Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR238720 Cardamine hirsuta HOM05D007659 ORTHO05D009227 2.6e-77 292.0 147 100.0
AT4G30845 Arabidopsis thaliana HOM05D007659 ORTHO05D009227 2.6e-40 169.1 115 79.1
Carub.0007s0971 Capsella rubella HOM05D007659 ORTHO05D009227 1.1e-38 163.7 114 76.3
AL7G21270 Arabidopsis lyrata HOM05D007659 ORTHO05D009227 2.4e-38 162.5 117 77.8
BcaNung01556 Brassica carinata HOM05D007659 ORTHO05D009227 2.1e-34 149.4 122 70.5
A03p60380 Brassica napus HOM05D007659 ORTHO05D009227 8.0e-34 147.5 122 67.2
C07p58250 Brassica napus HOM05D007659 ORTHO05D009227 8.0e-34 147.5 122 68.0
BolC7t46283H Brassica oleracea HOM05D007659 ORTHO05D009227 8.0e-34 147.5 122 68.0
BraA03t15078Z Brassica rapa HOM05D007659 ORTHO05D009227 8.0e-34 147.5 122 67.2
BcaNung02735 Brassica carinata HOM05D007659 ORTHO05D009227 4.0e-33 145.2 122 66.4
Thhalv10026581m.g Eutrema salsugineum HOM05D007659 ORTHO05D009227 6.7e-33 144.4 122 67.2
Aa31LG2G19540 Aethionema arabicum HOM05D007659 ORTHO05D009227 2.2e-31 139.4 119 64.7
THA.LOC104803555 Tarenaya hassleriana HOM05D007659 ORTHO05D009227 1.8e-30 136.3 126 58.7
Cc00_g30920 Coffea canephora HOM05D007659 ORTHO05D009227 5.7e-24 114.8 116 53.4
Cc02_g28880 Coffea canephora HOM05D007659 ORTHO05D009227 5.7e-24 114.8 117 53.0
FvH4_4g09760 Fragaria vesca HOM05D007659 ORTHO05D009227 9.8e-24 114.0 93 64.5
Gohir.A04G040700 Gossypium hirsutum HOM05D007659 ORTHO05D009227 1.3e-23 113.6 100 58.0
FAN22G0789 Fragaria x ananassa HOM05D007659 ORTHO05D009227 1.7e-23 113.2 93 64.5
Gohir.D05G342500 Gossypium hirsutum HOM05D007659 ORTHO05D009227 1.7e-23 113.2 100 58.0
FAN07G1615 Fragaria x ananassa HOM05D007659 ORTHO05D009227 2.8e-23 112.5 93 64.5
QL02p094226 Quercus lobata HOM05D007659 ORTHO05D009227 2.8e-23 112.5 115 53.0
Gorai.009G368800 Gossypium raimondii HOM05D007659 ORTHO05D009227 6.3e-23 111.3 98 58.2
MD12G1196500 Malus domestica HOM05D007659 ORTHO05D009227 1.8e-22 109.8 93 62.4
Thecc.09G154300 Theobroma cacao HOM05D007659 ORTHO05D009227 1.8e-22 109.8 87 64.4
Cfa019408 Carpinus fangiana HOM05D007659 ORTHO05D009227 1.2e-21 107.1 112 54.5
Ciclev10009916m.g Citrus clementina HOM05D007659 ORTHO05D009227 2.7e-21 105.9 96 58.3
Duzib187G1272 Durio zibethinus HOM05D007659 ORTHO05D009227 3.5e-21 105.5 89 59.6
Hma1.2p1_1084F.1_g255330 Hydrangea macrophylla HOM05D007659 ORTHO05D009227 4.5e-21 105.1 86 62.8
Prupe.1G101900 Prunus persica HOM05D007659 ORTHO05D009227 4.5e-21 105.1 92 57.6
Rhsim01G0023600 Rhododendron simsii HOM05D007659 ORTHO05D009227 4.5e-21 105.1 85 62.4
Dinv41341 Davidia involucrata HOM05D007659 ORTHO05D009227 5.9e-21 104.8 86 60.5
Actinidia28561 Actinidia chinensis HOM05D007659 ORTHO05D009227 7.7e-21 104.4 108 49.1
Haze_19124 Corylus avellana HOM05D007659 ORTHO05D009227 7.7e-21 104.4 124 49.2
RcHm_v2.0_Chr4g0405451 Rosa chinensis HOM05D007659 ORTHO05D009227 7.7e-21 104.4 93 59.1
Haze_19129 Corylus avellana HOM05D007659 ORTHO05D009227 1.3e-20 103.6 124 50.0
Haze_19136 Corylus avellana HOM05D007659 ORTHO05D009227 1.3e-20 103.6 124 50.0
Aqoxy7G03300 Aquilegia oxysepala HOM05D007659 ORTHO05D009227 2.3e-20 102.8 123 50.4
TWI63G1302 Tripterygium wilfordii HOM05D007659 ORTHO05D009227 2.3e-20 102.8 101 54.5
EL10Ac4g09658 Beta vulgaris HOM05D007659 ORTHO05D009227 2.9e-20 102.4 113 47.8
Eucgr.L01549 Eucalyptus grandis HOM05D007659 ORTHO05D009227 2.9e-20 102.4 87 60.9
Haze_19128 Corylus avellana HOM05D007659 ORTHO05D009227 5.0e-20 101.7 112 53.6
Peaxi162Scf00038g00725 Petunia axillaris HOM05D007659 ORTHO05D009227 5.0e-20 101.7 87 58.6
Lj4g0008058 Lotus japonicus HOM05D007659 ORTHO05D009227 6.6e-20 101.3 86 60.5
VMungo1215G2964 Vigna mungo HOM05D007659 ORTHO05D009227 1.5e-19 100.1 89 60.7
Eucgr.C02516 Eucalyptus grandis HOM05D007659 ORTHO05D009227 1.9e-19 99.8 87 58.6
Lalb_Chr12g0198851 Lupinus albus HOM05D007659 ORTHO05D009227 2.5e-19 99.4 101 53.5
Manes.06G031900 Manihot esculenta HOM05D007659 ORTHO05D009227 3.3e-19 99.0 83 56.6
Haze_27708 Corylus avellana HOM05D007659 ORTHO05D009227 4.2e-19 98.6 84 59.5
CANSAT11G2634 Cannabis sativa HOM05D007659 ORTHO05D009227 7.2e-19 97.8 85 56.5
MELO3C010198.2 Cucumis melo HOM05D007659 ORTHO05D009227 7.2e-19 97.8 93 53.8
Sabra06G0137200 Salix brachista HOM05D007659 ORTHO05D009227 7.2e-19 97.8 107 44.9
Hund07205 Selenicereus undatus HOM05D007659 ORTHO05D009227 7.2e-19 97.8 80 65.0
Phvul.003G153300 Phaseolus vulgaris HOM05D007659 ORTHO05D009227 9.5e-19 97.4 79 60.8
GSVIVG01023691001 Vitis vinifera HOM05D007659 ORTHO05D009227 1.2e-18 97.1 86 59.3
arahy.Tifrunner.gnm1.ann1.FWLQ6H Arachis hypogaea HOM05D007659 ORTHO05D009227 1.6e-18 96.7 84 60.7
arahy.Tifrunner.gnm1.ann1.KUG4GU Arachis hypogaea HOM05D007659 ORTHO05D009227 1.6e-18 96.7 84 60.7
vmacro13049 Vaccinium macrocarpon HOM05D007659 ORTHO05D009227 2.1e-18 96.3 100 53.0
Glyma.17G071000 Glycine max HOM05D007659 ORTHO05D009227 2.8e-18 95.9 78 61.5
Ah.06g188510 Amaranthus hybridus HOM05D000987 ORTHO05D000831 3.6e-18 95.5 88 58.0
Haze_19137 Corylus avellana HOM05D007659 ORTHO05D009227 3.6e-18 95.5 109 51.4
PGSC0003DMG400011214 Solanum tuberosum HOM05D007659 ORTHO05D009227 4.7e-18 95.1 83 55.4
Ca_21156_v3 Cicer arietinum L. HOM05D007659 ORTHO05D009227 6.1e-18 94.7 79 57.0
unitig_736.g22510 Utricularia gibba HOM05D007659 ORTHO05D009227 6.1e-18 94.7 104 51.0
Nn8g40114 Nelumbo nucifera HOM05D007659 ORTHO05D009227 8.0e-18 94.4 84 54.8
CDE04G0159 Ceratophyllum demersum HOM05D007659 ORTHO05D009227 1.0e-17 94.0 81 54.3
Medtr4g130250 Medicago truncatula HOM05D007659 ORTHO05D009227 1.0e-17 94.0 88 54.5
ClCG06G012660 Citrullus lanatus HOM05D007659 ORTHO05D009227 1.8e-17 93.2 67 62.7
CsaV3_1G029210 Cucumis sativus L. HOM05D007659 ORTHO05D009227 1.8e-17 93.2 106 48.1
Solyc07g006040.3 Solanum lycopersicum HOM05D007659 ORTHO05D009227 1.8e-17 93.2 84 53.6
Migut.J01394 Erythranthe guttata HOM05D007659 ORTHO05D009227 2.3e-17 92.8 93 54.8
MSTRG.6163 Avicennia marina HOM05D007659 ORTHO05D009227 3.0e-17 92.4 90 52.2
Nitab4.5_0016001g0010 Nicotiana tabacum HOM05D007659 ORTHO05D009227 4.0e-17 92.0 60 70.0
Sed0026034 Sechium edule HOM05D007659 ORTHO05D009227 5.2e-17 91.7 91 53.8
Haze_19130 Corylus avellana HOM05D007659 ORTHO05D009227 6.8e-17 91.3 81 59.3
Haze_19127 Corylus avellana HOM05D007659 ORTHO05D009227 8.9e-17 90.9 81 58.0
CiPaw.15G164100 Carya illinoinensis HOM05D007659 ORTHO05D009227 2.0e-16 89.7 77 61.0
PGR102G1560 Punica granatum HOM05D007659 ORTHO05D009227 2.6e-16 89.4 85 54.1
PSO782G2453 Papaver somniferum HOM05D007659 ORTHO05D009227 3.4e-16 89.0 63 66.7
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 4.4e-16 88.6 72 62.5
HanXRQChr03g0066011 Helianthus annuus HOM05D007659 ORTHO05D009227 4.4e-16 88.6 87 52.9
MD04G1182900 Malus domestica HOM05D007659 ORTHO05D009227 7.5e-16 87.8 61 68.9
PSO063G0802 Papaver somniferum HOM05D007659 ORTHO05D009227 7.5e-16 87.8 63 66.7
Lsat_1_v5_gn_7_50920 Lactuca sativa HOM05D007659 ORTHO05D009227 9.8e-16 87.4 78 60.3
HPP92_006698 Vanilla planifolia HOM05D007659 ORTHO05D009227 9.8e-16 87.4 68 60.3
TPR.G24875 Trifolium pratense HOM05D007659 ORTHO05D009227 1.3e-15 87.0 69 58.0
Sc06g0005340 Simmondsia chinensis HOM05D007659 ORTHO05D009227 2.2e-15 86.3 90 52.2
Psat4g010200 Pisum sativum HOM05D007659 ORTHO05D009227 3.7e-15 85.5 74 55.4
ATR0111G019 Amborella trichopoda HOM05D007659 ORTHO05D009227 4.9e-15 85.1 90 50.0
SalBow6G0978 Salvia bowleyana HOM05D007659 ORTHO05D009227 1.1e-14 84.0 92 53.3
Potri.006G180200 Populus trichocarpa HOM05D007659 ORTHO05D009227 2.7e-13 79.3 47 76.6
Os03g0210900 Oryza sativa ssp. japonica HOM05D007659 ORTHO05D009227 5.9e-13 78.2 65 60.0
Zm00001eb400430 Zea mays HOM05D007659 ORTHO05D009227 7.8e-13 77.8 86 45.3
CBR_g10976 Chara braunii HOM05D007659 ORTHO05D009227 4.0e-09 65.5 48 60.4
Pp3c17_8590 Physcomitrium patens HOM05D007659 ORTHO05D009227 2.6e-08 62.8 43 62.8
Mapoly0004s0134 Marchantia polymorpha HOM05D007659 ORTHO05D009227 2.2e-07 59.7 53 56.6
AagrBONN_evm.TU.Sc2ySwM_228.2308 Anthoceros agrestis HOM05D007659 ORTHO05D009227 1.9e-06 56.6 40 62.5


User provided reference genes

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