Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 0.0e+00 2544.6 1265 100.0
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 0.0e+00 2446.8 1267 96.1
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 0.0e+00 2439.8 1268 95.7
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 0.0e+00 2438.7 1266 95.4
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 0.0e+00 2436.4 1266 95.3
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 0.0e+00 2435.6 1266 95.4
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 0.0e+00 2431.4 1266 94.8
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2430.6 1266 94.7
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 0.0e+00 2425.6 1267 94.6
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2422.1 1267 94.4
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 2399.4 1268 93.9
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 0.0e+00 2397.1 1270 93.2
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 0.0e+00 2338.5 1267 90.3
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 0.0e+00 2215.7 1266 85.5
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 0.0e+00 2213.7 1266 85.6
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 0.0e+00 2213.3 1270 85.0
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 0.0e+00 2211.0 1268 85.2
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 2210.3 1266 85.5
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 0.0e+00 2210.3 1260 86.3
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 0.0e+00 2205.3 1260 86.0
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 0.0e+00 2201.8 1270 84.6
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 0.0e+00 2200.6 1267 84.7
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 0.0e+00 2200.2 1267 84.4
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 0.0e+00 2199.9 1267 85.3
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 0.0e+00 2198.3 1264 85.0
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2196.8 1267 84.8
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 0.0e+00 2196.4 1267 84.7
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2194.1 1267 84.7
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2192.9 1267 84.5
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2191.4 1267 84.7
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2191.4 1270 84.0
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 0.0e+00 2187.1 1268 84.1
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2186.8 1270 83.9
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 0.0e+00 2186.0 1267 84.6
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2184.5 1267 83.6
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 2177.5 1268 82.8
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 0.0e+00 2174.8 1264 83.9
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 0.0e+00 2167.5 1265 83.9
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 0.0e+00 2167.1 1263 83.7
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 0.0e+00 2166.0 1265 83.5
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 0.0e+00 2164.8 1267 82.3
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 0.0e+00 2163.7 1267 82.3
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2162.5 1268 82.3
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 0.0e+00 2162.1 1266 83.7
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 0.0e+00 2161.7 1267 82.3
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 0.0e+00 2160.6 1265 82.2
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2160.6 1268 82.4
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2159.8 1265 82.3
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 0.0e+00 2159.8 1267 83.7
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2159.4 1264 83.6
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 0.0e+00 2158.3 1275 82.5
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2157.5 1266 83.0
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2152.5 1266 82.9
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 0.0e+00 2151.3 1264 83.3
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2150.9 1270 82.8
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 0.0e+00 2148.6 1265 82.9
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 0.0e+00 2146.3 1268 82.3
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2145.9 1264 83.1
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 0.0e+00 2143.6 1270 81.6
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2142.5 1264 83.0
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 0.0e+00 2139.8 1265 82.6
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2139.8 1259 83.2
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 0.0e+00 2139.4 1267 81.8
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2139.0 1238 84.2
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2135.5 1270 82.4
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 0.0e+00 2134.4 1271 81.4
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 0.0e+00 2129.4 1272 81.5
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 0.0e+00 2128.2 1270 81.9
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 0.0e+00 2127.8 1266 82.4
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 0.0e+00 2127.4 1267 82.6
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2122.1 1264 82.4
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 0.0e+00 2121.3 1268 81.6
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 0.0e+00 2120.5 1268 81.5
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 0.0e+00 2119.4 1262 81.5
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 0.0e+00 2119.0 1246 83.2
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 2118.6 1206 85.7
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 0.0e+00 2117.0 1268 81.2
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 0.0e+00 2115.9 1263 81.6
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 0.0e+00 2109.7 1265 81.6
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 0.0e+00 2106.3 1267 81.1
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2103.9 1267 80.7
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2097.0 1269 80.5
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 2096.6 1268 80.4
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 0.0e+00 2077.8 1274 81.2
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 0.0e+00 2071.2 1262 79.9
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 2069.3 1268 79.6
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 0.0e+00 2068.9 1271 79.9
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 0.0e+00 2068.9 1263 79.7
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 2063.9 1072 94.6
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2055.8 1265 79.9
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 0.0e+00 2052.3 1259 79.9
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2042.3 1270 78.1
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2015.7 1264 78.8
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 0.0e+00 2014.2 1267 77.9
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 0.0e+00 1989.5 1262 77.3
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1970.3 1159 83.3
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 0.0e+00 1943.3 1276 74.4
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1880.5 1271 73.2
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 0.0e+00 1869.4 1267 72.5
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 0.0e+00 1854.7 1252 73.6
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 0.0e+00 1845.5 1265 72.0
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1827.4 1191 75.9
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 0.0e+00 1796.2 1089 80.4
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1777.3 1268 70.3
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 0.0e+00 1776.5 1130 78.8
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1766.9 1267 71.0
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1617.4 966 80.3
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 0.0e+00 1555.8 1322 62.2
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 0.0e+00 1536.9 1047 72.7
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 0.0e+00 1362.8 1262 59.7
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 0.0e+00 1362.4 814 80.8
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1326.2 1330 53.6
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 0.0e+00 1316.6 1392 52.7
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 0.0e+00 1244.6 725 82.6
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 1155.6 1018 60.9
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 1122.5 808 71.4
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 1.2e-263 914.1 570 79.5
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 4.3e-261 905.6 1247 42.1
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 2.7e-255 886.3 502 86.9
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 1.7e-225 787.3 652 62.3
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 6.7e-214 748.8 527 72.1
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 6.8e-198 695.7 450 77.3
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.4e-182 644.8 389 83.5
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 3.9e-129 467.2 359 67.1
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 4.5e-117 427.2 313 71.9
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 7.2e-107 393.3 270 74.1
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 4.1e-78 297.7 475 41.3
SalBow2G0807 Salvia bowleyana HOM05D001937 ORTHO05D007024 4.9e-71 274.2 169 76.3
SalBow1G2752 Salvia bowleyana HOM05D001937 ORTHO05D007024 3.5e-69 268.1 169 75.7
SalBow1G1280 Salvia bowleyana HOM05D001937 ORTHO05D007024 2.9e-68 265.0 169 74.6
HPP92_019823 Vanilla planifolia HOM05D001937 ORTHO05D007024 9.8e-64 250.0 138 89.9
ECA234G0635 Erigeron canadensis HOM05D001937 ORTHO05D007024 9.5e-59 233.4 234 54.7
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 3.7e-47 194.9 116 78.4
HPP92_019822 Vanilla planifolia HOM05D001937 ORTHO05D007024 3.4e-40 171.8 155 63.2
TAR636G2347 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.7e-39 169.5 91 85.7
ECA234G4540 Erigeron canadensis HOM05D016619 ORTHO05D007024 2.4e-38 165.6 192 52.1
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 4.6e-29 134.8 101 61.4
HPP92_019824 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.1e-25 123.6 104 60.6


User provided reference genes

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