Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR229750 Cardamine hirsuta HOM05D000236 ORTHO05D000192 2.6e-71 271.9 139 100.0
BraA03t14442Z Brassica rapa HOM05D000236 ORTHO05D000192 4.1e-32 141.7 142 59.2
A03p53760 Brassica napus HOM05D000236 ORTHO05D000192 1.6e-31 139.8 142 58.5
A01p14040 Brassica napus HOM05D000236 ORTHO05D000192 2.7e-31 139.0 140 54.3
BcaNung01032 Brassica carinata HOM05D000236 ORTHO05D000192 3.9e-30 135.2 139 51.8
Thhalv10025675m.g Eutrema salsugineum HOM05D000236 ORTHO05D000192 3.9e-30 135.2 145 55.9
AT4G22770 Arabidopsis thaliana HOM05D000236 ORTHO05D000192 5.1e-30 134.8 142 56.3
BraA01t01352Z Brassica rapa HOM05D000236 ORTHO05D000192 1.5e-29 133.3 140 52.9
AL7G30760 Arabidopsis lyrata HOM05D000236 ORTHO05D000192 1.1e-27 127.1 140 52.9
BolC1t01658H Brassica oleracea HOM05D000236 ORTHO05D000192 5.2e-27 124.8 121 56.2
BcaNung01673 Brassica carinata HOM05D000236 ORTHO05D000192 6.8e-27 124.4 142 54.2
BcaNung02479 Brassica carinata HOM05D000236 ORTHO05D000192 6.8e-27 124.4 142 54.2
C07p52130 Brassica napus HOM05D000236 ORTHO05D000192 6.8e-27 124.4 142 54.2
C01p17200 Brassica napus HOM05D000236 ORTHO05D000192 8.9e-27 124.0 121 56.2
BcaC09g51081 Brassica carinata HOM05D000236 ORTHO05D000192 2.0e-26 122.9 121 56.2
BcaNung01672 Brassica carinata HOM05D000236 ORTHO05D000192 3.4e-26 122.1 148 50.7
BolC7t45706H Brassica oleracea HOM05D000236 ORTHO05D000192 4.9e-25 118.2 142 52.1
Sp7g20830 Schrenkiella parvula HOM05D000236 ORTHO05D000192 3.0e-22 109.0 140 48.6
THA.LOC104813002 Tarenaya hassleriana HOM05D000236 ORTHO05D000192 1.1e-21 107.1 147 47.6
THA.LOC104813959 Tarenaya hassleriana HOM05D000236 ORTHO05D000192 3.3e-21 105.5 145 49.0
Sp6g05420 Schrenkiella parvula HOM05D000236 ORTHO05D000192 4.3e-21 105.1 161 44.7
AT4G12080 Arabidopsis thaliana HOM05D000236 ORTHO05D000192 2.8e-20 102.4 159 44.7
BcaB01g01719 Brassica carinata HOM05D000236 ORTHO05D000192 3.6e-20 102.1 159 45.9
CARHR254150 Cardamine hirsuta HOM05D000236 ORTHO05D000192 6.2e-20 101.3 155 44.5
BcaB05g23767 Brassica carinata HOM05D000236 ORTHO05D000192 8.1e-20 100.9 158 45.6
THA.LOC104806988 Tarenaya hassleriana HOM05D000236 ORTHO05D000192 1.4e-19 100.1 139 50.4
AL6G46920 Arabidopsis lyrata HOM05D000236 ORTHO05D000192 8.9e-19 97.4 157 43.3
BcaC03g16312 Brassica carinata HOM05D000236 ORTHO05D000192 1.2e-18 97.1 159 43.4
BolC2t10146H Brassica oleracea HOM05D000236 ORTHO05D000192 1.2e-18 97.1 159 43.4
Carub.0007s1849 Capsella rubella HOM05D000236 ORTHO05D000192 1.5e-18 96.7 143 44.8
Thhalv10028768m.g Eutrema salsugineum HOM05D000236 ORTHO05D000192 1.5e-18 96.7 160 43.1
Aa31LG6G4840 Aethionema arabicum HOM05D000236 ORTHO05D000192 4.4e-18 95.1 150 44.7
Aa31LG9G10400 Aethionema arabicum HOM05D000236 ORTHO05D000192 9.9e-18 94.0 150 43.3
A02p25920 Brassica napus HOM05D000236 ORTHO05D000192 2.9e-17 92.4 159 42.1
BraA02t07587Z Brassica rapa HOM05D000236 ORTHO05D000192 3.8e-17 92.0 159 42.1
C02p41240 Brassica napus HOM05D000236 ORTHO05D000192 7.1e-16 87.8 158 41.8
Carub.0006s3120 Capsella rubella HOM05D000236 ORTHO05D000192 1.3e-14 83.6 159 40.9
COL.COLO4_23850 Corchorus olitorius HOM05D000236 ORTHO05D000192 3.4e-10 68.9 138 42.8
Duzib068G0799 Durio zibethinus HOM05D000236 ORTHO05D000192 5.4e-08 61.6 127 41.7
Dinv39066 Davidia involucrata HOM05D000236 ORTHO05D000192 1.6e-07 60.1 125 40.0
FvH4_5g00860 Fragaria vesca HOM05D000236 ORTHO05D000192 2.1e-07 59.7 128 38.3
Cpa.g.sc29.71 Carica papaya HOM05D000236 ORTHO05D000192 3.5e-07 58.9 147 37.4
FAN18G0580 Fragaria x ananassa HOM05D000236 ORTHO05D000192 4.6e-07 58.5 128 37.5
MD00G1083100 Malus domestica HOM05D000236 ORTHO05D000192 6.0e-07 58.2 124 38.7
Manes.02G032537 Manihot esculenta HOM05D000236 ORTHO05D000192 1.0e-06 57.4 138 34.1
TWI60G1381 Tripterygium wilfordii HOM05D000236 ORTHO05D000192 1.0e-06 57.4 130 35.4
arahy.Tifrunner.gnm1.ann1.Z4FMKE Arachis hypogaea HOM05D000236 ORTHO05D000192 1.3e-06 57.0 136 37.5
Eucgr.D01975 Eucalyptus grandis HOM05D000236 ORTHO05D000192 1.7e-06 56.6 131 35.9
EL10Ac5g12636 Beta vulgaris HOM05D000236 ORTHO05D000192 2.3e-06 56.2 113 38.1
RcHm_v2.0_Chr7g0201041 Rosa chinensis HOM05D000236 ORTHO05D000192 2.3e-06 56.2 125 36.8
Ciclev10021222m.g Citrus clementina HOM05D000236 ORTHO05D000192 3.0e-06 55.8 133 38.3
MD06G1063800 Malus domestica HOM05D000236 ORTHO05D000192 3.0e-06 55.8 129 38.8
Thecc.03G263500 Theobroma cacao HOM05D000236 ORTHO05D000192 3.0e-06 55.8 139 36.0
Hma1.2p1_0138F.1_g063010 Hydrangea macrophylla HOM05D000236 ORTHO05D000192 5.1e-06 55.1 124 36.3
CAN.G1394.38 Capsicum annuum HOM05D000236 ORTHO05D000192 6.6e-06 54.7 122 37.7
arahy.Tifrunner.gnm1.ann1.8MM6DT Arachis hypogaea HOM05D000236 ORTHO05D000192 8.7e-06 54.3 136 36.8


User provided reference genes

Program Settings