Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR236460 Cardamine hirsuta HOM05D001799 ORTHO05D001655 2.0e-140 503.4 521 100.0
AL7G23840 Arabidopsis lyrata HOM05D001799 ORTHO05D001655 2.7e-36 157.5 189 49.2
Carub.0007s1197 Capsella rubella HOM05D001799 ORTHO05D001655 2.4e-32 144.4 214 41.1
Sp7g26660 Schrenkiella parvula HOM05D001799 ORTHO05D001655 5.0e-30 136.7 184 44.0
AT4G28690 Arabidopsis thaliana HOM05D001799 ORTHO05D001655 1.9e-29 134.8 195 42.6
Thhalv10027052m.g Eutrema salsugineum HOM05D001799 ORTHO05D001655 2.1e-28 131.3 185 41.6
Aa31LG8G17290 Aethionema arabicum HOM05D001799 ORTHO05D001655 2.7e-20 104.4 109 49.5
Thhalv10001979m.g Eutrema salsugineum HOM05D001799 ORTHO05D001655 2.7e-20 104.4 110 50.0
AT2G20310 Arabidopsis thaliana HOM05D001799 ORTHO05D001655 3.0e-19 100.9 168 38.1
THA.LOC104814538 Tarenaya hassleriana HOM05D001799 ORTHO05D001655 2.0e-18 98.2 107 48.6
BolC1t01046H Brassica oleracea HOM05D001799 ORTHO05D001655 2.6e-18 97.8 151 39.7
AL3G53260 Arabidopsis lyrata HOM05D001799 ORTHO05D001655 5.7e-18 96.7 119 46.2
Carub.0003s3465 Capsella rubella HOM05D001799 ORTHO05D001655 9.8e-18 95.9 108 47.2
CARHR110800 Cardamine hirsuta HOM05D001799 ORTHO05D001655 1.3e-17 95.5 177 37.3
C01p10840 Brassica napus HOM05D000834 ORTHO05D000909 2.8e-17 94.4 95 48.4
BraA01t00869Z Brassica rapa HOM05D001799 ORTHO05D001655 2.8e-17 94.4 95 47.4
A01p09260 Brassica napus HOM05D000834 ORTHO05D000909 4.8e-17 93.6 120 40.8
BcaC06g36714 Brassica carinata HOM05D001799 ORTHO05D001655 6.3e-17 93.2 102 47.1
BolC7t40521H Brassica oleracea HOM05D001799 ORTHO05D001655 6.3e-17 93.2 102 47.1
BraA07t27832Z Brassica rapa HOM05D001799 ORTHO05D001655 6.3e-17 93.2 101 44.6
BcaNung06060 Brassica carinata HOM05D001799 ORTHO05D001655 1.4e-16 92.0 165 37.0
A07p00400 Brassica napus HOM05D001799 ORTHO05D001655 1.4e-16 92.0 182 33.5
BcaNung01377 Brassica carinata HOM05D001799 ORTHO05D001655 2.4e-16 91.3 177 35.6
BcaNung01378 Brassica carinata HOM05D001799 ORTHO05D001655 2.4e-16 91.3 177 35.6
BolC1t01047H Brassica oleracea HOM05D001799 ORTHO05D001655 2.4e-16 91.3 177 35.6
BcaNung04699 Brassica carinata HOM05D001799 ORTHO05D001655 4.1e-16 90.5 178 36.5
BcaB07g31599 Brassica carinata HOM05D001799 ORTHO05D001655 7.0e-16 89.7 155 35.5
BolC9t54423H Brassica oleracea HOM05D001799 ORTHO05D001655 2.0e-15 88.2 152 36.8
C07p00820 Brassica napus HOM05D001799 ORTHO05D001655 1.0e-14 85.9 154 32.5
C09p15170 Brassica napus HOM05D001799 ORTHO05D001655 1.0e-14 85.9 152 36.2
BraA09t36924Z Brassica rapa HOM05D001799 ORTHO05D001655 5.0e-14 83.6 150 34.0
Manes.12G038900 Manihot esculenta HOM05D001799 ORTHO05D001655 5.0e-14 83.6 114 40.4
Nn1g03020 Nelumbo nucifera HOM05D001799 ORTHO05D001655 5.0e-14 83.6 159 35.2
Thecc.01G247900 Theobroma cacao HOM05D001799 ORTHO05D001655 8.5e-14 82.8 119 40.3
Potri.002G255400 Populus trichocarpa HOM05D001799 ORTHO05D001655 1.1e-13 82.4 124 37.1
Gorai.007G150500 Gossypium raimondii HOM05D001799 ORTHO05D001655 1.9e-13 81.6 140 35.0
Duzib133G0885 Durio zibethinus HOM05D001799 ORTHO05D001655 4.2e-13 80.5 50 66.0
Cpa.g.sc87.53 Carica papaya HOM05D001799 ORTHO05D001655 5.5e-13 80.1 112 43.8
Ca_08756_v3 Cicer arietinum L. HOM05D001799 ORTHO05D001655 5.5e-13 80.1 96 41.7
MBI07_g23235_MAGBIO Magnolia biondii HOM05D001799 ORTHO05D001655 7.2e-13 79.7 117 35.0
CDE08G1688 Ceratophyllum demersum HOM05D001799 ORTHO05D001655 9.4e-13 79.3 49 61.2
PSO764G0262 Papaver somniferum HOM05D001799 ORTHO05D001655 9.4e-13 79.3 149 38.3
PSO832G2966 Papaver somniferum HOM05D001799 ORTHO05D001655 9.4e-13 79.3 149 38.3
CSS0002635 Camellia sinensis var. sinensis HOM05D001799 ORTHO05D001655 1.2e-12 79.0 100 39.0
BcaNung04796 Brassica carinata HOM05D001799 ORTHO05D001655 1.6e-12 78.6 153 36.6
Gohir.A11G134200 Gossypium hirsutum HOM05D001799 ORTHO05D001655 2.1e-12 78.2 48 62.5
MBI10_g26045_MAGBIO Magnolia biondii HOM05D001799 ORTHO05D001655 2.1e-12 78.2 50 56.0
Manes.13G038700 Manihot esculenta HOM05D001799 ORTHO05D001655 2.1e-12 78.2 52 59.6
Rhsim01G0259600 Rhododendron simsii HOM05D001799 ORTHO05D001655 2.7e-12 77.8 51 56.9
SGA_v2.0_scaffold1G00676 Striga asiatica HOM05D001799 ORTHO05D001655 2.7e-12 77.8 149 34.2
CDE02G4490 Ceratophyllum demersum HOM05D000219 ORTHO05D001655 3.6e-12 77.4 50 58.0
Gohir.A08G046000 Gossypium hirsutum HOM05D001799 ORTHO05D001655 3.6e-12 77.4 141 36.9
Hma1.2p1_1224F.1_g268440 Hydrangea macrophylla HOM05D001799 ORTHO05D001655 3.6e-12 77.4 82 41.5
GSVIVG01028449001 Vitis vinifera HOM05D001799 ORTHO05D001655 3.6e-12 77.4 110 40.0
A09p12810 Brassica napus HOM05D001799 ORTHO05D001655 4.7e-12 77.0 153 34.6
Gohir.D11G140300 Gossypium hirsutum HOM05D001799 ORTHO05D001655 4.7e-12 77.0 116 41.4
Phvul.007G153900 Phaseolus vulgaris HOM05D001799 ORTHO05D001655 6.1e-12 76.6 138 37.0
EL10Ac7g17710 Beta vulgaris HOM05D001799 ORTHO05D001655 1.0e-11 75.9 68 50.0
Cc01_g17690 Coffea canephora HOM05D001799 ORTHO05D001655 1.0e-11 75.9 152 33.6
COL.COLO4_20962 Corchorus olitorius HOM05D001799 ORTHO05D001655 1.0e-11 75.9 52 57.7
Migut.D00488 Erythranthe guttata HOM05D001799 ORTHO05D001655 1.0e-11 75.9 158 31.6
Sabra02G0194000 Salix brachista HOM05D006210 ORTHO05D007510 1.0e-11 75.9 52 57.7
TAR633G1919 Trochodendron aralioides HOM05D001799 ORTHO05D001655 1.4e-11 75.5 117 38.5
Lj5g0010621 Lotus japonicus HOM05D001799 ORTHO05D001655 1.8e-11 75.1 53 58.5
Nn3g19824 Nelumbo nucifera HOM05D001799 ORTHO05D001655 1.8e-11 75.1 50 56.0
arahy.Tifrunner.gnm1.ann1.XD4QRI Arachis hypogaea HOM05D001799 ORTHO05D001655 2.3e-11 74.7 53 56.6
Ciclev10019675m.g Citrus clementina HOM05D001799 ORTHO05D001655 2.3e-11 74.7 156 32.1
SalBow4G1659 Salvia bowleyana HOM05D001799 ORTHO05D001655 2.3e-11 74.7 43 62.8
arahy.Tifrunner.gnm1.ann1.2D12SM Arachis hypogaea HOM05D001799 ORTHO05D001655 3.0e-11 74.3 51 56.9
Lalb_Chr02g0152781 Lupinus albus HOM05D001799 ORTHO05D001655 4.0e-11 73.9 54 57.4
Aqoxy1G02019 Aquilegia oxysepala HOM05D001799 ORTHO05D001655 5.2e-11 73.6 52 57.7
Gohir.D08G056500 Gossypium hirsutum HOM05D001799 ORTHO05D001655 5.2e-11 73.6 50 56.0
Gorai.004G057600 Gossypium raimondii HOM05D001799 ORTHO05D001655 5.2e-11 73.6 50 56.0
Glyma.03G168500 Glycine max HOM05D001799 ORTHO05D001655 6.8e-11 73.2 53 49.1
Psat6g064480 Pisum sativum HOM05D001799 ORTHO05D001655 6.8e-11 73.2 107 38.3
CiPaw.03G272100 Carya illinoinensis HOM05D001799 ORTHO05D001655 8.8e-11 72.8 51 51.0
Glyma.13G127600 Glycine max HOM05D001799 ORTHO05D001655 1.2e-10 72.4 178 31.5
TPR.G35718 Trifolium pratense HOM05D001799 ORTHO05D001655 1.2e-10 72.4 150 33.3
GSVIVG01038201001 Vitis vinifera HOM05D001799 ORTHO05D001655 1.2e-10 72.4 51 52.9
Ah.08g213690 Amaranthus hybridus HOM05D001799 ORTHO05D001655 1.5e-10 72.0 53 56.6
Medtr7g099000 Medicago truncatula HOM05D001799 ORTHO05D001655 1.5e-10 72.0 81 42.0
Sopen09g025540 Solanum pennellii HOM05D001799 ORTHO05D001655 1.5e-10 72.0 65 49.2
MSTRG.18361 Avicennia marina HOM05D001799 ORTHO05D001655 2.0e-10 71.6 46 58.7
Hma1.2p1_2051F.1_g312570 Hydrangea macrophylla HOM05D001799 ORTHO05D001655 2.0e-10 71.6 151 33.8
Ca_09641_v3 Cicer arietinum L. HOM05D001799 ORTHO05D001655 2.6e-10 71.2 53 52.8
Glyma.19G169900 Glycine max HOM05D001799 ORTHO05D001655 2.6e-10 71.2 53 52.8
Oeu039650.1 Olea europaea HOM05D001799 ORTHO05D001655 2.6e-10 71.2 160 30.6
PGSC0003DMG400007720 Solanum tuberosum HOM05D001799 ORTHO05D001655 2.6e-10 71.2 120 36.7
Aqoxy1G01804 Aquilegia oxysepala HOM05D001799 ORTHO05D001655 3.4e-10 70.9 42 59.5
Dinv43054 Davidia involucrata HOM05D001799 ORTHO05D001655 3.4e-10 70.9 107 43.0
Duzib211G0692 Durio zibethinus HOM05D001799 ORTHO05D001655 3.4e-10 70.9 138 34.1
Peaxi162Scf00043g02315 Petunia axillaris HOM05D001799 ORTHO05D001655 3.4e-10 70.9 40 67.5
CANSAT01G0634 Cannabis sativa HOM05D001799 ORTHO05D001655 4.4e-10 70.5 122 36.1
Cfa002496 Carpinus fangiana HOM05D006210 ORTHO05D007510 4.4e-10 70.5 51 51.0
Solyc09g064420.4 Solanum lycopersicum HOM05D001799 ORTHO05D001655 4.4e-10 70.5 65 47.7
Atru.chr5.1957 Acer truncatum HOM05D001799 ORTHO05D001655 5.7e-10 70.1 49 55.1
Eucgr.K01404 Eucalyptus grandis HOM05D001799 ORTHO05D001655 5.7e-10 70.1 51 56.9
Medtr1g069440 Medicago truncatula HOM05D001799 ORTHO05D001655 5.7e-10 70.1 149 31.5
TPR.G20063 Trifolium pratense HOM05D001799 ORTHO05D001655 5.7e-10 70.1 78 46.2
Aqoxy5G00108 Aquilegia oxysepala HOM05D001799 ORTHO05D001655 7.5e-10 69.7 162 29.6
Duzib138G0086 Durio zibethinus HOM05D001799 ORTHO05D001655 7.5e-10 69.7 57 49.1
Lsat_1_v5_gn_5_180101 Lactuca sativa HOM05D001799 ORTHO05D001655 7.5e-10 69.7 46 52.2
Rhsim13G0040600 Rhododendron simsii HOM05D001799 ORTHO05D001655 7.5e-10 69.7 50 52.0
vmacro02715 Vaccinium macrocarpon HOM05D001799 ORTHO05D001655 7.5e-10 69.7 50 50.0
Actinidia23705 Actinidia chinensis HOM05D001799 ORTHO05D001655 9.8e-10 69.3 125 34.4
Lj1g0015523 Lotus japonicus HOM05D001799 ORTHO05D001655 9.8e-10 69.3 56 51.8
Medtr7g098950 Medicago truncatula HOM05D001799 ORTHO05D001655 9.8e-10 69.3 96 35.4
vmacro14789 Vaccinium macrocarpon HOM05D001799 ORTHO05D001655 9.8e-10 69.3 49 49.0
AUR62008817 Chenopodium quinoa HOM05D001799 ORTHO05D001655 1.3e-09 68.9 63 54.0
Haze_24721 Corylus avellana HOM05D001799 ORTHO05D001655 1.3e-09 68.9 51 49.0
Oeu052094.1 Olea europaea HOM05D001799 ORTHO05D001655 1.3e-09 68.9 48 52.1
Prupe.8G213400 Prunus persica HOM05D001799 ORTHO05D001655 1.3e-09 68.9 107 36.4
TAR349G0003 Trochodendron aralioides HOM05D001799 ORTHO05D001655 1.7e-09 68.6 50 56.0
HanXRQChr01g0014871 Helianthus annuus HOM05D001799 ORTHO05D001655 2.8e-09 67.8 45 53.3
Lalb_Chr20g0113491 Lupinus albus HOM05D001799 ORTHO05D001655 2.8e-09 67.8 49 49.0
Nitab4.5_0000392g0080 Nicotiana tabacum HOM05D001799 ORTHO05D001655 2.8e-09 67.8 99 37.4
AUR62025422 Chenopodium quinoa HOM05D001799 ORTHO05D001655 3.7e-09 67.4 42 64.3
MD10G1174400 Malus domestica HOM05D001799 ORTHO05D001655 3.7e-09 67.4 51 49.0
Nitab4.5_0000385g0050 Nicotiana tabacum HOM05D001799 ORTHO05D001655 3.7e-09 67.4 43 62.8
Oeu026802.3 Olea europaea HOM05D001799 ORTHO05D001655 3.7e-09 67.4 94 35.1
Aqoxy1G01801 Aquilegia oxysepala HOM05D001799 ORTHO05D001655 4.9e-09 67.0 43 55.8
Aqoxy1G01803 Aquilegia oxysepala HOM05D001799 ORTHO05D001655 4.9e-09 67.0 43 55.8
MD05G1186600 Malus domestica HOM05D001799 ORTHO05D001655 4.9e-09 67.0 48 54.2
Psat3g052240 Pisum sativum HOM05D001799 ORTHO05D001655 4.9e-09 67.0 79 39.2
Eucgr.K01406 Eucalyptus grandis HOM05D001799 ORTHO05D001655 6.3e-09 66.6 44 56.8
PGR044G0994 Punica granatum HOM05D001799 ORTHO05D001655 6.3e-09 66.6 39 61.5
Hund05495 Selenicereus undatus HOM05D001799 ORTHO05D001655 8.3e-09 66.2 50 54.0
TWI18G0889 Tripterygium wilfordii HOM05D001799 ORTHO05D001655 8.3e-09 66.2 51 47.1
ECA248G2600 Erigeron canadensis HOM05D001799 ORTHO05D001655 1.8e-08 65.1 43 55.8
ECA248G2623 Erigeron canadensis HOM05D001799 ORTHO05D001655 1.8e-08 65.1 43 53.5
arahy.Tifrunner.gnm1.ann1.TYPP4C Arachis hypogaea HOM05D001799 ORTHO05D001655 2.4e-08 64.7 72 40.3
HanXRQChr04g0107651 Helianthus annuus HOM05D001799 ORTHO05D001655 7.0e-08 63.2 136 30.9
Os10g0466000 Oryza sativa ssp. japonica HOM05D001799 ORTHO05D001655 7.0e-08 63.2 43 53.5
RcHm_v2.0_Chr6g0286061 Rosa chinensis HOM05D001799 ORTHO05D001655 7.0e-08 63.2 82 39.0
VMungo0720G1377 Vigna mungo HOM05D001799 ORTHO05D001655 7.0e-08 63.2 143 34.3
arahy.Tifrunner.gnm1.ann1.FR0W00 Arachis hypogaea HOM05D001799 ORTHO05D001655 9.2e-08 62.8 53 45.3
Sc17g0002870 Simmondsia chinensis HOM05D001799 ORTHO05D001655 9.2e-08 62.8 56 42.9
TWI75G0966 Tripterygium wilfordii HOM05D001799 ORTHO05D001655 9.2e-08 62.8 142 28.9
Zm00001eb046350 Zea mays HOM05D001799 ORTHO05D001655 9.2e-08 62.8 161 29.8
FAN15G1895 Fragaria x ananassa HOM05D001799 ORTHO05D001655 1.6e-07 62.0 50 46.0
Lsat_1_v5_gn_8_91040 Lactuca sativa HOM05D001799 ORTHO05D001655 1.6e-07 62.0 48 50.0
FvH4_2g20270 Fragaria vesca HOM05D001799 ORTHO05D001655 3.5e-07 60.8 140 31.4
FAN24G0159 Fragaria x ananassa HOM05D001799 ORTHO05D001655 3.5e-07 60.8 140 31.4
SGA_v2.0_scaffold29G12192 Striga asiatica HOM05D001799 ORTHO05D001655 3.5e-07 60.8 51 47.1
Os03g0140900 Oryza sativa ssp. japonica HOM05D001799 ORTHO05D001655 4.5e-07 60.5 45 46.7
ATR0787G016 Amborella trichopoda HOM05D001799 ORTHO05D001655 5.9e-07 60.1 48 47.9
ECA236G3571 Erigeron canadensis HOM05D001799 ORTHO05D001655 7.7e-07 59.7 40 52.5
FAN24G0550 Fragaria x ananassa HOM05D001799 ORTHO05D001655 7.7e-07 59.7 140 31.4
FAN27G1083 Fragaria x ananassa HOM05D001799 ORTHO05D001655 7.7e-07 59.7 140 31.4
SEGI_05533 Sequoiadendron giganteum HOM05D001799 ORTHO05D001655 7.7e-07 59.7 87 40.2
Pp3c20_15130 Physcomitrium patens HOM05D001799 ORTHO05D001655 1.0e-06 59.3 51 52.9
QL09p042405 Quercus lobata HOM05D001799 ORTHO05D001655 1.0e-06 59.3 120 34.2
CAN.G119.8 Capsicum annuum HOM05D001799 ORTHO05D001655 1.3e-06 58.9 116 31.0
unitig_22.g6311 Utricularia gibba HOM05D001799 ORTHO05D001655 2.3e-06 58.2 127 34.6


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