Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 3.6e-169 598.2 313 100.0
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 3.0e-163 578.6 313 95.8
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 8.7e-163 577.0 313 96.2
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 8.7e-163 577.0 313 95.2
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 9.0e-160 567.0 313 94.2
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 3.4e-159 565.1 313 93.6
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 1.8e-152 542.7 313 91.1
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 3.1e-152 542.0 313 90.7
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 1.2e-151 540.0 314 90.8
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 2.0e-151 539.3 314 90.8
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 4.5e-151 538.1 313 90.4
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 5.8e-151 537.7 314 90.4
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 5.8e-151 537.7 314 90.4
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 5.8e-151 537.7 314 90.8
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 1.3e-150 536.6 314 90.4
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 1.2e-148 530.0 313 88.5
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 3.5e-148 528.5 313 89.5
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 1.3e-126 456.8 312 76.0
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 1.3e-126 456.8 317 78.2
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 6.5e-126 454.5 312 75.6
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 6.5e-126 454.5 328 73.5
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 8.5e-126 454.1 312 75.3
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 1.4e-125 453.4 313 75.7
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 1.9e-125 453.0 324 73.8
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 1.8e-123 446.4 279 80.6
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 3.0e-123 445.7 279 80.6
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 2.0e-122 443.0 278 80.6
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 2.6e-122 442.6 327 71.6
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 4.8e-121 438.3 302 75.5
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 6.3e-121 438.0 269 82.2
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 6.3e-121 438.0 269 82.2
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 8.2e-121 437.6 304 75.0
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 1.1e-120 437.2 301 75.1
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.4e-120 436.8 269 81.8
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 1.8e-120 436.4 321 71.0
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 2.4e-120 436.0 276 78.6
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 4.1e-120 435.3 268 81.3
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 4.1e-120 435.3 331 71.6
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 7.0e-120 434.5 320 72.2
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 7.0e-120 434.5 316 72.5
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 2.6e-119 432.6 321 71.0
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 2.6e-119 432.6 314 71.7
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 3.4e-119 432.2 319 71.8
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 3.4e-119 432.2 272 79.8
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 4.5e-119 431.8 271 80.4
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 1.0e-118 430.6 299 73.9
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 1.3e-118 430.3 299 74.6
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 1.3e-118 430.3 302 74.2
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 1.7e-118 429.9 288 76.0
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 1.7e-118 429.9 314 72.3
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 1.7e-118 429.9 330 68.5
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 2.2e-118 429.5 284 75.7
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 2.2e-118 429.5 305 73.4
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 2.9e-118 429.1 321 71.0
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 2.9e-118 429.1 325 71.1
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 3.8e-118 428.7 280 77.5
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 5.0e-118 428.3 321 70.1
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 6.5e-118 427.9 284 75.7
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 8.5e-118 427.6 296 75.7
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 1.1e-117 427.2 297 74.4
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 1.1e-117 427.2 314 70.7
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 1.1e-117 427.2 317 71.0
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 1.4e-117 426.8 296 74.3
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 1.4e-117 426.8 325 70.8
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 1.9e-117 426.4 299 73.2
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 3.2e-117 425.6 298 73.5
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 3.2e-117 425.6 285 77.5
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 4.2e-117 425.2 307 71.0
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 5.5e-117 424.9 324 70.4
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 5.5e-117 424.9 319 70.8
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 1.2e-116 423.7 280 77.5
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 2.7e-116 422.5 299 73.6
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 6.1e-116 421.4 297 73.1
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 6.1e-116 421.4 311 70.7
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 8.0e-116 421.0 330 69.1
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 1.4e-115 420.2 276 77.9
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 2.3e-115 419.5 271 78.2
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 2.0e-114 416.4 286 75.5
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 2.0e-114 416.4 281 75.1
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 2.6e-114 416.0 313 70.3
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 8.2e-113 411.0 319 69.3
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 1.6e-111 406.8 319 67.7
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 5.0e-110 401.7 231 84.4
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 5.0e-110 401.7 231 84.4
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 6.5e-110 401.4 317 67.5
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 1.9e-109 399.8 323 67.5
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 4.2e-109 398.7 275 74.2
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 2.7e-108 396.0 258 76.0
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 2.7e-108 396.0 315 66.0
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 1.1e-104 384.0 295 69.2
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 2.4e-104 382.9 286 71.7
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 4.1e-104 382.1 272 70.2
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 2.9e-102 375.9 300 66.7
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 5.0e-102 375.2 228 80.7
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 1.0e-99 367.5 237 76.4
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 1.0e-99 367.5 231 78.8
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 6.8e-99 364.8 319 61.8
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 1.2e-98 364.0 235 74.9
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 2.0e-98 363.2 289 64.0
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 4.5e-95 352.1 277 65.0
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 7.7e-95 351.3 287 63.1
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 6.1e-92 341.7 207 81.6
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 8.0e-92 341.3 316 57.9
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 1.2e-90 337.4 298 60.1
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 1.3e-86 323.9 266 60.5
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 9.5e-85 317.8 246 65.0
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 5.2e-83 312.0 273 61.5
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 1.8e-75 287.0 280 55.0
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 3.5e-63 246.1 223 63.7
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 2.1e-60 236.9 288 51.7
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 4.7e-60 235.7 239 54.8
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 2.2e-57 226.9 230 57.4
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 1.2e-55 221.1 165 72.1
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 1.2e-47 194.5 164 65.2
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 2.1e-39 167.2 104 71.2
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 8.7e-22 108.6 68 75.0
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 3.1e-19 100.1 91 58.2
BraA03t14643Z Brassica rapa HOM05D006891 ORTHO05D033303 7.7e-10 68.9 64 64.1
Eucgr.G02044 Eucalyptus grandis HOM05D006891 ORTHO05D008671 3.8e-09 66.6 41 73.2
Ca_29372_v3 Cicer arietinum L. HOM05D004373 ORTHO05D005203 1.0e-06 58.5 125 31.2
C07p53990 Brassica napus HOM05D050604 ORTHO05D033303 3.9e-06 56.6 63 55.6
BolC7t45888H Brassica oleracea HOM05D050604 ORTHO05D033303 3.9e-06 56.6 63 55.6


User provided reference genes

Program Settings