsutum HOM05D008941 ORTHO05D010842 3.5e-07 57.8 64 51.6
CSS0009089 Camellia sinensis var. sinensis HOM05D008941 ORTHO05D010842 4.6e-07 57.4 57 54.4
CSS0012780 Camellia sinensis var. sinensis HOM05D008941 ORTHO05D010842 4.6e-07 57.4 57 54.4
Aqoxy6G01918 Aquilegia oxysepala HOM05D008941 ORTHO05D010842 7.8e-07 56.6 68 50.0
Mapoly0151s0015 Marchantia polymorpha HOM05D008941 ORTHO05D010842 7.8e-07 56.6 71 47.9
Medtr5g023120 Medicago truncatula HOM05D008941 ORTHO05D010842 7.8e-07 56.6 61 49.2
FAN23G1674 Fragaria x ananassa HOM05D008941 ORTHO05D010842 1.0e-06 56.2 30 70.0
Nn6g31885 Nelumbo nucifera HOM05D008941 ORTHO05D010842 1.3e-06 55.8 58 50.0
MD02G1122600 Malus domestica HOM05D008941 ORTHO05D010842 2.3e-06 55.1 32 65.6
Thecc.06G221500 Theobroma cacao HOM05D008941 ORTHO05D010842 2.3e-06 55.1 60 48.3
Lj2g0015207 Lotus japonicus HOM05D008941 ORTHO05D010842 3.0e-06 54.7 58 50.0
Prupe.7G175900 Prunus persica HOM05D008941 ORTHO05D010842 5.1e-06 53.9 66 45.5
Gohir.D05G173750 Gossypium hirsutum HOM05D008941 ORTHO05D010842 6.6e-06 53.5 30 73.3
Gorai.009G179000 Gossypium raimondii HOM05D008941 ORTHO05D010842 6.6e-06 53.5 30 73.3
MD04G1094700 Malus domestica HOM05D001415 ORTHO05D001075 8.6e-06 53.1 46 50.0


User provided reference genes

Program Settings