Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR237030 Cardamine hirsuta HOM05D009471 ORTHO05D011939 2.8e-38 161.4 78 100.0
AT4G29285 Arabidopsis thaliana HOM05D009471 ORTHO05D011939 3.2e-26 121.3 78 73.1
Carub.0007s1128 Capsella rubella HOM05D009471 ORTHO05D011939 6.8e-24 113.6 78 69.2
AT4G13095 Arabidopsis thaliana HOM05D009471 ORTHO05D011939 8.8e-24 113.2 79 69.6
Thhalv10026716m.g Eutrema salsugineum HOM05D009471 ORTHO05D011939 4.4e-23 110.9 78 66.7
AL7G23160 Arabidopsis lyrata HOM05D009471 ORTHO05D011939 2.8e-22 108.2 66 75.8
BolC7t46164H Brassica oleracea HOM05D009471 ORTHO05D011939 5.4e-21 104.0 80 67.5
BraA09t41701Z Brassica rapa HOM05D009471 ORTHO05D011939 5.4e-21 104.0 80 67.5
A09p63510 Brassica napus HOM05D009471 ORTHO05D011939 1.2e-20 102.8 80 66.2
A03p58890 Brassica napus HOM05D009471 ORTHO05D011939 2.7e-20 101.7 80 66.2
C07p56860 Brassica napus HOM05D009471 ORTHO05D011939 2.7e-20 101.7 80 66.2
BraA03t14949Z Brassica rapa HOM05D009471 ORTHO05D011939 2.7e-20 101.7 80 66.2
BcaB08g36157 Brassica carinata HOM05D009471 ORTHO05D011939 1.0e-19 99.8 80 65.0
BolC7t46162H Brassica oleracea HOM05D009471 ORTHO05D011939 1.7e-19 99.0 78 62.8
A03p58880 Brassica napus HOM05D009471 ORTHO05D011939 2.9e-19 98.2 78 61.5
BraA03t14948Z Brassica rapa HOM05D009471 ORTHO05D011939 2.9e-19 98.2 78 61.5
BolC7t46163H Brassica oleracea HOM05D009471 ORTHO05D011939 5.5e-18 94.0 66 71.2
BraA07t30656Z Brassica rapa HOM05D009471 ORTHO05D011939 1.5e-15 85.9 78 57.7
BolC6t38591H Brassica oleracea HOM05D009471 ORTHO05D011939 4.4e-15 84.3 78 57.7
C06p34890 Brassica napus HOM05D009471 ORTHO05D011939 1.3e-14 82.8 78 56.4
Carub.0007s1132 Capsella rubella HOM05D009471 ORTHO05D011939 1.7e-14 82.4 78 50.0
A07p30190 Brassica napus HOM05D009471 ORTHO05D011939 2.2e-14 82.0 78 55.1
C07p56850 Brassica napus HOM05D009471 ORTHO05D011939 6.3e-14 80.5 59 64.4
C06p34930 Brassica napus HOM05D009471 ORTHO05D011939 2.4e-13 78.6 78 55.1
Aa31LG2G21160 Aethionema arabicum HOM05D009471 ORTHO05D011939 7.8e-12 73.6 84 51.2
CARHR237040 Cardamine hirsuta HOM05D009471 ORTHO05D011939 4.3e-10 67.8 79 49.4
AT4G19905 Arabidopsis thaliana HOM05D009471 ORTHO05D038604 1.6e-09 65.9 80 51.2
AL7G34020 Arabidopsis lyrata HOM05D009471 ORTHO05D038604 2.1e-09 65.5 79 50.6
Sopen10g013920 Solanum pennellii HOM05D010058 ORTHO05D010053 5.2e-08 60.8 80 43.8
Carub.0007s1127 Capsella rubella HOM05D008236 ORTHO05D010394 2.9e-06 55.1 81 42.0
Carub.0007s1126 Capsella rubella HOM05D008236 ORTHO05D010394 8.3e-06 53.5 82 41.5


User provided reference genes

Program Settings