Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR238220 Cardamine hirsuta HOM05D000306 ORTHO05D007657 1.4e-237 825.9 405 100.0
AT4G30310 Arabidopsis thaliana HOM05D000306 ORTHO05D007657 2.3e-224 781.9 399 95.2
AL7G21840 Arabidopsis lyrata HOM05D000306 ORTHO05D007657 1.9e-223 778.9 399 94.7
Thhalv10024769m.g Eutrema salsugineum HOM05D000306 ORTHO05D007657 6.9e-221 770.4 399 93.0
Sp7g28180 Schrenkiella parvula HOM05D000306 ORTHO05D007657 1.5e-220 769.2 399 94.0
Carub.0007s1029 Capsella rubella HOM05D000306 ORTHO05D007657 1.0e-219 766.5 399 94.0
BraA03t15029Z Brassica rapa HOM05D000306 ORTHO05D007657 1.6e-217 759.2 411 91.5
A03p59750 Brassica napus HOM05D000306 ORTHO05D007657 6.1e-217 757.3 411 91.2
BolC7t46241H Brassica oleracea HOM05D000306 ORTHO05D007657 1.3e-216 756.1 411 91.2
C07p57810 Brassica napus HOM05D000306 ORTHO05D007657 5.1e-216 754.2 411 91.0
BcaNung00538 Brassica carinata HOM05D000306 ORTHO05D007657 2.5e-210 735.3 400 91.2
THA.LOC104803506 Tarenaya hassleriana HOM05D000306 ORTHO05D007657 2.0e-207 725.7 398 86.7
Cpa.g.sc95.65 Carica papaya HOM05D000306 ORTHO05D007657 3.3e-199 698.4 399 83.7
GSVIVG01029150001 Vitis vinifera HOM05D000306 ORTHO05D007657 2.8e-198 695.3 399 82.2
Prupe.1G089400 Prunus persica HOM05D000306 ORTHO05D007657 4.8e-198 694.5 399 82.2
Manes.06G026700 Manihot esculenta HOM05D000306 ORTHO05D007657 6.3e-198 694.1 397 82.1
CiPaw.07G190000 Carya illinoinensis HOM05D000306 ORTHO05D007657 4.1e-197 691.4 399 82.5
PGR142G2969 Punica granatum HOM05D000306 ORTHO05D007657 7.0e-197 690.6 399 82.5
QL02p097271 Quercus lobata HOM05D000306 ORTHO05D007657 9.1e-197 690.3 402 81.3
FvH4_4g09080 Fragaria vesca HOM05D000306 ORTHO05D007657 1.2e-196 689.9 399 81.2
Thecc.09G168500 Theobroma cacao HOM05D000306 ORTHO05D007657 1.1e-194 683.3 399 81.7
Hma1.2p1_3301F.1_g335020 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 1.9e-194 682.6 398 81.7
Potri.018G095700 Populus trichocarpa HOM05D000306 ORTHO05D007657 1.9e-194 682.6 397 80.4
FAN22G1929 Fragaria x ananassa HOM05D000306 ORTHO05D007657 2.5e-194 682.2 403 80.6
Dinv42746 Davidia involucrata HOM05D000306 ORTHO05D007657 3.2e-194 681.8 399 82.0
Dinv43355 Davidia involucrata HOM05D000306 ORTHO05D007657 3.2e-194 681.8 399 82.0
Actinidia17107 Actinidia chinensis HOM05D000306 ORTHO05D007657 1.6e-193 679.5 399 80.5
CSS0004024 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D007657 1.6e-193 679.5 399 81.7
Sed0007717 Sechium edule HOM05D000306 ORTHO05D007657 1.6e-193 679.5 399 81.2
Aqoxy7G03118 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 2.7e-193 678.7 399 80.5
PSO782G2546 Papaver somniferum HOM05D000306 ORTHO05D007657 2.7e-193 678.7 399 79.4
Haze_22120 Corylus avellana HOM05D000306 ORTHO05D007657 3.6e-193 678.3 413 80.1
Eucgr.C00188 Eucalyptus grandis HOM05D000306 ORTHO05D007657 6.1e-193 677.6 399 81.5
PSO063G6265 Papaver somniferum HOM05D000306 ORTHO05D007657 6.1e-193 677.6 399 79.4
FAN17G2452 Fragaria x ananassa HOM05D000306 ORTHO05D007657 2.3e-192 675.6 403 79.9
Oeu042129.1 Olea europaea HOM05D000306 ORTHO05D007657 3.3e-191 671.8 399 79.9
ClCG11G012530 Citrullus lanatus HOM05D000306 ORTHO05D007657 7.5e-191 670.6 399 79.4
Gorai.009G006500 Gossypium raimondii HOM05D000306 ORTHO05D007657 2.2e-190 669.1 399 79.9
Lj9A688T83 Lonicera japonica HOM05D000306 ORTHO05D007657 3.7e-190 668.3 410 79.0
arahy.Tifrunner.gnm1.ann1.2QW3Q9 Arachis hypogaea HOM05D000306 ORTHO05D007657 6.3e-190 667.5 406 79.1
Sabra18G0081600 Salix brachista HOM05D000306 ORTHO05D007657 6.3e-190 667.5 424 75.2
MD13G1267100 Malus domestica HOM05D000306 ORTHO05D007657 8.2e-190 667.2 399 79.7
Cc06_g13490 Coffea canephora HOM05D000306 ORTHO05D007657 1.4e-189 666.4 404 79.0
CsaV3_2G008000 Cucumis sativus L. HOM05D000306 ORTHO05D007657 1.8e-189 666.0 399 78.2
PGSC0003DMG400018753 Solanum tuberosum HOM05D000306 ORTHO05D007657 2.4e-189 665.6 399 80.5
CAN.G584.11 Capsicum annuum HOM05D000306 ORTHO05D007657 5.3e-189 664.5 399 80.2
ECA240G1428 Erigeron canadensis HOM05D000306 ORTHO05D005993 5.3e-189 664.5 399 78.9
FAN12G4153 Fragaria x ananassa HOM05D000306 ORTHO05D007657 2.0e-188 662.5 445 72.8
Nn2g12665 Nelumbo nucifera HOM05D000306 ORTHO05D007657 2.0e-188 662.5 399 77.9
Solyc07g006780.3 Solanum lycopersicum HOM05D000306 ORTHO05D007657 2.7e-188 662.1 399 80.2
Nitab4.5_0000937g0030 Nicotiana tabacum HOM05D000306 ORTHO05D007657 5.9e-188 661.0 396 79.8
HanXRQChr03g0068931 Helianthus annuus HOM05D000306 ORTHO05D007657 1.3e-187 659.8 402 77.6
Sopen07g002880 Solanum pennellii HOM05D000306 ORTHO05D007657 1.3e-187 659.8 399 79.9
Zm00001eb069070 Zea mays HOM05D000306 ORTHO05D007657 2.2e-187 659.1 397 78.6
Gohir.D05G006400 Gossypium hirsutum HOM05D000306 ORTHO05D007657 3.8e-187 658.3 399 79.4
Hund00645 Selenicereus undatus HOM05D000306 ORTHO05D007657 3.8e-187 658.3 401 77.8
DCAR_020115 Daucus carota HOM05D000306 ORTHO05D007657 5.0e-187 657.9 399 78.4
VMungo1215G2115 Vigna mungo HOM05D000306 ORTHO05D007657 6.5e-187 657.5 399 77.9
Migut.J01462 Erythranthe guttata HOM05D000306 ORTHO05D007657 1.5e-186 656.4 400 78.0
ATR0580G308 Amborella trichopoda HOM05D000306 ORTHO05D007657 6.1e-185 651.0 400 77.8
EL10Ac8g18267 Beta vulgaris HOM05D000306 ORTHO05D007657 1.4e-184 649.8 399 76.7
RcHm_v2.0_Chr4g0403081 Rosa chinensis HOM05D000306 ORTHO05D007657 1.5e-183 646.4 399 76.4
TWI34G1080 Tripterygium wilfordii HOM05D000306 ORTHO05D007657 2.6e-183 645.6 397 77.3
CANSAT11G0744 Cannabis sativa HOM05D000306 ORTHO05D007657 4.4e-183 644.8 399 76.9
Ciclev10007754m.g Citrus clementina HOM05D000306 ORTHO05D007657 3.7e-182 641.7 399 76.9
Lsat_1_v5_gn_7_54281 Lactuca sativa HOM05D000306 ORTHO05D007657 1.6e-180 636.3 406 75.9
Ca_21206_v3 Cicer arietinum L. HOM05D000306 ORTHO05D007657 2.0e-180 636.0 399 76.4
Lj4g0000904 Lotus japonicus HOM05D000306 ORTHO05D007657 2.7e-180 635.6 399 75.7
Medtr4g128640 Medicago truncatula HOM05D000306 ORTHO05D007657 4.5e-180 634.8 399 76.2
HPP92_013461 Vanilla planifolia HOM05D000306 ORTHO05D007657 7.7e-180 634.0 401 75.3
Aa31LG2G20220 Aethionema arabicum HOM05D000306 ORTHO05D007657 2.3e-179 632.5 359 85.5
Peaxi162Scf00050g00633 Petunia axillaris HOM05D000306 ORTHO05D007657 2.3e-179 632.5 399 77.9
Glyma.17G065600 Glycine max HOM05D000306 ORTHO05D007657 2.9e-179 632.1 399 75.2
Nitab4.5_0000244g0290 Nicotiana tabacum HOM05D000306 ORTHO05D007657 1.9e-178 629.4 406 77.3
vmacro13107 Vaccinium macrocarpon HOM05D000306 ORTHO05D007657 1.9e-178 629.4 511 64.0
MBI16_g41815_MAGBIO Magnolia biondii HOM05D000306 ORTHO05D007657 2.3e-176 622.5 397 75.6
Rhsim01G0007000 Rhododendron simsii HOM05D000306 ORTHO05D007657 8.8e-176 620.5 432 72.9
Sc14g0001220 Simmondsia chinensis HOM05D000306 ORTHO05D007657 1.5e-175 619.8 366 81.4
Lalb_Chr07g0180291 Lupinus albus HOM05D000306 ORTHO05D007657 1.3e-174 616.7 399 73.9
Phvul.003G148000 Phaseolus vulgaris HOM05D000306 ORTHO05D007657 2.8e-174 615.5 399 73.7
AUR62039995 Chenopodium quinoa HOM05D000306 ORTHO05D007657 6.3e-174 614.4 421 71.0
AUR62040301 Chenopodium quinoa HOM05D000306 ORTHO05D007657 6.3e-174 614.4 412 72.8
CDE04G1293 Ceratophyllum demersum HOM05D000306 ORTHO05D007657 4.1e-173 611.7 397 73.3
Gohir.A05G005700 Gossypium hirsutum HOM05D000306 ORTHO05D007657 1.0e-171 607.1 359 80.8
Hma1.2p1_1423F.1_g282590 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 3.4e-167 592.0 399 72.9
Duzib150G0020 Durio zibethinus HOM05D000306 ORTHO05D007657 9.8e-167 590.5 402 72.9
Cfa013520 Carpinus fangiana HOM05D000306 ORTHO05D007657 1.3e-166 590.1 403 73.2
ECA240G0310 Erigeron canadensis HOM05D000306 ORTHO05D007657 5.9e-164 581.3 400 71.0
Pp3c23_15560 Physcomitrium patens HOM05D000306 ORTHO05D007657 5.6e-162 574.7 401 69.6
AagrBONN_evm.TU.Sc2ySwM_117.626 Anthoceros agrestis HOM05D000306 ORTHO05D007657 1.2e-159 567.0 468 60.5
Os02g0177900 Oryza sativa ssp. japonica HOM05D000306 ORTHO05D007657 5.8e-159 564.7 351 77.2
Glyma.13G094600 Glycine max HOM05D000306 ORTHO05D007657 9.8e-159 563.9 362 74.6
TPR.G5313 Trifolium pratense HOM05D000306 ORTHO05D007657 1.7e-158 563.1 359 74.4
Mapoly0003s0282 Marchantia polymorpha HOM05D000306 ORTHO05D007657 2.0e-156 556.2 409 65.0
Atru.chr7.723 Acer truncatum HOM05D000306 ORTHO05D007657 6.8e-152 541.2 316 80.1
Nn8g40502 Nelumbo nucifera HOM05D000306 ORTHO05D007657 8.6e-147 524.2 318 78.9
TAR383G0632 Trochodendron aralioides HOM05D000306 ORTHO05D007657 2.8e-145 519.2 306 79.4
Hma1.2p1_0342F.1_g130620 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 9.9e-135 484.2 389 65.3
Psat4g012000 Pisum sativum HOM05D000306 ORTHO05D007657 4.6e-132 475.3 292 76.7
Hund00646 Selenicereus undatus HOM05D000306 ORTHO05D007657 1.0e-131 474.2 359 66.3
SEGI_13713 Sequoiadendron giganteum HOM05D000306 ORTHO05D007657 1.9e-130 469.9 300 72.0
SMO239G0169 Selaginella moellendorffii HOM05D000306 ORTHO05D007657 1.1e-125 454.1 401 58.4
SGA_v2.0_scaffold69G23280 Striga asiatica HOM05D000306 ORTHO05D007657 1.1e-120 437.6 291 72.5
Aqoxy3G01085 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 3.4e-119 432.6 267 77.5
CSS0008880 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D007657 2.9e-110 402.9 240 80.8
RcHm_v2.0_Chr4g0405011 Rosa chinensis HOM05D000306 ORTHO05D007657 6.3e-89 332.0 203 77.8
MELO3C004085.2 Cucumis melo HOM05D000306 ORTHO05D007657 1.2e-84 317.8 194 76.3
Aqoxy1G02891 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 3.1e-80 303.1 210 71.4
Aqoxy3G01524 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 3.0e-75 286.6 175 78.9
Haze_26997 Corylus avellana HOM05D000306 ORTHO05D007657 4.8e-73 279.3 392 39.5
Cfa026537 Carpinus fangiana HOM05D000306 ORTHO05D007657 1.2e-63 248.1 418 36.4
Aqoxy1G03516 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 5.9e-55 219.2 189 63.0
MELO3C000682.2 Cucumis melo HOM05D000306 ORTHO05D007657 4.0e-51 206.5 122 79.5
SHI02941 Sapria himalayana HOM05D000306 ORTHO05D007657 2.1e-36 157.5 114 71.1
MELO3C028573.2 Cucumis melo HOM05D000306 ORTHO05D007657 1.1e-32 145.2 104 62.5
Nn2g14416 Nelumbo nucifera HOM05D000306 ORTHO05D007657 1.1e-27 128.6 62 87.1
Pp3s30_470 Physcomitrium patens HOM05D000306 ORTHO05D317356 8.4e-25 119.0 304 33.9
SEGI_34135 Sequoiadendron giganteum HOM05D000306 ORTHO05D030075 3.5e-23 113.6 69 81.2
QL02p086401 Quercus lobata HOM05D000306 ORTHO05D007657 1.0e-22 112.1 82 68.3
Cre12.g543902 Chlamydomonas reinhardtii HOM05D000306 ORTHO05D007657 1.1e-21 108.6 298 30.2
QL02p097096 Quercus lobata HOM05D000306 ORTHO05D007657 3.3e-21 107.1 82 65.9
MCO11G321 Micromonas commoda HOM05D002248 ORTHO05D006121 1.4e-19 101.7 339 26.8
RcHm_v2.0_Chr4g0405021 Rosa chinensis HOM05D000306 ORTHO05D030075 1.3e-17 95.1 59 78.0
QL02p097130 Quercus lobata HOM05D000306 ORTHO05D007657 9.3e-16 89.0 66 68.2
MD07G1169000 Malus domestica HOM05D000306 ORTHO05D030075 1.2e-15 88.6 56 80.4
Pp3s42_220 Physcomitrium patens HOM05D003206 ORTHO05D310700 1.2e-10 72.0 144 31.2
TPR.G20440 Trifolium pratense HOM05D000306 ORTHO05D050985 1.5e-10 71.6 41 80.5
SEGI_29302 Sequoiadendron giganteum HOM05D000306 ORTHO05D050985 4.2e-08 63.5 41 73.2
arahy.Tifrunner.gnm1.ann1.MK7H36 Arachis hypogaea HOM05D000306 ORTHO05D007657 1.6e-07 61.6 35 74.3
QL02p097186 Quercus lobata HOM05D000306 ORTHO05D030075 3.5e-07 60.5 42 71.4
Haze_26576 Corylus avellana HOM05D003206 ORTHO05D164003 8.7e-06 55.8 153 29.4
Glyma.07G028600 Glycine max HOM05D003206 ORTHO05D005207 8.7e-06 55.8 137 27.0


User provided reference genes

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