Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR215570 Cardamine hirsuta HOM05D007773 ORTHO05D010097 0.0e+00 1183.7 603 100.0
CARHR215610 Cardamine hirsuta HOM05D007773 ORTHO05D010097 4.5e-232 808.1 606 67.8
AT5G37470 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 4.3e-219 765.0 603 66.3
AL7G46160 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 4.0e-217 758.4 617 64.8
Carub.0007s3260 Capsella rubella HOM05D007773 ORTHO05D010097 4.0e-217 758.4 602 64.6
CARHR215560 Cardamine hirsuta HOM05D007773 ORTHO05D010097 3.2e-214 748.8 588 67.3
AT5G37460 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.6e-208 729.2 611 63.3
AL7G46150 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.1e-206 723.8 606 64.0
Carub.0007s3259 Capsella rubella HOM05D007773 ORTHO05D010097 2.5e-206 722.6 605 63.3
CARHR215200 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.0e-188 664.1 601 59.9
Thhalv10027691m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 9.4e-182 641.0 597 57.0
Sp7g04910 Schrenkiella parvula HOM05D007773 ORTHO05D010097 2.3e-180 636.3 593 58.5
Carub.0007s3255 Capsella rubella HOM05D007773 ORTHO05D010097 2.2e-178 629.8 605 58.0
CARHR215640 Cardamine hirsuta HOM05D007773 ORTHO05D010097 3.8e-175 619.0 600 58.7
Thhalv10027695m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 1.1e-174 617.5 601 57.1
AT5G37920 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.0e-171 606.7 603 55.9
CARHR215650 Cardamine hirsuta HOM05D007773 ORTHO05D010097 8.3e-170 601.3 599 55.6
AL7G46050 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 5.4e-169 598.6 610 56.4
AT5G37410 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 6.6e-167 591.7 606 55.3
AL7G46040 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 7.2e-166 588.2 607 55.4
A04p10560 Brassica napus HOM05D007773 ORTHO05D010097 2.1e-165 586.6 590 55.6
Carub.0007s3702 Capsella rubella HOM05D007773 ORTHO05D010097 2.8e-165 586.3 604 55.1
C04p44190 Brassica napus HOM05D007773 ORTHO05D010097 3.0e-164 582.8 595 55.3
BraA02t05642Z Brassica rapa HOM05D007773 ORTHO05D010097 8.9e-164 581.3 591 55.8
BcaB06g27065 Brassica carinata HOM05D007773 ORTHO05D010097 1.5e-163 580.5 588 54.4
BcaC02g09565 Brassica carinata HOM05D007773 ORTHO05D010097 1.5e-163 580.5 595 55.3
BNapus_Darmor_BZH_scaffold_38p00830 Brassica napus HOM05D007773 ORTHO05D010097 2.6e-163 579.7 591 55.7
BolC4t25994H Brassica oleracea HOM05D007773 ORTHO05D010097 7.5e-163 578.2 592 55.2
BolC3t19574H Brassica oleracea HOM05D007773 ORTHO05D010097 5.0e-159 565.5 601 51.4
CARHR215670 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.5e-158 563.1 612 53.1
CARHR215620 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.1e-157 560.1 553 57.3
BraA08t34655Z Brassica rapa HOM05D007773 ORTHO05D010097 2.8e-157 559.7 601 51.6
A04p10570 Brassica napus HOM05D007773 ORTHO05D010097 8.0e-157 558.1 585 52.6
A08p27100 Brassica napus HOM05D007773 ORTHO05D010097 8.0e-157 558.1 601 51.4
BraA04t16721Z Brassica rapa HOM05D007773 ORTHO05D010097 1.0e-156 557.8 660 48.2
Carub.0007s3254 Capsella rubella HOM05D007773 ORTHO05D010097 4.0e-156 555.8 593 55.8
BcaC02g09567 Brassica carinata HOM05D007773 ORTHO05D010097 6.8e-156 555.1 589 52.3
C04p44210 Brassica napus HOM05D007773 ORTHO05D010097 6.8e-156 555.1 589 52.3
C03p72760 Brassica napus HOM05D007773 ORTHO05D010097 1.2e-155 554.3 601 50.9
BcaB06g27068 Brassica carinata HOM05D007773 ORTHO05D010097 3.4e-155 552.7 584 53.1
AT4G16530 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 4.4e-155 552.4 575 55.8
BolC4t25995H Brassica oleracea HOM05D007773 ORTHO05D010097 9.8e-155 551.2 589 52.0
CARHR215220 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.4e-153 547.4 610 48.9
Aa31sc146G30 Aethionema arabicum HOM05D007773 ORTHO05D010097 1.2e-152 544.3 593 50.9
AL7G46030 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 2.3e-151 540.0 629 49.3
AL7G46410 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 3.9e-151 539.3 603 48.4
Sp7g04850 Schrenkiella parvula HOM05D007773 ORTHO05D010097 3.6e-149 532.7 597 50.9
AT5G37430 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 5.8e-147 525.4 604 49.3
AT5G37400 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 4.9e-146 522.3 605 50.1
Thhalv10001931m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 4.9e-146 522.3 610 48.2
BcaB03g12081 Brassica carinata HOM05D007773 ORTHO05D010097 1.5e-142 510.8 604 48.0
BcaB02g07854 Brassica carinata HOM05D007773 ORTHO05D010097 4.3e-142 509.2 606 49.0
A08p00180 Brassica napus HOM05D007773 ORTHO05D010097 7.3e-142 508.4 611 49.3
BolC3t21630H Brassica oleracea HOM05D007773 ORTHO05D010097 2.1e-141 506.9 609 49.9
Sp7g04470 Schrenkiella parvula HOM05D007773 ORTHO05D010097 2.1e-141 506.9 609 48.8
C03p93320 Brassica napus HOM05D007773 ORTHO05D010097 3.6e-141 506.1 610 49.7
Carub.0007s3252 Capsella rubella HOM05D007773 ORTHO05D010097 2.3e-140 503.4 618 47.2
BraA08t32075Z Brassica rapa HOM05D007773 ORTHO05D010097 5.8e-139 498.8 611 48.6
AT5G37650 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.7e-138 497.3 599 47.6
Aa31LG4G11940 Aethionema arabicum HOM05D007773 ORTHO05D010097 1.4e-137 494.2 604 46.7
AT5G37420 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.1e-129 468.0 606 48.7
Carub.0007s3280 Capsella rubella HOM05D007773 ORTHO05D010097 9.3e-129 464.9 601 45.3
Thhalv10017892m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 1.6e-128 464.2 584 47.3
Sp4g15990 Schrenkiella parvula HOM05D007773 ORTHO05D010097 1.1e-126 458.0 589 46.7
BcaB05g24027 Brassica carinata HOM05D007773 ORTHO05D010097 6.2e-125 452.2 583 47.5
Thhalv10027424m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 5.8e-123 445.7 592 46.5
AL7G38360 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.3e-109 401.4 375 60.3
AL7G38390 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.3e-109 401.4 375 60.3
BcaC02g09561 Brassica carinata HOM05D007773 ORTHO05D010097 7.9e-104 382.1 409 53.3
BcaC02g09563 Brassica carinata HOM05D007773 ORTHO05D010097 5.1e-95 352.8 383 52.2
BcaC01g01702 Brassica carinata HOM05D007773 ORTHO05D010097 3.6e-88 330.1 414 45.9
THA.LOC104805981 Tarenaya hassleriana HOM05D007773 ORTHO05D010097 1.6e-80 304.7 623 34.2
Sp7g01300 Schrenkiella parvula HOM05D007773 ORTHO05D010097 7.9e-80 302.4 302 54.3
AT4G09440 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.8e-53 214.2 173 64.7
AT1G66060 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 3.7e-37 160.6 281 35.6
AT1G66000 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 1.2e-35 155.6 281 34.9
AL2G23630 Arabidopsis lyrata HOM05D007773 ORTHO05D018431 2.1e-32 144.8 239 38.9
CARHR057940 Cardamine hirsuta HOM05D007773 ORTHO05D018431 5.8e-30 136.7 218 36.2
THA.LOC104805640 Tarenaya hassleriana HOM05D012346 ORTHO05D014859 6.0e-27 126.7 306 31.0
BcaC04g23658 Brassica carinata HOM05D007773 ORTHO05D010097 8.6e-26 122.9 102 58.8
BcaC02g09564 Brassica carinata HOM05D007773 ORTHO05D010097 2.3e-23 114.8 81 69.1
THA.LOC104805980 Tarenaya hassleriana HOM05D002675 ORTHO05D003322 1.2e-22 112.5 165 38.2
BcaC08g44269 Brassica carinata HOM05D000001 ORTHO05D000003 4.4e-22 110.5 81 70.4
THA.LOC104805644 Tarenaya hassleriana HOM05D007773 ORTHO05D018431 5.8e-22 110.2 149 40.3
BcaC02g09562 Brassica carinata HOM05D007773 ORTHO05D010097 2.2e-21 108.2 76 69.7
A07p33120 Brassica napus HOM05D012346 ORTHO05D014859 6.8e-15 86.7 309 27.8
CARHR215680 Cardamine hirsuta HOM05D007773 ORTHO05D043183 5.8e-14 83.6 80 61.2
BolC2t07141H Brassica oleracea HOM05D007773 ORTHO05D043183 7.6e-14 83.2 98 51.0
Sp5g21170 Schrenkiella parvula HOM05D012346 ORTHO05D014859 3.8e-13 80.9 308 25.6
THA.LOC104825402 Tarenaya hassleriana HOM05D007773 ORTHO05D018431 1.9e-12 78.6 103 42.7
Cfa007774 Carpinus fangiana HOM05D000846 ORTHO05D001340 4.2e-12 77.4 432 23.8
AT2G03010 Arabidopsis thaliana HOM05D007773 ORTHO05D008084 9.3e-12 76.3 162 32.1
AL2G23620 Arabidopsis lyrata HOM05D018003 ORTHO05D018431 1.6e-11 75.5 147 36.7
THA.LOC109116331 Tarenaya hassleriana HOM05D007773 ORTHO05D406984 1.9e-09 68.6 159 29.6
Thhalv10019694m.g Eutrema salsugineum HOM05D012346 ORTHO05D014859 3.3e-09 67.8 125 35.2


User provided reference genes

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