Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR216830 Cardamine hirsuta HOM05D003731 ORTHO05D116188 2.7e-35 151.4 72 100.0
AL1G59450 Arabidopsis lyrata HOM05D003731 ORTHO05D004429 8.5e-13 76.6 50 74.0
Carub.0001s4041 Capsella rubella HOM05D003731 ORTHO05D004429 8.5e-13 76.6 47 78.7
AT1G51560 Arabidopsis thaliana HOM05D003731 ORTHO05D004429 3.2e-12 74.7 50 72.0
CARHR041710 Cardamine hirsuta HOM05D003731 ORTHO05D004429 3.2e-12 74.7 49 75.5
Sp1g38210 Schrenkiella parvula HOM05D003731 ORTHO05D004429 1.8e-10 68.9 50 68.0
Thhalv10011555m.g Eutrema salsugineum HOM05D003731 ORTHO05D004429 3.9e-10 67.8 50 64.0
Aa31LG10G3210 Aethionema arabicum HOM05D003731 ORTHO05D004429 6.7e-10 67.0 54 64.8
BraA05t20855Z Brassica rapa HOM05D003731 ORTHO05D004429 2.8e-08 61.6 43 72.1
A05p19510 Brassica napus HOM05D003731 ORTHO05D004429 4.8e-08 60.8 54 57.4
Potri.010G252300 Populus trichocarpa HOM05D003731 ORTHO05D004429 6.3e-08 60.5 62 56.5
Atru.chr1.2721 Acer truncatum HOM05D003731 ORTHO05D004429 8.2e-08 60.1 52 57.7
Gohir.D05G114600 Gossypium hirsutum HOM05D003731 ORTHO05D004429 8.2e-08 60.1 51 60.8
Gorai.009G118800 Gossypium raimondii HOM05D003731 ORTHO05D004429 8.2e-08 60.1 51 60.8
Cpa.g.sc461.2 Carica papaya HOM05D003731 ORTHO05D004429 1.4e-07 59.3 53 58.5
THA.LOC104817922 Tarenaya hassleriana HOM05D003731 ORTHO05D004429 1.4e-07 59.3 45 68.9
Ciclev10025825m.g Citrus clementina HOM05D003731 ORTHO05D004429 1.8e-07 58.9 53 56.6
BcaC08g43921 Brassica carinata HOM05D003731 ORTHO05D004429 2.4e-07 58.5 43 69.8
C06p13140 Brassica napus HOM05D003731 ORTHO05D004429 2.4e-07 58.5 43 69.8
BolC6t36470H Brassica oleracea HOM05D003731 ORTHO05D004429 2.4e-07 58.5 43 69.8
Gohir.A05G114300 Gossypium hirsutum HOM05D003731 ORTHO05D004429 2.4e-07 58.5 51 58.8
Sabra08G0003400 Salix brachista HOM05D003731 ORTHO05D004429 2.4e-07 58.5 56 58.9
BcaB02g11256 Brassica carinata HOM05D003731 ORTHO05D004429 3.1e-07 58.2 43 69.8
Potri.008G006400 Populus trichocarpa HOM05D003731 ORTHO05D004429 3.1e-07 58.2 46 63.0
COL.COLO4_31180 Corchorus olitorius HOM05D003731 ORTHO05D004429 4.1e-07 57.8 51 58.8
Sabra10G0196300 Salix brachista HOM05D003731 ORTHO05D004429 6.9e-07 57.0 46 60.9
Thecc.06G059900 Theobroma cacao HOM05D003731 ORTHO05D004429 6.9e-07 57.0 51 58.8
Duzib235G1293 Durio zibethinus HOM05D003731 ORTHO05D004429 1.2e-06 56.2 51 56.9
CARHR097000 Cardamine hirsuta HOM05D003731 ORTHO05D004429 1.5e-06 55.8 40 70.0
TWI12G0642 Tripterygium wilfordii HOM05D003731 ORTHO05D004429 1.5e-06 55.8 58 55.2
MSTRG.22505 Avicennia marina HOM05D003731 ORTHO05D004429 2.6e-06 55.1 58 60.3
Manes.16G046301 Manihot esculenta HOM05D003731 ORTHO05D004429 2.6e-06 55.1 51 60.8
GSVIVG01029573001 Vitis vinifera HOM05D003731 ORTHO05D004429 2.6e-06 55.1 51 56.9
Aa31LG8G7840 Aethionema arabicum HOM05D003731 ORTHO05D004429 4.5e-06 54.3 44 61.4
BcaB04g19144 Brassica carinata HOM05D003731 ORTHO05D004429 4.5e-06 54.3 49 59.2
Hma1.2p1_0517F.1_g170700 Hydrangea macrophylla HOM05D003731 ORTHO05D004429 7.7e-06 53.5 46 58.7
PGR102G1715 Punica granatum HOM05D003731 ORTHO05D004429 7.7e-06 53.5 47 55.3
THA.LOC104798773 Tarenaya hassleriana HOM05D003731 ORTHO05D004429 7.7e-06 53.5 39 69.2


User provided reference genes

Program Settings