Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR215650 Cardamine hirsuta HOM05D007773 ORTHO05D010097 0.0e+00 1096.3 580 100.0
CARHR215640 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.5e-213 746.5 567 69.3
CARHR215620 Cardamine hirsuta HOM05D007773 ORTHO05D010097 3.4e-197 692.2 553 68.7
CARHR215200 Cardamine hirsuta HOM05D007773 ORTHO05D010097 4.5e-197 691.8 608 62.5
Carub.0007s3255 Capsella rubella HOM05D007773 ORTHO05D010097 1.4e-190 670.2 594 62.3
Carub.0007s3702 Capsella rubella HOM05D007773 ORTHO05D010097 7.9e-186 654.4 592 60.3
AT5G37920 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 3.3e-184 649.0 593 60.0
CARHR215610 Cardamine hirsuta HOM05D007773 ORTHO05D010097 9.1e-182 641.0 603 57.4
AT4G16530 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 4.2e-179 632.1 559 62.4
CARHR215560 Cardamine hirsuta HOM05D007773 ORTHO05D010097 4.7e-178 628.6 556 61.0
AL7G46050 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 6.1e-178 628.2 598 58.0
AT5G37410 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 7.9e-178 627.9 593 58.2
AL7G46040 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 2.6e-176 622.9 596 58.6
AT5G37470 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 3.3e-176 622.5 610 57.4
Carub.0007s3260 Capsella rubella HOM05D007773 ORTHO05D010097 3.0e-169 599.4 570 56.8
CARHR215570 Cardamine hirsuta HOM05D007773 ORTHO05D010097 4.4e-168 595.5 599 55.6
AL7G46150 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 2.2e-164 583.2 602 55.5
AT5G37460 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 5.0e-164 582.0 607 53.9
AL7G46160 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.5e-163 580.5 568 56.7
Carub.0007s3254 Capsella rubella HOM05D007773 ORTHO05D010097 3.2e-163 579.3 595 56.6
Carub.0007s3259 Capsella rubella HOM05D007773 ORTHO05D010097 4.7e-162 575.5 617 52.8
AT5G37430 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.7e-157 559.7 590 54.4
Thhalv10027695m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 7.2e-155 551.6 598 53.2
Thhalv10027691m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 4.1e-150 535.8 589 52.1
Sp7g04910 Schrenkiella parvula HOM05D007773 ORTHO05D010097 2.5e-147 526.6 569 52.0
Sp7g04850 Schrenkiella parvula HOM05D007773 ORTHO05D010097 2.0e-144 516.9 598 51.2
AL7G46410 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 4.1e-142 509.2 616 47.9
Aa31sc146G30 Aethionema arabicum HOM05D007773 ORTHO05D010097 2.0e-141 506.9 558 49.5
AT5G37420 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 8.6e-140 501.5 598 50.5
CARHR215670 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.9e-139 500.4 569 50.1
CARHR215220 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.0e-137 494.6 610 48.0
BcaB02g07854 Brassica carinata HOM05D007773 ORTHO05D010097 3.4e-136 489.6 601 48.6
BolC3t19574H Brassica oleracea HOM05D007773 ORTHO05D010097 7.5e-136 488.4 599 47.2
BcaC02g09567 Brassica carinata HOM05D007773 ORTHO05D010097 1.3e-135 487.6 556 50.4
C04p44210 Brassica napus HOM05D007773 ORTHO05D010097 1.3e-135 487.6 556 50.4
A08p00180 Brassica napus HOM05D007773 ORTHO05D010097 2.9e-135 486.5 576 49.8
BolC4t25995H Brassica oleracea HOM05D007773 ORTHO05D010097 4.9e-135 485.7 556 50.0
C04p44190 Brassica napus HOM05D007773 ORTHO05D010097 2.4e-134 483.4 597 48.1
A04p10560 Brassica napus HOM05D007773 ORTHO05D010097 4.1e-134 482.6 592 47.0
BraA08t34655Z Brassica rapa HOM05D007773 ORTHO05D010097 4.1e-134 482.6 599 47.1
AT5G37650 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 7.0e-134 481.9 604 46.5
A08p27100 Brassica napus HOM05D007773 ORTHO05D010097 1.2e-133 481.1 599 46.9
BNapus_Darmor_BZH_scaffold_38p00830 Brassica napus HOM05D007773 ORTHO05D010097 1.2e-133 481.1 560 50.7
BraA02t05642Z Brassica rapa HOM05D007773 ORTHO05D010097 1.2e-133 481.1 560 50.7
BcaC02g09565 Brassica carinata HOM05D007773 ORTHO05D010097 1.6e-133 480.7 596 47.8
BraA08t32075Z Brassica rapa HOM05D007773 ORTHO05D010097 7.8e-133 478.4 576 49.1
C03p72760 Brassica napus HOM05D007773 ORTHO05D010097 1.7e-132 477.2 599 46.7
BcaB06g27065 Brassica carinata HOM05D007773 ORTHO05D010097 2.3e-132 476.9 559 47.9
BolC4t25994H Brassica oleracea HOM05D007773 ORTHO05D010097 2.3e-132 476.9 596 47.7
A04p10570 Brassica napus HOM05D007773 ORTHO05D010097 6.6e-132 475.3 556 48.4
BolC3t21630H Brassica oleracea HOM05D007773 ORTHO05D010097 2.8e-130 469.9 574 49.1
C03p93320 Brassica napus HOM05D007773 ORTHO05D010097 4.7e-130 469.2 575 48.9
Thhalv10001931m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 6.2e-130 468.8 606 45.2
BcaB06g27068 Brassica carinata HOM05D007773 ORTHO05D010097 1.4e-129 467.6 560 47.9
AL7G46030 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 4.9e-127 459.1 597 46.7
BcaB03g12081 Brassica carinata HOM05D007773 ORTHO05D010097 1.4e-126 457.6 605 44.8
BraA04t16721Z Brassica rapa HOM05D007773 ORTHO05D010097 7.1e-126 455.3 630 42.9
Aa31LG4G11940 Aethionema arabicum HOM05D007773 ORTHO05D010097 4.6e-125 452.6 556 45.9
Sp7g04470 Schrenkiella parvula HOM05D007773 ORTHO05D010097 1.5e-123 447.6 570 45.6
AT5G37400 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.6e-122 444.1 575 47.3
Thhalv10017892m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 6.2e-122 442.2 555 48.8
Carub.0007s3280 Capsella rubella HOM05D007773 ORTHO05D010097 1.8e-121 440.7 568 46.1
Thhalv10027424m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 6.0e-117 425.6 561 46.7
Sp4g15990 Schrenkiella parvula HOM05D007773 ORTHO05D010097 1.7e-116 424.1 562 46.1
Carub.0007s3252 Capsella rubella HOM05D007773 ORTHO05D010097 3.0e-116 423.3 577 43.7
BcaB05g24027 Brassica carinata HOM05D007773 ORTHO05D010097 1.8e-113 414.1 562 44.5
AL7G38360 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 5.2e-113 412.5 381 61.2
AL7G38390 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 5.2e-113 412.5 381 61.2
BcaC02g09561 Brassica carinata HOM05D007773 ORTHO05D010097 2.6e-80 303.9 410 44.4
BcaC01g01702 Brassica carinata HOM05D007773 ORTHO05D010097 6.7e-76 289.3 414 42.5
Sp7g01300 Schrenkiella parvula HOM05D007773 ORTHO05D010097 1.4e-70 271.6 295 51.9
THA.LOC104805981 Tarenaya hassleriana HOM05D007773 ORTHO05D010097 1.4e-70 271.6 590 33.6
BcaC02g09563 Brassica carinata HOM05D007773 ORTHO05D010097 7.2e-70 269.2 385 42.3
AT4G09440 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 8.8e-60 235.7 171 71.3
AL2G23630 Arabidopsis lyrata HOM05D007773 ORTHO05D018431 1.5e-35 155.2 233 39.5
AT1G66060 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 2.6e-35 154.5 237 39.2
AT1G66000 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 9.8e-35 152.5 237 38.4
CARHR057940 Cardamine hirsuta HOM05D007773 ORTHO05D018431 2.1e-29 134.8 217 37.8
BcaC04g23658 Brassica carinata HOM05D007773 ORTHO05D010097 2.3e-23 114.8 101 53.5
AT2G03010 Arabidopsis thaliana HOM05D007773 ORTHO05D008084 1.1e-22 112.5 167 40.7
THA.LOC104805640 Tarenaya hassleriana HOM05D012346 ORTHO05D014859 5.6e-22 110.2 299 30.4
THA.LOC104805980 Tarenaya hassleriana HOM05D002675 ORTHO05D003322 5.4e-17 93.6 134 42.5
THA.LOC104805644 Tarenaya hassleriana HOM05D007773 ORTHO05D018431 2.0e-16 91.7 118 45.8
BcaC02g09564 Brassica carinata HOM05D007773 ORTHO05D010097 6.0e-16 90.1 96 52.1
BcaC08g44269 Brassica carinata HOM05D000001 ORTHO05D000003 3.0e-15 87.8 95 52.6
AL2G23710 Arabidopsis lyrata HOM05D012346 ORTHO05D014859 3.3e-14 84.3 293 28.3
Sp5g21170 Schrenkiella parvula HOM05D012346 ORTHO05D014859 1.2e-13 82.4 310 29.0
AL2G23620 Arabidopsis lyrata HOM05D018003 ORTHO05D018431 2.1e-13 81.6 107 43.0
CARHR058090 Cardamine hirsuta HOM05D012346 ORTHO05D014859 2.8e-13 81.3 306 25.2
A07p33120 Brassica napus HOM05D012346 ORTHO05D014859 4.7e-13 80.5 312 27.9
BolC2t07141H Brassica oleracea HOM05D007773 ORTHO05D043183 6.2e-13 80.1 88 52.3
BcaB03g15294 Brassica carinata HOM05D012346 ORTHO05D014859 1.1e-12 79.3 306 28.1
Carub.0002s1208 Capsella rubella HOM05D012346 ORTHO05D014859 1.8e-12 78.6 300 27.3
BraA07t30940Z Brassica rapa HOM05D012346 ORTHO05D014859 4.0e-12 77.4 312 27.2
BcaC02g09562 Brassica carinata HOM05D007773 ORTHO05D010097 6.8e-12 76.6 85 50.6
BolC6t39031H Brassica oleracea HOM05D012346 ORTHO05D014859 8.9e-12 76.3 307 28.0
C06p39380 Brassica napus HOM05D012346 ORTHO05D014859 1.2e-11 75.9 307 28.3
THA.LOC104825402 Tarenaya hassleriana HOM05D007773 ORTHO05D018431 1.5e-11 75.5 102 45.1
BcaC08g46079 Brassica carinata HOM05D012346 ORTHO05D014859 2.6e-11 74.7 307 27.7
THA.LOC109116331 Tarenaya hassleriana HOM05D007773 ORTHO05D406984 1.3e-10 72.4 159 32.1
Thhalv10019694m.g Eutrema salsugineum HOM05D012346 ORTHO05D014859 2.2e-10 71.6 126 38.1
CARHR215680 Cardamine hirsuta HOM05D007773 ORTHO05D043183 6.0e-08 63.5 69 49.3


User provided reference genes

Program Settings