Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR216440 Cardamine hirsuta HOM05D000004 ORTHO05D043477 5.7e-55 217.2 103 100.0
SHI39455 Sapria himalayana HOM05D000004 ORTHO05D000002 4.6e-20 101.3 93 53.8
SHI48578 Sapria himalayana HOM05D000004 ORTHO05D000002 6.6e-19 97.4 93 51.6
SHI49670 Sapria himalayana HOM05D000004 ORTHO05D000002 8.7e-19 97.1 93 51.6
SHI02826 Sapria himalayana HOM05D000004 ORTHO05D000002 1.3e-17 93.2 91 49.5
SHI33292 Sapria himalayana HOM05D000004 ORTHO05D000002 1.6e-17 92.8 91 49.5
SHI44218 Sapria himalayana HOM05D000004 ORTHO05D000002 3.8e-14 81.6 91 41.8
SHI35232 Sapria himalayana HOM05D000004 ORTHO05D000002 3.2e-13 78.6 91 40.7
SHI41518 Sapria himalayana HOM05D000004 ORTHO05D000002 7.1e-13 77.4 91 39.6
SHI45133 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-12 76.6 76 47.4
SHI48738 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-12 76.6 91 40.7
SHI51350 Sapria himalayana HOM05D000004 ORTHO05D000002 2.3e-11 72.4 64 56.2
CAN.G824.35 Capsicum annuum HOM05D000004 ORTHO05D000002 5.1e-11 71.2 87 40.2
CAN.G845.6 Capsicum annuum HOM05D000004 ORTHO05D000002 8.7e-11 70.5 87 40.2
Hma1.2p1_0085F.1_g044720 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.5e-10 69.7 93 43.0
ECA234G2197 Erigeron canadensis HOM05D000560 ORTHO05D000417 9.6e-10 67.0 60 56.7
SHI45087 Sapria himalayana HOM05D000004 ORTHO05D000002 1.3e-09 66.6 53 58.5
Actinidia39286 Actinidia chinensis HOM05D000004 ORTHO05D000002 2.1e-09 65.9 83 42.2
ECA248G2403 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.1e-09 65.9 87 43.7
ECA236G2858 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.8e-09 65.5 87 41.4
ECA247G0871 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.8e-09 65.5 87 43.7
Psat5g135120 Pisum sativum HOM05D000004 ORTHO05D011729 2.8e-09 65.5 76 42.1
ECA246G1059 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.6e-09 65.1 83 43.4
ECA233G2622 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.8e-09 64.7 91 40.7
ECA234G4361 Erigeron canadensis HOM05D000222 ORTHO05D000329 4.8e-09 64.7 87 41.4
SHI24713 Sapria himalayana HOM05D000004 ORTHO05D000002 4.8e-09 64.7 89 40.4
ECA232G2477 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.2e-09 64.3 59 54.2
Psat4g146400 Pisum sativum HOM05D003122 ORTHO05D000002 6.2e-09 64.3 55 58.2
SHI44756 Sapria himalayana HOM05D000004 ORTHO05D000002 6.2e-09 64.3 72 38.9
ECA232G2363 Erigeron canadensis HOM05D001542 ORTHO05D001416 8.1e-09 63.9 59 54.2
ECA238G2785 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.1e-09 63.9 59 55.9
Rhsim07G0103000 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.1e-08 63.5 54 59.3
Rhsim07G0125600 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.1e-08 63.5 54 55.6
ECA232G1905 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-08 63.2 88 38.6
ECA232G3463 Erigeron canadensis HOM05D000924 ORTHO05D001209 1.4e-08 63.2 82 47.6
SHI41738 Sapria himalayana HOM05D000004 ORTHO05D000002 1.8e-08 62.8 53 58.5
ECA234G1689 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.4e-08 62.4 59 54.2
Rhsim02G0149500 Rhododendron simsii HOM05D000004 ORTHO05D000002 2.4e-08 62.4 90 40.0
TPR.G15426 Trifolium pratense HOM05D000004 ORTHO05D000002 2.4e-08 62.4 61 49.2
MD14G1073200 Malus domestica HOM05D000004 ORTHO05D000002 3.1e-08 62.0 86 37.2
Rhsim13G0234900 Rhododendron simsii HOM05D000004 ORTHO05D000002 3.1e-08 62.0 90 41.1
ECA232G1662 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.0e-08 61.6 59 50.8
SHI01384 Sapria himalayana HOM05D000004 ORTHO05D000002 4.0e-08 61.6 53 54.7
Ah.13g069810 Amaranthus hybridus HOM05D000004 ORTHO05D000002 5.3e-08 61.2 65 50.8
Ca_05385_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 5.3e-08 61.2 90 38.9
ECA233G6229 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.3e-08 61.2 67 50.7
ECA247G0635 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.3e-08 61.2 59 50.8
Psat2g079960 Pisum sativum HOM05D000004 ORTHO05D000002 5.3e-08 61.2 93 38.7
SHI44499 Sapria himalayana HOM05D000004 ORTHO05D000002 5.3e-08 61.2 82 36.6
Ca_13623_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 6.9e-08 60.8 88 38.6
Ca_13628_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 6.9e-08 60.8 88 38.6
ECA236G1497 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.9e-08 60.8 54 55.6
ECA238G3964 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.9e-08 60.8 55 54.5
ECA247G2318 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.9e-08 60.8 57 54.4
Rhsim01G0051200 Rhododendron simsii HOM05D000004 ORTHO05D000002 6.9e-08 60.8 54 55.6
VMungo1215G1456 Vigna mungo HOM05D005165 ORTHO05D000002 9.0e-08 60.5 57 50.9
ECA233G4222 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.2e-07 60.1 59 50.8
ECA246G1944 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.2e-07 60.1 82 41.5
Rhsim09G0107500 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.2e-07 60.1 59 49.2
ECA246G0443 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.5e-07 59.7 84 42.9
SHI20497 Sapria himalayana HOM05D000004 ORTHO05D000002 1.5e-07 59.7 83 38.6
Ca_23730_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.0e-07 59.3 54 55.6
ECA233G2312 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.0e-07 59.3 81 43.2
ECA234G0535 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.0e-07 59.3 56 51.8
ECA248G2380 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.0e-07 59.3 59 52.5
HanXRQChr13g0411311 Helianthus annuus HOM05D000004 ORTHO05D000002 2.0e-07 59.3 82 42.7
Dinv02028 Davidia involucrata HOM05D000004 ORTHO05D000002 3.4e-07 58.5 87 39.1
ECA248G2938 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.4e-07 58.5 55 54.5
HanXRQChr01g0017871 Helianthus annuus HOM05D000004 ORTHO05D000002 3.4e-07 58.5 85 37.6
Psat3g172640 Pisum sativum HOM05D000028 ORTHO05D000390 3.4e-07 58.5 87 39.1
Sopen04g007300 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-07 58.5 54 51.9
ECA232G1984 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.5e-07 58.2 84 41.7
ECA234G1098 Erigeron canadensis HOM05D000004 ORTHO05D000001 4.5e-07 58.2 59 47.5
Psat5g069760 Pisum sativum HOM05D000004 ORTHO05D000002 4.5e-07 58.2 53 56.6
VMungo0647G2196 Vigna mungo HOM05D000004 ORTHO05D000002 4.5e-07 58.2 53 49.1
Ca_25300_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 5.8e-07 57.8 62 46.8
ClCG01G011960 Citrullus lanatus HOM05D000004 ORTHO05D000002 5.8e-07 57.8 87 32.2
MELO3C027823.2 Cucumis melo HOM05D000004 ORTHO05D000002 5.8e-07 57.8 87 35.6
ECA238G1046 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.8e-07 57.8 60 50.0
Psat1g047840 Pisum sativum HOM05D011284 ORTHO05D018089 5.8e-07 57.8 82 35.4
AUR62041120 Chenopodium quinoa HOM05D000004 ORTHO05D000002 7.6e-07 57.4 83 41.0
Ca_10095_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 7.6e-07 57.4 90 37.8
VMungo1080G0040 Vigna mungo HOM05D003438 ORTHO05D000002 7.6e-07 57.4 88 38.6
Ca_12309_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 9.9e-07 57.0 92 39.1
ECA232G3180 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.9e-07 57.0 53 47.2
ECA232G4751 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.9e-07 57.0 53 47.2
ECA240G0488 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.9e-07 57.0 83 37.3
Hma1.2p1_0261F.1_g104790 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 9.9e-07 57.0 55 56.4
Lalb_Chr18g0058611 Lupinus albus HOM05D000004 ORTHO05D000002 9.9e-07 57.0 54 51.9
PSO063G2816 Papaver somniferum HOM05D000004 ORTHO05D000002 9.9e-07 57.0 61 49.2
AUR62004749 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.3e-06 56.6 54 55.6
PSO063G4877 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-06 56.6 55 49.1
Psat5g155160 Pisum sativum HOM05D000004 ORTHO05D000002 1.3e-06 56.6 84 39.3
Rhsim01G0082100 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.7e-06 56.2 54 48.1
SHI02921 Sapria himalayana HOM05D000004 ORTHO05D000002 1.7e-06 56.2 52 50.0
Psat2g135440 Pisum sativum HOM05D000004 ORTHO05D000002 2.2e-06 55.8 53 56.6
Psat3g182320 Pisum sativum HOM05D000004 ORTHO05D000002 2.2e-06 55.8 57 50.9
SHI29615 Sapria himalayana HOM05D000004 ORTHO05D000002 2.2e-06 55.8 87 33.3
SHI44582 Sapria himalayana HOM05D000004 ORTHO05D000002 2.2e-06 55.8 83 36.1
Ca_13854_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.9e-06 55.5 62 45.2
ECA232G0632 Erigeron canadensis HOM05D003187 ORTHO05D003630 2.9e-06 55.5 53 45.3
ECA234G4714 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.9e-06 55.5 66 45.5
Psat3g083840 Pisum sativum HOM05D000004 ORTHO05D000002 2.9e-06 55.5 81 39.5
Psat7g007480 Pisum sativum HOM05D000004 ORTHO05D000002 2.9e-06 55.5 82 39.0
Rhsim01G0083100 Rhododendron simsii HOM05D000004 ORTHO05D000002 2.9e-06 55.5 54 46.3
Sopen04g022550 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-06 55.5 54 51.9
CANSAT35G0278 Cannabis sativa HOM05D000004 ORTHO05D000002 3.8e-06 55.1 81 38.3
ECA248G0900 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.8e-06 55.1 59 49.2
Psat6g000480 Pisum sativum HOM05D000004 ORTHO05D000002 3.8e-06 55.1 53 54.7
QL01p053992 Quercus lobata HOM05D000004 ORTHO05D000002 3.8e-06 55.1 65 46.2
QL04p085052 Quercus lobata HOM05D000004 ORTHO05D000002 3.8e-06 55.1 65 46.2
QL08p043961 Quercus lobata HOM05D000004 ORTHO05D000002 3.8e-06 55.1 65 46.2
QL10p040115 Quercus lobata HOM05D000004 ORTHO05D000002 3.8e-06 55.1 61 50.8
RcHm_v2.0_Chr3g0473251 Rosa chinensis HOM05D000004 ORTHO05D000002 3.8e-06 55.1 83 39.8
ClCG04G005750 Citrullus lanatus HOM05D065357 ORTHO05D000002 4.9e-06 54.7 53 47.2
Psat1g202520 Pisum sativum HOM05D000004 ORTHO05D000002 4.9e-06 54.7 61 45.9
QL02p059512 Quercus lobata HOM05D000004 ORTHO05D000002 4.9e-06 54.7 53 52.8
Ca_12307_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 6.4e-06 54.3 54 50.0
ECA233G0770 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.4e-06 54.3 99 34.3
Hma1.2p1_0849F.1_g227950 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 6.4e-06 54.3 55 50.9
Lj4C85T15 Lonicera japonica HOM05D000004 ORTHO05D000002 6.4e-06 54.3 54 50.0
Psat5g274400 Pisum sativum HOM05D000004 ORTHO05D000002 6.4e-06 54.3 53 54.7
SHI10882 Sapria himalayana HOM05D000004 ORTHO05D000002 6.4e-06 54.3 67 35.8
SHI24940 Sapria himalayana HOM05D000030 ORTHO05D000009 6.4e-06 54.3 54 44.4
SHI49581 Sapria himalayana HOM05D000004 ORTHO05D000002 6.4e-06 54.3 91 33.0
BolC2t10664H Brassica oleracea HOM05D000005 ORTHO05D012152 8.4e-06 53.9 55 49.1
ECA247G2578 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.4e-06 53.9 53 49.1
PSO384G4983 Papaver somniferum HOM05D000004 ORTHO05D000002 8.4e-06 53.9 60 48.3
SHI06466 Sapria himalayana HOM05D000002 ORTHO05D000001 8.4e-06 53.9 54 44.4
TWI60G0240 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 8.4e-06 53.9 54 50.0


User provided reference genes

Program Settings