Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 2.0e-78 295.8 163 100.0
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 7.7e-62 240.7 158 81.0
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 7.2e-60 234.2 158 79.7
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 2.1e-59 232.6 158 80.4
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 7.4e-57 224.2 161 75.2
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 8.5e-53 210.7 166 71.1
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 1.9e-52 209.5 164 72.6
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 8.0e-51 204.1 171 69.6
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 3.9e-50 201.8 172 69.2
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 5.2e-50 201.4 166 69.9
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 2.6e-49 199.1 172 69.2
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 2.8e-48 195.7 172 68.0
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 4.8e-48 194.9 166 68.7
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 4.8e-48 194.9 166 68.7
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 1.1e-44 183.7 165 65.5
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 5.7e-41 171.4 158 65.2
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 3.1e-39 165.6 118 73.7
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 1.6e-30 136.7 157 53.5
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 2.0e-30 136.3 121 62.8
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 2.7e-30 136.0 155 55.5
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 5.9e-30 134.8 134 58.2
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 1.7e-29 133.3 125 60.0
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 2.3e-29 132.9 114 62.3
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 2.3e-29 132.9 153 55.6
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 5.0e-29 131.7 141 56.0
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 6.6e-29 131.3 141 56.0
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 8.6e-29 131.0 154 51.9
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 1.5e-28 130.2 115 59.1
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 4.2e-28 128.6 141 54.6
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 5.5e-28 128.3 118 59.3
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 7.2e-28 127.9 113 61.1
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 9.5e-28 127.5 114 57.9
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 1.6e-27 126.7 133 55.6
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 2.8e-27 125.9 136 50.7
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 3.6e-27 125.6 139 54.7
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 1.0e-26 124.0 113 59.3
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 1.0e-26 124.0 113 58.4
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 1.0e-26 124.0 112 59.8
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 1.8e-26 123.2 117 56.4
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 2.3e-26 122.9 113 58.4
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 3.0e-26 122.5 126 55.6
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 6.8e-26 121.3 113 57.5
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 1.2e-25 120.6 115 60.0
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 1.5e-25 120.2 132 51.5
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 1.5e-25 120.2 144 50.7
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 2.0e-25 119.8 114 57.9
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 3.4e-25 119.0 113 58.4
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 3.4e-25 119.0 114 55.3
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 3.4e-25 119.0 140 51.4
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 5.7e-25 118.2 103 62.1
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 5.7e-25 118.2 139 51.1
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 1.3e-24 117.1 111 57.7
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 1.7e-24 116.7 113 55.8
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 2.2e-24 116.3 111 58.6
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 2.8e-24 115.9 116 55.2
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 4.9e-24 115.2 113 54.9
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 4.9e-24 115.2 113 55.8
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 6.3e-24 114.8 103 59.2
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 8.3e-24 114.4 114 57.9
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 2.4e-23 112.8 97 64.9
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 3.2e-23 112.5 134 52.2
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 3.2e-23 112.5 130 53.1
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 4.1e-23 112.1 114 54.4
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 5.4e-23 111.7 112 57.1
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 7.0e-23 111.3 104 59.6
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 7.0e-23 111.3 103 58.3
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 1.2e-22 110.5 130 49.2
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 1.6e-22 110.2 141 46.8
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 1.6e-22 110.2 112 56.2
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 2.0e-22 109.8 110 54.5
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 5.9e-22 108.2 112 55.4
vmacro13080 Vaccinium macrocarpon HOM05D007179 ORTHO05D009124 1.3e-21 107.1 75 72.0
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 1.7e-21 106.7 102 56.9
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 2.3e-21 106.3 95 61.1
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 2.9e-21 105.9 113 53.1
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 3.9e-21 105.5 93 60.2
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 5.0e-21 105.1 102 57.8
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 5.0e-21 105.1 116 56.0
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 5.0e-21 105.1 112 54.5
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 6.6e-21 104.8 101 57.4
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 6.6e-21 104.8 110 54.5
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 6.6e-21 104.8 113 54.9
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 8.6e-21 104.4 96 59.4
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 8.6e-21 104.4 95 60.0
FAN22G0121 Fragaria x ananassa HOM05D007179 ORTHO05D009124 8.6e-21 104.4 73 72.6
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 8.6e-21 104.4 75 69.3
BcaC09g50519 Brassica carinata HOM05D000147 ORTHO05D013131 9.5e-20 100.9 61 80.3
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 2.1e-19 99.8 75 66.7
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 3.6e-19 99.0 149 42.3
FAN17G2417 Fragaria x ananassa HOM05D007179 ORTHO05D009124 3.6e-19 99.0 71 71.8
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 2.3e-18 96.3 67 73.1
Nitab4.5_0002004g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 6.8e-18 94.7 71 70.4
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 1.5e-17 93.6 64 71.9
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 1.5e-17 93.6 73 63.0
HPP92_018535 Vanilla planifolia HOM05D007179 ORTHO05D009124 2.6e-17 92.8 73 60.3
Mapoly0124s0027 Marchantia polymorpha HOM05D007179 ORTHO05D009124 7.5e-17 91.3 139 42.4
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 1.3e-16 90.5 110 50.9
CDE02G2992 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 1.1e-15 87.4 73 58.9
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 1.1e-15 87.4 95 51.6
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 1.4e-15 87.0 73 60.3
Zm00001eb246810 Zea mays HOM05D007179 ORTHO05D009124 4.1e-15 85.5 61 70.5
SMO358G0032 Selaginella moellendorffii HOM05D007179 ORTHO05D009124 1.6e-14 83.6 67 61.2
Medtr4g129300 Medicago truncatula HOM05D007179 ORTHO05D009124 1.3e-13 80.5 57 68.4
AagrBONN_evm.TU.Sc2ySwM_362.2423 Anthoceros agrestis HOM05D007179 ORTHO05D009124 1.7e-13 80.1 67 58.2
Pp3c12_25950 Physcomitrium patens HOM05D007179 ORTHO05D009124 1.7e-13 80.1 126 39.7
SGA_v2.0_scaffold325G48698 Striga asiatica HOM05D007179 ORTHO05D009124 8.0e-11 71.2 63 60.3
Haze_22156 Corylus avellana HOM05D007179 ORTHO05D009124 4.4e-09 65.5 86 47.7
BcaC09g50518 Brassica carinata HOM05D005733 ORTHO05D007442 2.2e-08 63.2 78 53.8
Haze_22155 Corylus avellana HOM05D007179 ORTHO05D009124 3.7e-08 62.4 41 70.7


User provided reference genes

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