Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR215520 Cardamine hirsuta HOM05D004487 ORTHO05D005483 3.0e-115 418.7 237 100.0
AL7G11780 Arabidopsis lyrata HOM05D004487 ORTHO05D005483 4.6e-92 341.7 237 80.6
Thhalv10027902m.g Eutrema salsugineum HOM05D004487 ORTHO05D005483 5.3e-88 328.2 242 75.2
Sp7g04740 Schrenkiella parvula HOM05D004487 ORTHO05D005483 9.1e-88 327.4 238 77.3
Aa31LG6G15640 Aethionema arabicum HOM05D004487 ORTHO05D005483 1.0e-86 323.9 236 70.8
Carub.0007s0150 Capsella rubella HOM05D004487 ORTHO05D005483 1.3e-81 307.0 238 73.1
AT4G39630 Arabidopsis thaliana HOM05D004487 ORTHO05D005483 2.9e-78 295.8 237 73.8
BcaC02g09572 Brassica carinata HOM05D004487 ORTHO05D005483 6.3e-73 278.1 237 67.5
CARHR247100 Cardamine hirsuta HOM05D004487 ORTHO05D005483 1.8e-72 276.6 238 75.2
C04p44290 Brassica napus HOM05D004487 ORTHO05D005483 4.1e-72 275.4 232 67.7
A04p10610 Brassica napus HOM05D004487 ORTHO05D005483 2.6e-71 272.7 232 67.2
BolC4t26003H Brassica oleracea HOM05D004487 ORTHO05D005483 7.7e-71 271.2 242 64.9
THA.LOC104807718 Tarenaya hassleriana HOM05D004487 ORTHO05D005483 6.5e-70 268.1 240 64.2
BcaB06g27071 Brassica carinata HOM05D004487 ORTHO05D005483 1.5e-66 256.9 233 68.7
BraA04t16724Z Brassica rapa HOM05D004487 ORTHO05D005483 2.0e-66 256.5 242 63.2
Sp7g36260 Schrenkiella parvula HOM05D004487 ORTHO05D005483 7.7e-55 218.0 232 62.5
Thecc.01G110300 Theobroma cacao HOM05D004487 ORTHO05D005483 2.9e-54 216.1 237 50.6
Duzib147G1438 Durio zibethinus HOM05D004487 ORTHO05D005483 8.9e-51 204.5 234 49.6
Ciclev10026392m.g Citrus clementina HOM05D004487 ORTHO05D005483 7.5e-50 201.4 234 47.9
Gohir.D11G056800 Gossypium hirsutum HOM05D004487 ORTHO05D005483 7.5e-50 201.4 240 47.9
Atru.chr3.204 Acer truncatum HOM05D004487 ORTHO05D005483 2.8e-49 199.5 200 52.5
TWI74G0090 Tripterygium wilfordii HOM05D004487 ORTHO05D005483 2.8e-49 199.5 237 48.1
Gohir.A11G053300 Gossypium hirsutum HOM05D004487 ORTHO05D005483 4.9e-49 198.7 240 47.9
Gorai.007G062000 Gossypium raimondii HOM05D004487 ORTHO05D005483 4.9e-49 198.7 240 47.5
COL.COLO4_11036 Corchorus olitorius HOM05D004487 ORTHO05D005483 1.8e-48 196.8 234 46.2
CiPaw.04G093900 Carya illinoinensis HOM05D004487 ORTHO05D005483 3.9e-46 189.1 238 48.3
Potri.007G085100 Populus trichocarpa HOM05D004487 ORTHO05D005483 5.0e-46 188.7 241 48.1
TAR625G1215 Trochodendron aralioides HOM05D004487 ORTHO05D005483 1.1e-45 187.6 237 45.6
QL06p033465 Quercus lobata HOM05D004487 ORTHO05D005483 1.5e-45 187.2 235 47.2
Nn8g40276 Nelumbo nucifera HOM05D004487 ORTHO05D005483 3.3e-45 186.0 199 50.3
Haze_05964 Corylus avellana HOM05D004487 ORTHO05D005483 1.0e-43 181.0 263 43.7
Sabra07G0070400 Salix brachista HOM05D004487 ORTHO05D005483 1.0e-43 181.0 239 46.9
CsaV3_6G045820 Cucumis sativus L. HOM05D004487 ORTHO05D005483 4.0e-43 179.1 235 45.5
Manes.12G140400 Manihot esculenta HOM05D004487 ORTHO05D005483 4.0e-43 179.1 238 47.5
GSVIVG01022203001 Vitis vinifera HOM05D004487 ORTHO05D005483 4.0e-43 179.1 238 45.0
ClCG01G019130 Citrullus lanatus HOM05D004487 ORTHO05D005483 1.2e-42 177.6 234 44.0
MELO3C007790.2 Cucumis melo HOM05D004487 ORTHO05D005483 1.2e-42 177.6 235 45.5
Migut.H01422 Erythranthe guttata HOM05D004487 ORTHO05D005483 1.2e-42 177.6 235 44.7
CsaV3_5G036000 Cucumis sativus L. HOM05D004487 ORTHO05D005483 2.0e-42 176.8 240 44.2
MD01G1016500 Malus domestica HOM05D004487 ORTHO05D005483 2.0e-42 176.8 238 44.5
RcHm_v2.0_Chr2g0115971 Rosa chinensis HOM05D004487 ORTHO05D005483 2.6e-42 176.4 234 44.9
Nn2g14563 Nelumbo nucifera HOM05D004487 ORTHO05D005483 9.8e-42 174.5 233 43.8
Rhsim05G0180000 Rhododendron simsii HOM05D004487 ORTHO05D005483 1.3e-41 174.1 231 42.0
Gohir.1Z049552 Gossypium hirsutum HOM05D004487 ORTHO05D005483 1.7e-41 173.7 168 52.4
Lalb_Chr11g0075201 Lupinus albus HOM05D004487 ORTHO05D005483 6.4e-41 171.8 234 45.3
PGR004G1100 Punica granatum HOM05D004487 ORTHO05D005483 1.4e-40 170.6 228 43.4
Lj3g0008934 Lotus japonicus HOM05D004487 ORTHO05D005483 2.4e-40 169.9 234 46.2
Cc02_g15410 Coffea canephora HOM05D004487 ORTHO05D005483 3.2e-40 169.5 237 42.6
vmacro21317 Vaccinium macrocarpon HOM05D004487 ORTHO05D005483 3.2e-40 169.5 233 42.9
MSTRG.14740 Avicennia marina HOM05D004487 ORTHO05D005483 4.1e-40 169.1 236 41.9
MD15G1334800 Malus domestica HOM05D004487 ORTHO05D005483 4.1e-40 169.1 238 43.3
EL10Ac4g09863 Beta vulgaris HOM05D004487 ORTHO05D005483 7.0e-40 168.3 225 43.6
HanXRQChr14g0458831 Helianthus annuus HOM05D004487 ORTHO05D005483 1.2e-39 167.5 235 42.6
Oeu040918.3 Olea europaea HOM05D004487 ORTHO05D005483 1.2e-39 167.5 286 37.8
AUR62005250 Chenopodium quinoa HOM05D004487 ORTHO05D005483 2.0e-39 166.8 196 44.4
AUR62000713 Chenopodium quinoa HOM05D004487 ORTHO05D005483 2.7e-39 166.4 197 44.7
FvH4_1g21950 Fragaria vesca HOM05D004487 ORTHO05D005483 2.7e-39 166.4 236 42.8
Prupe.8G078400 Prunus persica HOM05D004487 ORTHO05D005483 2.7e-39 166.4 201 46.8
ECA238G1615 Erigeron canadensis HOM05D004487 ORTHO05D005483 3.5e-39 166.0 234 42.3
vmacro18624 Vaccinium macrocarpon HOM05D004487 ORTHO05D005483 4.6e-39 165.6 235 41.7
Solyc03g019910.3 Solanum lycopersicum HOM05D004487 ORTHO05D005483 7.8e-39 164.9 238 43.7
Potri.005G082500 Populus trichocarpa HOM05D004487 ORTHO05D005483 1.3e-38 164.1 239 43.5
Sopen03g029710 Solanum pennellii HOM05D004487 ORTHO05D005483 1.3e-38 164.1 238 43.3
FAN19G1427 Fragaria x ananassa HOM05D004487 ORTHO05D005483 1.7e-38 163.7 236 41.9
FAN23G0375 Fragaria x ananassa HOM05D004487 ORTHO05D005483 1.7e-38 163.7 236 41.9
FvH4_1g25670 Fragaria vesca HOM05D004487 ORTHO05D005483 2.3e-38 163.3 234 42.7
CSS0025780 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 3.0e-38 162.9 236 42.8
Ca_23004_v3 Cicer arietinum L. HOM05D004487 ORTHO05D005483 3.9e-38 162.5 237 43.5
CAN.G861.28 Capsicum annuum HOM05D004487 ORTHO05D005483 5.0e-38 162.2 232 41.8
Nitab4.5_0001495g0020 Nicotiana tabacum HOM05D004487 ORTHO05D005483 6.6e-38 161.8 235 42.6
Nitab4.5_0007717g0020 Nicotiana tabacum HOM05D004487 ORTHO05D005483 6.6e-38 161.8 235 42.1
MELO3C012399.2 Cucumis melo HOM05D004487 ORTHO05D005483 3.3e-37 159.5 255 42.0
FAN19G3081 Fragaria x ananassa HOM05D004487 ORTHO05D005483 4.3e-37 159.1 236 41.5
Peaxi162Scf00171g00006 Petunia axillaris HOM05D004487 ORTHO05D005483 4.3e-37 159.1 238 41.6
CANSAT01G2370 Cannabis sativa HOM05D004487 ORTHO05D005483 5.6e-37 158.7 239 42.7
Prupe.6G176600 Prunus persica HOM05D004487 ORTHO05D005483 5.6e-37 158.7 238 42.4
ClCG05G021300 Citrullus lanatus HOM05D004487 ORTHO05D005483 7.3e-37 158.3 235 43.0
FAN26G2580 Fragaria x ananassa HOM05D004487 ORTHO05D005483 1.2e-36 157.5 239 40.6
arahy.Tifrunner.gnm1.ann1.Z7G166 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.6e-36 157.1 199 46.2
PGSC0003DMG400015213 Solanum tuberosum HOM05D004487 ORTHO05D005483 1.6e-36 157.1 235 42.1
FAN28G1272 Fragaria x ananassa HOM05D004487 ORTHO05D005483 2.1e-36 156.8 233 39.9
FAN28G1914 Fragaria x ananassa HOM05D004487 ORTHO05D005483 2.1e-36 156.8 233 39.9
Lsat_1_v5_gn_2_120680 Lactuca sativa HOM05D004487 ORTHO05D005483 2.8e-36 156.4 256 39.1
arahy.Tifrunner.gnm1.ann1.7417N6 Arachis hypogaea HOM05D004487 ORTHO05D005483 4.7e-36 155.6 200 52.0
Ca_25628_v3 Cicer arietinum L. HOM05D004487 ORTHO05D005483 4.7e-36 155.6 238 42.0
arahy.Tifrunner.gnm1.ann1.0Q3DRY Arachis hypogaea HOM05D004487 ORTHO05D005483 6.2e-36 155.2 199 45.7
arahy.Tifrunner.gnm1.ann1.NRP8RH Arachis hypogaea HOM05D004487 ORTHO05D005483 8.0e-36 154.8 200 46.0
Hma1.2p1_0486F.1_g163280 Hydrangea macrophylla HOM05D004487 ORTHO05D005483 1.4e-35 154.1 198 45.5
arahy.Tifrunner.gnm1.ann1.10QJ8K Arachis hypogaea HOM05D004487 ORTHO05D005483 1.8e-35 153.7 200 45.5
Glyma.15G199500 Glycine max HOM05D004487 ORTHO05D005483 1.5e-34 150.6 236 41.5
Nitab4.5_0000477g0120 Nicotiana tabacum HOM05D004487 ORTHO05D005483 1.5e-34 150.6 225 41.3
TPR.G33715 Trifolium pratense HOM05D004487 ORTHO05D005483 1.5e-34 150.6 240 40.4
Actinidia08329 Actinidia chinensis HOM05D004487 ORTHO05D005483 2.0e-34 150.2 150 47.3
DCAR_014253 Daucus carota HOM05D004487 ORTHO05D005483 2.6e-34 149.8 236 40.3
arahy.Tifrunner.gnm1.ann1.S1NDRU Arachis hypogaea HOM05D004487 ORTHO05D005483 3.4e-34 149.4 200 50.5
unitig_22.g6757 Utricularia gibba HOM05D004487 ORTHO05D005483 3.4e-34 149.4 232 41.8
Phvul.009G211400 Phaseolus vulgaris HOM05D004487 ORTHO05D005483 5.8e-34 148.7 206 43.2
MBI04_g31212_MAGBIO Magnolia biondii HOM05D004487 ORTHO05D005483 7.5e-34 148.3 226 38.5
Aqoxy2G03854 Aquilegia oxysepala HOM05D004487 ORTHO05D005483 7.1e-32 141.7 200 41.0
TAR626G1474 Trochodendron aralioides HOM05D004487 ORTHO05D005483 7.1e-32 141.7 236 40.3
SGA_v2.0_scaffold106G30591 Striga asiatica HOM05D004487 ORTHO05D005483 2.1e-31 140.2 230 40.9
Eucgr.I00528 Eucalyptus grandis HOM05D004487 ORTHO05D005483 4.6e-31 139.0 246 38.2
Glyma.09G092600 Glycine max HOM05D004487 ORTHO05D005483 1.3e-30 137.5 237 40.1
Sc16g0008840 Simmondsia chinensis HOM05D004487 ORTHO05D005483 1.3e-30 137.5 232 37.5
arahy.Tifrunner.gnm1.ann1.32WU9K Arachis hypogaea HOM05D004487 ORTHO05D005483 2.3e-30 136.7 199 42.2
Psat2g176760 Pisum sativum HOM05D004487 ORTHO05D005483 3.9e-30 136.0 236 39.4
arahy.Tifrunner.gnm1.ann1.9RVJ5A Arachis hypogaea HOM05D004487 ORTHO05D005483 6.6e-30 135.2 198 41.9
Lj2A942G27 Lonicera japonica HOM05D004487 ORTHO05D005483 9.5e-29 131.3 203 43.3
Nitab4.5_0007222g0010 Nicotiana tabacum HOM05D004487 ORTHO05D005483 1.6e-28 130.6 233 38.6
Ah.04g161200 Amaranthus hybridus HOM05D004487 ORTHO05D005483 3.6e-28 129.4 199 38.2
arahy.Tifrunner.gnm1.ann1.Y72RXW Arachis hypogaea HOM05D004487 ORTHO05D005483 1.1e-27 127.9 200 41.0
VMungo1309G0247 Vigna mungo HOM05D004487 ORTHO05D005483 1.1e-27 127.9 237 38.8
Sabra05G0067500 Salix brachista HOM05D004487 ORTHO05D005483 1.8e-27 127.1 234 40.2
TPR.G36682 Trifolium pratense HOM05D005330 ORTHO05D006489 5.2e-27 125.6 205 40.0
arahy.Tifrunner.gnm1.ann1.L7ETT7 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.7e-25 120.6 168 44.0
Actinidia33369 Actinidia chinensis HOM05D004487 ORTHO05D005483 2.9e-25 119.8 163 41.7
HanXRQChr07g0202331 Helianthus annuus HOM05D004487 ORTHO05D005483 2.9e-25 119.8 162 40.7
Hma1.2p1_0375F.1_g138570 Hydrangea macrophylla HOM05D004487 ORTHO05D005483 2.9e-25 119.8 122 54.1
Lj2A929T16 Lonicera japonica HOM05D004487 ORTHO05D005483 8.3e-25 118.2 242 42.1
Os08g0290400 Oryza sativa ssp. japonica HOM05D004487 ORTHO05D005483 1.2e-23 114.4 200 36.0
Zm00001eb192330 Zea mays HOM05D004487 ORTHO05D005483 1.6e-23 114.0 195 39.5
arahy.Tifrunner.gnm1.ann1.I45DC0 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.1e-21 107.8 197 36.5
HPP92_005242 Vanilla planifolia HOM05D004487 ORTHO05D005483 1.5e-21 107.5 229 34.9
CDE04G3174 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 1.9e-21 107.1 229 34.5
Dinv13358 Davidia involucrata HOM05D004487 ORTHO05D005483 1.9e-21 107.1 175 37.1
ATR0210G008 Amborella trichopoda HOM05D004487 ORTHO05D005483 1.2e-20 104.4 238 31.9
arahy.Tifrunner.gnm1.ann1.4M30AQ Arachis hypogaea HOM05D004487 ORTHO05D005483 2.1e-20 103.6 165 41.8
arahy.Tifrunner.gnm1.ann1.ZIF87W Arachis hypogaea HOM05D004487 ORTHO05D005483 1.1e-19 101.3 178 41.6
Lj6g0018564 Lotus japonicus HOM05D004487 ORTHO05D005483 3.1e-19 99.8 93 57.0
Dinv05687 Davidia involucrata HOM05D004487 ORTHO05D005483 8.9e-19 98.2 174 36.8
Lj4A903G12 Lonicera japonica HOM05D004487 ORTHO05D005483 7.6e-18 95.1 168 42.9
Sed0026038 Sechium edule HOM05D004487 ORTHO05D005483 7.6e-18 95.1 169 36.1
SHI54251 Sapria himalayana HOM05D004487 ORTHO05D005483 1.3e-17 94.4 238 35.3
TWI53G0384 Tripterygium wilfordii HOM05D004487 ORTHO05D005483 2.9e-17 93.2 83 56.6
CSS0002847 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 1.4e-16 90.9 95 55.8
SEGI_02201 Sequoiadendron giganteum HOM05D004487 ORTHO05D005483 2.4e-16 90.1 209 33.5
FAN26G0673 Fragaria x ananassa HOM05D004487 ORTHO05D005483 3.3e-13 79.7 146 34.9
CDE04G3300 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 1.3e-12 77.8 155 36.8
BraA01t00060Z Brassica rapa HOM05D004487 ORTHO05D032747 6.9e-11 72.0 114 43.9
BcaNung00884 Brassica carinata HOM05D004487 ORTHO05D032747 3.4e-10 69.7 77 48.1
Oeu043116.1 Olea europaea HOM05D004487 ORTHO05D005483 3.2e-08 63.2 153 30.1
Psat4g139920 Pisum sativum HOM05D004487 ORTHO05D005483 4.2e-08 62.8 137 32.1
arahy.Tifrunner.gnm1.ann1.PFH739 Arachis hypogaea HOM05D004487 ORTHO05D005483 7.1e-08 62.0 88 39.8
Psat4g139880 Pisum sativum HOM05D004487 ORTHO05D005483 7.1e-08 62.0 137 29.9
A01p00530 Brassica napus HOM05D004487 ORTHO05D032747 9.3e-08 61.6 74 48.6
arahy.Tifrunner.gnm1.ann1.3C43J1 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.6e-07 60.8 69 40.6
CDE06G2627 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 2.7e-07 60.1 132 34.8
arahy.Tifrunner.gnm1.ann1.PL6VNF Arachis hypogaea HOM05D004487 ORTHO05D005483 3.5e-07 59.7 70 42.9
CSS0015836 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 3.5e-07 59.7 33 84.8
CSS0022213 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 3.5e-07 59.7 33 84.8
arahy.Tifrunner.gnm1.ann1.RJV3W7 Arachis hypogaea HOM05D004487 ORTHO05D005483 4.6e-07 59.3 89 37.1
SGA_v2.0_scaffold83G26423 Striga asiatica HOM05D004487 ORTHO05D005483 1.3e-06 57.8 82 42.7
arahy.Tifrunner.gnm1.ann1.02EUR6 Arachis hypogaea HOM05D004487 ORTHO05D005483 3.9e-06 56.2 119 30.3
ATR0730G218 Amborella trichopoda HOM05D004487 ORTHO05D005483 6.6e-06 55.5 107 32.7


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