Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 8.8e-71 270.4 159 100.0
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 4.1e-60 235.0 161 82.0
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 5.9e-59 231.1 159 81.8
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 7.7e-59 230.7 159 81.1
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 1.3e-58 229.9 159 81.1
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 1.7e-58 229.6 159 81.1
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 2.3e-58 229.2 161 80.1
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 1.5e-57 226.5 159 79.9
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 1.9e-57 226.1 161 77.6
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 4.2e-57 224.9 161 85.1
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 4.2e-57 224.9 161 83.2
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 2.1e-56 222.6 161 83.2
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 1.3e-53 213.4 163 74.2
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 3.4e-46 188.7 158 66.5
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.1e-41 173.7 134 68.7
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 2.5e-41 172.6 151 63.6
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 1.7e-37 159.8 152 55.9
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 8.3e-37 157.5 137 60.6
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 2.4e-36 156.0 159 56.0
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 5.4e-36 154.8 159 56.0
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 1.6e-35 153.3 151 55.6
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 1.6e-35 153.3 128 60.2
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 1.6e-35 153.3 131 60.3
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 2.1e-35 152.9 128 60.2
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 2.7e-35 152.5 155 55.5
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 3.5e-35 152.1 147 57.8
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 3.5e-35 152.1 159 53.5
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 4.6e-35 151.8 150 58.0
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 4.6e-35 151.8 150 58.0
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 1.0e-34 150.6 158 53.8
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 1.3e-34 150.2 150 53.3
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 1.3e-34 150.2 152 55.9
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 3.0e-34 149.1 158 52.5
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 3.0e-34 149.1 146 56.2
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 3.9e-34 148.7 142 54.9
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 3.9e-34 148.7 151 55.0
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 3.9e-34 148.7 142 55.6
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 8.6e-34 147.5 142 54.9
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 8.6e-34 147.5 147 55.8
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 2.5e-33 146.0 153 51.6
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 2.5e-33 146.0 128 59.4
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 3.3e-33 145.6 136 55.9
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 3.3e-33 145.6 116 64.7
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 4.3e-33 145.2 131 58.0
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 9.5e-33 144.1 142 55.6
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 1.2e-32 143.7 153 51.6
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 1.2e-32 143.7 131 58.0
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 1.2e-32 143.7 132 55.3
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 1.6e-32 143.3 128 56.2
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 2.1e-32 142.9 125 60.8
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 2.1e-32 142.9 139 54.7
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 2.8e-32 142.5 128 58.6
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 2.8e-32 142.5 156 49.4
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 3.6e-32 142.1 129 57.4
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 3.6e-32 142.1 127 56.7
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 3.6e-32 142.1 127 56.7
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 6.2e-32 141.4 142 54.2
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 6.2e-32 141.4 158 50.0
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 6.2e-32 141.4 148 49.3
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 8.1e-32 141.0 150 48.7
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 8.1e-32 141.0 126 57.9
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 8.1e-32 141.0 110 65.5
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 1.1e-31 140.6 147 51.0
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 1.1e-31 140.6 147 52.4
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 1.4e-31 140.2 150 51.3
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 1.8e-31 139.8 142 52.8
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 2.3e-31 139.4 159 47.8
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 2.3e-31 139.4 125 56.8
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 2.3e-31 139.4 109 64.2
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 2.3e-31 139.4 150 48.0
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 3.1e-31 139.0 151 51.7
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 3.1e-31 139.0 150 47.3
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 3.1e-31 139.0 159 50.3
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 4.0e-31 138.7 147 51.0
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 6.8e-31 137.9 134 54.5
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 8.9e-31 137.5 150 52.7
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 8.9e-31 137.5 146 51.4
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 8.9e-31 137.5 162 51.2
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 8.9e-31 137.5 150 50.7
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 8.9e-31 137.5 134 53.7
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 1.2e-30 137.1 150 47.3
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 2.0e-30 136.3 157 49.0
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 2.0e-30 136.3 146 50.0
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 2.0e-30 136.3 146 50.0
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 2.6e-30 136.0 128 53.9
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 3.4e-30 135.6 142 50.7
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 3.4e-30 135.6 142 50.7
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 4.4e-30 135.2 150 50.0
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 5.8e-30 134.8 143 50.3
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 9.9e-30 134.0 125 56.8
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 2.2e-29 132.9 143 49.0
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 2.2e-29 132.9 139 50.4
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 3.7e-29 132.1 126 57.9
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 3.7e-29 132.1 147 49.0
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 4.9e-29 131.7 128 53.1
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 6.4e-29 131.3 139 52.5
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 6.4e-29 131.3 128 52.3
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 1.1e-28 130.6 138 50.0
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 3.2e-28 129.0 147 49.7
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 7.1e-28 127.9 122 54.1
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.6e-27 126.7 139 49.6
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 2.1e-27 126.3 136 50.0
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 4.6e-27 125.2 168 44.0
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 7.8e-27 124.4 153 47.1
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 3.0e-26 122.5 154 46.8
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 3.0e-26 122.5 159 42.8
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 5.1e-26 121.7 177 41.8
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 1.9e-25 119.8 138 47.8
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 2.5e-25 119.4 147 44.9
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 4.3e-25 118.6 154 46.1
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 9.6e-25 117.5 197 41.1
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 8.1e-24 114.4 104 56.7
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 9.9e-22 107.5 71 74.6
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 6.4e-21 104.8 71 71.8
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 4.2e-20 102.1 110 49.1
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 9.9e-14 80.9 116 39.7
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 1.1e-12 77.4 70 55.7
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 2.4e-12 76.3 157 31.8
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.2e-11 73.9 122 38.5
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 2.1e-11 73.2 139 36.7
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 5.1e-10 68.6 102 39.2
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 9.0e-07 57.8 67 40.3
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 9.0e-07 57.8 105 34.3


User provided reference genes

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