Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR217430 Cardamine hirsuta HOM05D001338 ORTHO05D001239 1.7e-28 128.6 64 100.0
CARHR184740 Cardamine hirsuta HOM05D001338 ORTHO05D001239 3.6e-23 110.9 60 86.7
AT3G29794 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 1.5e-21 105.5 60 86.7
Thhalv10001096m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 4.7e-15 84.0 59 69.5
Thhalv10016048m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 1.4e-14 82.4 59 67.8
AT3G29638 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 1.8e-14 82.0 64 60.9
CARHR289900 Cardamine hirsuta HOM05D001338 ORTHO05D001239 4.0e-14 80.9 54 66.7
Sp5g19890 Schrenkiella parvula HOM05D001338 ORTHO05D001239 5.2e-14 80.5 64 57.8
Thhalv10017956m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 6.8e-14 80.1 49 75.5
Sp6g08540 Schrenkiella parvula HOM05D001338 ORTHO05D001239 4.4e-13 77.4 63 58.7
BcaB06g28244 Brassica carinata HOM05D001338 ORTHO05D001239 1.7e-12 75.5 59 64.4
Sp4g06670 Schrenkiella parvula HOM05D001338 ORTHO05D001239 4.1e-11 70.9 50 64.0
CANSAT01G1407 Cannabis sativa HOM05D001338 ORTHO05D001239 2.7e-10 68.2 59 61.0
CANSAT11G2147 Cannabis sativa HOM05D001338 ORTHO05D001239 2.7e-10 68.2 59 61.0
CANSAT21G0346 Cannabis sativa HOM05D001338 ORTHO05D001239 2.7e-10 68.2 59 61.0
CANSAT80G1592 Cannabis sativa HOM05D001338 ORTHO05D001239 2.7e-10 68.2 59 61.0
CANSAT80G1687 Cannabis sativa HOM05D001338 ORTHO05D001239 2.7e-10 68.2 59 61.0
CARHR149350 Cardamine hirsuta HOM05D001338 ORTHO05D001239 2.7e-10 68.2 59 57.6
CANSAT35G0841 Cannabis sativa HOM05D001338 ORTHO05D001239 7.8e-10 66.6 59 59.3
CANSAT54G1040 Cannabis sativa HOM05D001338 ORTHO05D001239 1.3e-09 65.9 59 54.2
CANSAT54G1041 Cannabis sativa HOM05D001338 ORTHO05D001239 1.3e-09 65.9 59 54.2
AT4G10200 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 1.7e-09 65.5 50 62.0
Oeu046624.1 Olea europaea HOM05D001338 ORTHO05D001239 1.7e-09 65.5 60 55.0
CANSAT64G1081 Cannabis sativa HOM05D001338 ORTHO05D001239 3.0e-09 64.7 59 52.5
Oeu018627.1 Olea europaea HOM05D001338 ORTHO05D001239 8.6e-09 63.2 60 55.0
CANSAT21G1695 Cannabis sativa HOM05D001338 ORTHO05D001239 1.1e-08 62.8 59 55.9
CAN.G464.34 Capsicum annuum HOM05D001338 ORTHO05D001239 1.1e-08 62.8 59 50.8
Solyc11g061950.1 Solanum lycopersicum HOM05D001338 ORTHO05D001239 1.1e-08 62.8 60 53.3
Aqoxy7G02176 Aquilegia oxysepala HOM05D001338 ORTHO05D001239 2.5e-08 61.6 59 50.8
FvH4_4g14421 Fragaria vesca HOM05D001338 ORTHO05D001239 2.5e-08 61.6 59 49.2
CANSAT21G1775 Cannabis sativa HOM05D001338 ORTHO05D001239 3.3e-08 61.2 59 52.5
Thhalv10009558m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 3.3e-08 61.2 50 56.0
Thhalv10009736m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 3.3e-08 61.2 50 56.0
Glyma.18G183000 Glycine max HOM05D001338 ORTHO05D001239 3.3e-08 61.2 63 46.0
TWI74G0662 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 5.6e-08 60.5 59 49.2
FvH4_2g32571 Fragaria vesca HOM05D001338 ORTHO05D001239 7.3e-08 60.1 59 49.2
CANSAT64G0482 Cannabis sativa HOM05D001338 ORTHO05D001239 9.5e-08 59.7 57 57.9
Atru.chr1.2432 Acer truncatum HOM05D001338 ORTHO05D001239 1.2e-07 59.3 63 50.8
CAN.G80.8 Capsicum annuum HOM05D001338 ORTHO05D001239 1.2e-07 59.3 59 50.8
CANSAT56G4418 Cannabis sativa HOM05D001338 ORTHO05D001239 1.6e-07 58.9 56 58.9
Sp3g26320 Schrenkiella parvula HOM05D001338 ORTHO05D001239 1.6e-07 58.9 58 48.3
Oeu058818.1 Olea europaea HOM05D001338 ORTHO05D001239 3.6e-07 57.8 57 54.4
RcHm_v2.0_Chr1g0320361 Rosa chinensis HOM05D001338 ORTHO05D001239 3.6e-07 57.8 59 47.5
CSS0007608 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 4.7e-07 57.4 59 47.5
TPR.G34669 Trifolium pratense HOM05D001338 ORTHO05D001239 4.7e-07 57.4 59 47.5
TWI31G0800 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 6.2e-07 57.0 59 47.5
TWI31G1167 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 6.2e-07 57.0 59 47.5
TWI74G0957 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 6.2e-07 57.0 59 47.5
CARHR290850 Cardamine hirsuta HOM05D001338 ORTHO05D001239 8.1e-07 56.6 43 65.1
FvH4_7g07902 Fragaria vesca HOM05D001338 ORTHO05D001239 8.1e-07 56.6 59 47.5
PSO017G0847 Papaver somniferum HOM05D001338 ORTHO05D001239 1.8e-06 55.5 60 43.3
TWI18G1324 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.8e-06 55.5 59 45.8
Oeu019879.2 Olea europaea HOM05D001338 ORTHO05D001239 2.3e-06 55.1 59 49.2
PSO675G6439 Papaver somniferum HOM05D001338 ORTHO05D001239 4.0e-06 54.3 60 43.3
CANSAT80G1793 Cannabis sativa HOM05D001338 ORTHO05D001239 5.2e-06 53.9 58 51.7
Glyma.14G186200 Glycine max HOM05D001338 ORTHO05D001239 5.2e-06 53.9 59 47.5
Oeu064199.1 Olea europaea HOM05D001338 ORTHO05D001239 5.2e-06 53.9 59 49.2
Oeu028129.1 Olea europaea HOM05D001338 ORTHO05D001239 6.8e-06 53.5 59 49.2
PSO724G1235 Papaver somniferum HOM05D001338 ORTHO05D001239 6.8e-06 53.5 60 41.7
AUR62026124 Chenopodium quinoa HOM05D001338 ORTHO05D001239 8.9e-06 53.1 62 50.0
PSO063G4296 Papaver somniferum HOM05D001338 ORTHO05D001239 8.9e-06 53.1 59 47.5


User provided reference genes

Program Settings