Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR218410 Cardamine hirsuta HOM05D042094 ORTHO05D033656 1.5e-29 132.1 65 100.0
CARHR168870 Cardamine hirsuta HOM05D000521 ORTHO05D000384 2.6e-13 78.2 89 55.1
Sp5g04400 Schrenkiella parvula HOM05D000521 ORTHO05D000384 3.8e-12 74.3 88 53.4
AL5G40240 Arabidopsis lyrata HOM05D000521 ORTHO05D000384 6.5e-12 73.6 89 51.7
BcaC02g10010 Brassica carinata HOM05D000521 ORTHO05D000384 1.4e-11 72.4 88 53.4
A04p02560 Brassica napus HOM05D000521 ORTHO05D000384 1.4e-11 72.4 88 53.4
C04p33990 Brassica napus HOM05D000521 ORTHO05D000384 1.4e-11 72.4 88 53.4
BolC4t24966H Brassica oleracea HOM05D000521 ORTHO05D000384 1.4e-11 72.4 88 53.4
BraA04t15983Z Brassica rapa HOM05D000521 ORTHO05D000384 1.4e-11 72.4 88 53.4
AT3G58480 Arabidopsis thaliana HOM05D000521 ORTHO05D000384 1.9e-11 72.0 89 50.6
BcaB02g08261 Brassica carinata HOM05D000521 ORTHO05D000384 1.9e-11 72.0 88 52.3
Thhalv10005868m.g Eutrema salsugineum HOM05D000521 ORTHO05D000384 4.2e-11 70.9 89 51.7
Carub.0005s2522 Capsella rubella HOM05D000521 ORTHO05D000384 6.1e-10 67.0 89 51.7
Aa31LG10G13040 Aethionema arabicum HOM05D000521 ORTHO05D000384 7.9e-10 66.6 86 51.2
C07p40850 Brassica napus HOM05D042094 ORTHO05D033656 9.7e-08 59.7 51 64.7
BolC7t44610H Brassica oleracea HOM05D042094 ORTHO05D033656 9.7e-08 59.7 51 64.7
THA.LOC104802789 Tarenaya hassleriana HOM05D000521 ORTHO05D000384 6.3e-07 57.0 86 45.3


User provided reference genes

Program Settings