Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 7.8e-86 320.5 167 100.0
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 1.0e-61 240.4 167 77.2
Sp7g13370 Schrenkiella parvula HOM05D006473 ORTHO05D008108 1.8e-61 239.6 160 76.2
C06p16570 Brassica napus HOM05D006473 ORTHO05D008108 5.1e-61 238.0 167 76.6
BolC6t36859H Brassica oleracea HOM05D006473 ORTHO05D008108 5.1e-61 238.0 167 76.6
BcaC08g44251 Brassica carinata HOM05D006473 ORTHO05D008108 1.5e-60 236.5 167 76.0
A05p16970 Brassica napus HOM05D006473 ORTHO05D008108 1.5e-60 236.5 167 76.0
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 1.1e-58 230.3 164 80.5
BcaC07g37876 Brassica carinata HOM05D006473 ORTHO05D008108 1.1e-58 230.3 164 75.0
BolC8t48269H Brassica oleracea HOM05D006473 ORTHO05D008108 1.1e-58 230.3 164 75.0
A08p11670 Brassica napus HOM05D006473 ORTHO05D008108 1.4e-58 229.9 167 73.1
BraA08t33161Z Brassica rapa HOM05D006473 ORTHO05D008108 1.4e-58 229.9 167 73.1
Carub.0007s2685 Capsella rubella HOM05D006473 ORTHO05D008108 4.0e-58 228.4 168 73.2
BcaB02g07838 Brassica carinata HOM05D006473 ORTHO05D008108 1.2e-57 226.9 164 72.6
Thhalv10027487m.g Eutrema salsugineum HOM05D006473 ORTHO05D008108 2.0e-57 226.1 164 76.2
AL7G40560 Arabidopsis lyrata HOM05D006473 ORTHO05D008108 1.1e-55 220.3 172 75.6
BcaB04g18284 Brassica carinata HOM05D006473 ORTHO05D008108 2.8e-51 205.7 164 67.7
Aa31LG9G2250 Aethionema arabicum HOM05D006473 ORTHO05D008108 5.5e-47 191.4 175 62.9
THA.LOC104808506 Tarenaya hassleriana HOM05D006473 ORTHO05D008108 4.2e-39 165.2 180 53.9
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 5.3e-26 121.7 175 43.4
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 6.9e-26 121.3 175 45.1
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 1.2e-25 120.6 170 47.1
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 1.5e-25 120.2 164 48.8
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 2.0e-25 119.8 163 47.2
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 2.6e-25 119.4 158 46.2
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 7.7e-25 117.9 167 47.9
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 1.3e-24 117.1 175 42.3
QL07p025679 Quercus lobata HOM05D006473 ORTHO05D008108 1.3e-24 117.1 184 42.9
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 1.7e-24 116.7 160 44.4
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 8.5e-24 114.4 172 44.8
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 1.1e-23 114.0 172 44.8
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 1.1e-23 114.0 184 41.3
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 1.1e-23 114.0 153 47.1
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 1.9e-23 113.2 172 44.2
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 2.5e-23 112.8 165 46.7
Ciclev10012907m.g Citrus clementina HOM05D006473 ORTHO05D008108 5.5e-23 111.7 158 46.2
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 2.1e-22 109.8 184 40.2
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 2.1e-22 109.8 184 40.2
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 2.1e-22 109.8 157 45.9
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 2.7e-22 109.4 174 43.7
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 2.7e-22 109.4 157 45.2
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 4.7e-22 108.6 150 50.7
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 4.7e-22 108.6 169 41.4
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 1.0e-21 107.5 163 42.9
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 1.4e-21 107.1 167 45.5
QL10p019398 Quercus lobata HOM05D006473 ORTHO05D008108 1.1e-20 104.0 172 43.6
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 2.6e-20 102.8 180 38.9
Sabra16G0000300 Salix brachista HOM05D006473 ORTHO05D008108 2.6e-20 102.8 167 42.5
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 4.4e-20 102.1 163 44.2
QL07p026949 Quercus lobata HOM05D006473 ORTHO05D008108 4.4e-20 102.1 181 41.4
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 4.4e-20 102.1 168 41.1
PGR031G0759 Punica granatum HOM05D006473 ORTHO05D008108 5.7e-20 101.7 165 43.0
QL07p027003 Quercus lobata HOM05D006473 ORTHO05D008108 5.7e-20 101.7 181 40.9
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 9.7e-20 100.9 175 38.9
Eucgr.A00949 Eucalyptus grandis HOM05D006473 ORTHO05D008108 1.3e-19 100.5 159 45.9
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea HOM05D006473 ORTHO05D008108 1.7e-19 100.1 160 44.4
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea HOM05D006473 ORTHO05D008108 1.7e-19 100.1 164 43.9
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 1.7e-19 100.1 159 44.0
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 2.2e-19 99.8 168 41.1
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 2.2e-19 99.8 160 41.9
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 4.8e-19 98.6 179 38.0
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 6.3e-19 98.2 152 44.1
Lalb_Chr17g0337141 Lupinus albus HOM05D006473 ORTHO05D008108 1.1e-18 97.4 154 42.2
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 1.1e-18 97.4 169 40.2
Phvul.007G120134 Phaseolus vulgaris HOM05D006473 ORTHO05D008108 2.4e-18 96.3 163 39.9
VMungo0540G0033 Vigna mungo HOM05D006473 ORTHO05D008108 2.4e-18 96.3 154 44.8
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 7.0e-18 94.7 174 38.5
Haze_13545 Corylus avellana HOM05D006473 ORTHO05D008108 9.1e-18 94.4 131 46.6
Cpa.g.sc8.265 Carica papaya HOM05D006473 ORTHO05D008108 1.6e-17 93.6 169 39.6
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 1.6e-17 93.6 160 39.4
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 2.0e-17 93.2 155 40.0
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 2.6e-17 92.8 130 43.8
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 5.9e-17 91.7 138 44.9
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 1.7e-16 90.1 140 48.6
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 2.9e-16 89.4 148 41.2
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 3.8e-16 89.0 151 45.7
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 5.0e-16 88.6 138 41.3
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 1.9e-15 86.7 141 41.8
QL07p026979 Quercus lobata HOM05D006473 ORTHO05D008108 1.9e-15 86.7 65 67.7
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 2.5e-15 86.3 155 40.0
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 2.5e-15 86.3 149 37.6
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 5.5e-15 85.1 168 37.5
QL09p045725 Quercus lobata HOM05D006473 ORTHO05D008108 2.1e-14 83.2 65 64.6
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 8.0e-14 81.3 137 42.3
Cc00_g04870 Coffea canephora HOM05D006473 ORTHO05D008108 8.0e-14 81.3 152 38.8
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 8.0e-14 81.3 183 36.1
Ca_16320_v3 Cicer arietinum L. HOM05D006473 ORTHO05D008108 4.0e-13 79.0 141 39.7
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 8.8e-13 77.8 172 39.5
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 1.5e-12 77.0 127 38.6
vmacro08765 Vaccinium macrocarpon HOM05D006473 ORTHO05D008108 2.0e-12 76.6 160 37.5
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 2.6e-12 76.3 152 39.5
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 4.4e-12 75.5 155 34.2
QL04p064817 Quercus lobata HOM05D006473 ORTHO05D008108 5.7e-12 75.1 159 39.0
HPP92_016064 Vanilla planifolia HOM05D006473 ORTHO05D008108 7.5e-12 74.7 131 37.4
GSVIVG01015888001 Vitis vinifera HOM05D006473 ORTHO05D008108 7.5e-12 74.7 123 45.5
CDE05G3197 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 1.7e-11 73.6 141 39.0
Cpa.g.sc32.52 Carica papaya HOM05D006473 ORTHO05D008108 3.7e-11 72.4 168 35.7
HanXRQChr02g0035171 Helianthus annuus HOM05D006473 ORTHO05D008108 3.7e-11 72.4 168 39.9
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 1.1e-10 70.9 170 32.9
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 1.1e-10 70.9 170 32.9
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 1.1e-10 70.9 72 48.6
Hund04387 Selenicereus undatus HOM05D006473 ORTHO05D008108 1.8e-10 70.1 139 32.4
PSO675G8005 Papaver somniferum HOM05D006473 ORTHO05D008108 2.4e-10 69.7 145 35.9
DCAR_029496 Daucus carota HOM05D006473 ORTHO05D008108 3.1e-10 69.3 48 66.7
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 3.1e-10 69.3 49 61.2
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 7.0e-10 68.2 159 31.4
Actinidia32074 Actinidia chinensis HOM05D006473 ORTHO05D008108 5.9e-09 65.1 165 33.9
CDE11G0296 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 7.7e-09 64.7 44 63.6
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 1.3e-08 63.9 173 32.4
QL04p064939 Quercus lobata HOM05D006473 ORTHO05D008108 6.5e-08 61.6 155 37.4
Os04g0504200 Oryza sativa ssp. japonica HOM05D006473 ORTHO05D008108 8.5e-08 61.2 144 32.6
SGA_v2.0_scaffold49G18372 Striga asiatica HOM05D006473 ORTHO05D008108 8.5e-08 61.2 139 40.3
Zm00001eb078060 Zea mays HOM05D006473 ORTHO05D008108 1.1e-07 60.8 141 32.6
Rhsim12G0015400 Rhododendron simsii HOM05D006473 ORTHO05D008108 1.5e-07 60.5 135 34.1
unitig_62.g23243 Utricularia gibba HOM05D006473 ORTHO05D008108 5.5e-07 58.5 45 62.2
ATR0763G071 Amborella trichopoda HOM05D006473 ORTHO05D008108 2.7e-06 56.2 140 31.4
Oeu027256.1 Olea europaea HOM05D006473 ORTHO05D008108 3.6e-06 55.8 30 80.0
QL05p058452 Quercus lobata HOM05D000045 ORTHO05D000611 4.7e-06 55.5 55 52.7


User provided reference genes

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