Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR214980 Cardamine hirsuta HOM05D000237 ORTHO05D115939 1.4e-30 135.6 67 100.0
CARHR214970 Cardamine hirsuta HOM05D000237 ORTHO05D005051 2.4e-17 91.7 69 76.8
AL7G46670 Arabidopsis lyrata HOM05D000237 ORTHO05D005051 1.2e-16 89.4 69 73.9
AT5G37790 Arabidopsis thaliana HOM05D000237 ORTHO05D005051 4.5e-16 87.4 69 72.5
Aa31LG9G17360 Aethionema arabicum HOM05D000237 ORTHO05D005051 1.3e-15 85.9 69 72.5
Sp7g04250 Schrenkiella parvula HOM05D000237 ORTHO05D005051 1.1e-14 82.8 69 69.6
Carub.0007s3297 Capsella rubella HOM05D000237 ORTHO05D005051 7.1e-14 80.1 70 70.0
BcaC08g44350 Brassica carinata HOM05D000237 ORTHO05D005051 3.0e-12 74.7 70 64.3
C06p17910 Brassica napus HOM05D000237 ORTHO05D005051 3.0e-12 74.7 70 64.3
BolC6t36981H Brassica oleracea HOM05D000237 ORTHO05D005051 3.9e-12 74.3 70 64.3
Thhalv10027710m.g Eutrema salsugineum HOM05D000237 ORTHO05D005051 5.1e-12 73.9 71 67.6
THA.LOC104805606 Tarenaya hassleriana HOM05D000237 ORTHO05D005051 3.3e-11 71.2 61 70.5
THA.LOC104822378 Tarenaya hassleriana HOM05D000237 ORTHO05D005051 7.4e-11 70.1 68 61.8
BcaB06g27140 Brassica carinata HOM05D000237 ORTHO05D005051 2.1e-10 68.6 71 62.0
BcaC02g09612 Brassica carinata HOM05D000237 ORTHO05D005051 8.2e-10 66.6 70 60.0
A04p10980 Brassica napus HOM05D000237 ORTHO05D005051 8.2e-10 66.6 70 60.0
C04p44730 Brassica napus HOM05D000237 ORTHO05D005051 8.2e-10 66.6 70 60.0
BolC4t26047H Brassica oleracea HOM05D000237 ORTHO05D005051 8.2e-10 66.6 70 60.0
BraA04t16763Z Brassica rapa HOM05D000237 ORTHO05D005051 8.2e-10 66.6 70 60.0
THA.LOC104823844 Tarenaya hassleriana HOM05D000237 ORTHO05D005051 1.2e-08 62.8 67 55.2
Atru.chr1.1842 Acer truncatum HOM05D000237 ORTHO05D005051 5.8e-08 60.5 66 54.5
AL2G24280 Arabidopsis lyrata HOM05D000237 ORTHO05D005051 1.3e-07 59.3 63 57.1
Carub.0002s1249 Capsella rubella HOM05D000237 ORTHO05D005051 1.3e-07 59.3 66 53.0
Aa31LG2G3110 Aethionema arabicum HOM05D000237 ORTHO05D005051 3.8e-07 57.8 65 58.5
Gohir.A12G056300 Gossypium hirsutum HOM05D000237 ORTHO05D005051 3.8e-07 57.8 64 59.4
Gorai.008G058700 Gossypium raimondii HOM05D000237 ORTHO05D005051 3.8e-07 57.8 64 59.4
Potri.004G089100 Populus trichocarpa HOM05D000237 ORTHO05D005051 4.9e-07 57.4 64 56.2
Duzib133G0765 Durio zibethinus HOM05D000237 ORTHO05D005051 6.5e-07 57.0 64 59.4
TWI53G2128 Tripterygium wilfordii HOM05D000237 ORTHO05D005051 8.4e-07 56.6 65 56.9
Sabra17G0106200 Salix brachista HOM05D000237 ORTHO05D005051 1.4e-06 55.8 64 54.7
Manes.01G116400 Manihot esculenta HOM05D000237 ORTHO05D005051 1.9e-06 55.5 64 54.7
Thecc.04G119200 Theobroma cacao HOM05D000237 ORTHO05D005051 4.2e-06 54.3 64 57.8
Cpa.g.sc116.32 Carica papaya HOM05D000237 ORTHO05D005051 5.5e-06 53.9 69 52.2
Duzib211G0213 Durio zibethinus HOM05D000237 ORTHO05D005051 5.5e-06 53.9 64 56.2
RcHm_v2.0_Chr3g0493411 Rosa chinensis HOM05D000237 ORTHO05D005051 7.1e-06 53.5 67 55.2
CARHR058430 Cardamine hirsuta HOM05D000237 ORTHO05D005051 9.3e-06 53.1 65 52.3
COL.COLO4_15734 Corchorus olitorius HOM05D000237 ORTHO05D005051 9.3e-06 53.1 64 54.7
TWI74G0299 Tripterygium wilfordii HOM05D000237 ORTHO05D005051 9.3e-06 53.1 64 56.2


User provided reference genes

Program Settings