Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR210690 Cardamine hirsuta HOM05D002909 ORTHO05D000493 3.0e-90 335.1 166 100.0
Carub.0006s0158 Capsella rubella HOM05D002909 ORTHO05D000493 3.1e-74 282.0 165 82.4
AL6G12050 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 3.7e-72 275.0 166 80.1
AT3G28410 Arabidopsis thaliana HOM05D002909 ORTHO05D000493 1.2e-67 260.0 167 76.6
AT5G02700 Arabidopsis thaliana HOM05D002909 ORTHO05D000493 1.3e-61 240.0 166 73.5
CARHR210560 Cardamine hirsuta HOM05D002909 ORTHO05D000493 6.2e-59 231.1 170 71.2
CARHR015050 Cardamine hirsuta HOM05D002909 ORTHO05D000493 1.1e-55 220.3 173 68.2
Thhalv10013441m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 1.3e-53 213.4 166 66.9
C09p73900 Brassica napus HOM05D002909 ORTHO05D000493 3.5e-46 188.7 167 61.1
BolC3t12677H Brassica oleracea HOM05D002909 ORTHO05D000493 8.4e-40 167.5 165 55.2
C09p73770 Brassica napus HOM05D002909 ORTHO05D000493 1.9e-39 166.4 169 52.1
BolC7t40811H Brassica oleracea HOM05D002909 ORTHO05D000493 1.9e-39 166.4 165 54.5
BolC9t60110H Brassica oleracea HOM05D002909 ORTHO05D000493 1.9e-39 166.4 169 52.1
BcaB01g05876 Brassica carinata HOM05D002909 ORTHO05D000493 3.2e-39 165.6 165 54.5
BcaC02g09337 Brassica carinata HOM05D002909 ORTHO05D000493 7.1e-39 164.5 168 54.8
BcaC06g36437 Brassica carinata HOM05D002909 ORTHO05D000493 8.7e-37 157.5 162 53.1
C07p04150 Brassica napus HOM05D002909 ORTHO05D000493 8.7e-37 157.5 165 54.5
BcaC06g32019 Brassica carinata HOM05D002909 ORTHO05D000493 1.1e-36 157.1 165 52.7
A03p00910 Brassica napus HOM05D002909 ORTHO05D000493 3.3e-36 155.6 165 51.5
BraA03t09473Z Brassica rapa HOM05D002909 ORTHO05D000493 3.3e-36 155.6 165 51.5
CARHR210540 Cardamine hirsuta HOM05D002909 ORTHO05D000493 5.6e-36 154.8 168 57.1
C09p73760 Brassica napus HOM05D002909 ORTHO05D000493 9.6e-36 154.1 168 50.6
BolC9t60109H Brassica oleracea HOM05D002909 ORTHO05D000493 9.6e-36 154.1 168 50.6
BcaC02g10939 Brassica carinata HOM05D002909 ORTHO05D000493 2.4e-34 149.4 171 53.8
BcaNung03274 Brassica carinata HOM05D002909 ORTHO05D000493 2.4e-34 149.4 131 62.6
BraA07t29573Z Brassica rapa HOM05D002909 ORTHO05D000493 2.4e-34 149.4 167 53.9
A07p18610 Brassica napus HOM05D002909 ORTHO05D000493 3.1e-34 149.1 167 53.3
AL6G12190 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 9.0e-34 147.5 170 48.2
A03p04020 Brassica napus HOM05D002909 ORTHO05D000493 1.3e-32 143.7 170 48.8
Carub.0006s0171 Capsella rubella HOM05D002909 ORTHO05D000493 1.3e-32 143.7 169 48.5
BcaC06g32020 Brassica carinata HOM05D002909 ORTHO05D000493 3.8e-32 142.1 172 48.3
C03p01250 Brassica napus HOM05D002909 ORTHO05D000493 4.9e-32 141.7 178 48.9
BolC3t12684H Brassica oleracea HOM05D002909 ORTHO05D000493 4.9e-32 141.7 178 48.9
Thhalv10026908m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 4.9e-32 141.7 167 50.9
CARHR210580 Cardamine hirsuta HOM05D002909 ORTHO05D000493 8.4e-32 141.0 166 51.8
Aa31LG1G22020 Aethionema arabicum HOM05D002909 ORTHO05D000493 1.1e-31 140.6 168 48.2
Sp6g39690 Schrenkiella parvula HOM05D002909 ORTHO05D000493 1.4e-31 140.2 169 48.5
C09p73670 Brassica napus HOM05D002909 ORTHO05D000493 1.2e-30 137.1 173 49.7
BolC9t60097H Brassica oleracea HOM05D002909 ORTHO05D000493 1.2e-30 137.1 173 49.7
BcaB01g05867 Brassica carinata HOM05D002909 ORTHO05D000493 3.5e-30 135.6 170 49.4
BolC4t25729H Brassica oleracea HOM05D002909 ORTHO05D000493 1.8e-29 133.3 162 48.1
BcaC06g32021 Brassica carinata HOM05D002909 ORTHO05D000493 2.3e-29 132.9 169 46.7
BraA03t09745Z Brassica rapa HOM05D002909 ORTHO05D000493 6.7e-29 131.3 169 46.2
A10p32850 Brassica napus HOM05D002909 ORTHO05D000493 1.5e-28 130.2 169 46.2
BraA10t45322Z Brassica rapa HOM05D002909 ORTHO05D000493 1.5e-28 130.2 169 46.2
BcaC06g32031 Brassica carinata HOM05D002909 ORTHO05D000493 1.9e-28 129.8 170 46.5
BcaNung04729 Brassica carinata HOM05D002909 ORTHO05D000493 1.9e-28 129.8 169 45.6
C04p41470 Brassica napus HOM05D002909 ORTHO05D000493 1.9e-28 129.8 162 47.5
BolC9t60108H Brassica oleracea HOM05D002909 ORTHO05D000493 1.9e-28 129.8 169 45.6
C03p01170 Brassica napus HOM05D002909 ORTHO05D000493 5.7e-28 128.3 126 53.2
C09p73750 Brassica napus HOM05D002909 ORTHO05D000493 9.6e-28 127.5 169 45.0
CARHR210420 Cardamine hirsuta HOM05D002909 ORTHO05D000493 8.2e-27 124.4 168 46.4
A04p07840 Brassica napus HOM05D002909 ORTHO05D000493 1.4e-26 123.6 162 46.9
BraA04t16472Z Brassica rapa HOM05D002909 ORTHO05D000493 1.4e-26 123.6 162 46.9
BraA07t29574Z Brassica rapa HOM05D002909 ORTHO05D000493 1.8e-26 123.2 159 49.1
AT5G02930 Arabidopsis thaliana HOM05D002909 ORTHO05D000493 4.0e-26 122.1 171 43.9
CARHR093470 Cardamine hirsuta HOM05D002909 ORTHO05D000493 4.5e-25 118.6 164 45.7
BcaB03g15699 Brassica carinata HOM05D002909 ORTHO05D000493 1.7e-24 116.7 165 41.2
A07p29890 Brassica napus HOM05D002909 ORTHO05D000493 6.5e-24 114.8 165 40.6
Thhalv10027265m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 1.9e-23 113.2 136 48.5
Thhalv10027555m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 1.9e-23 113.2 162 45.7
CARHR290810 Cardamine hirsuta HOM05D002909 ORTHO05D000493 4.2e-23 112.1 156 46.8
Carub.0001s3546 Capsella rubella HOM05D002909 ORTHO05D000493 2.1e-22 109.8 164 43.3
BcaNung04728 Brassica carinata HOM05D002909 ORTHO05D000493 2.7e-22 109.4 216 35.2
AL4G21500 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 4.6e-22 108.6 169 43.2
C03p01260 Brassica napus HOM05D002909 ORTHO05D000493 4.6e-22 108.6 164 41.5
BolC3t12685H Brassica oleracea HOM05D002909 ORTHO05D000493 4.6e-22 108.6 164 41.5
CARHR093450 Cardamine hirsuta HOM05D002909 ORTHO05D000493 6.1e-22 108.2 170 41.2
BolC4t22344H Brassica oleracea HOM05D002909 ORTHO05D000493 1.0e-21 107.5 173 42.8
A03p22610 Brassica napus HOM05D000223 ORTHO05D001193 1.3e-21 107.1 171 42.1
BolC6t38534H Brassica oleracea HOM05D002909 ORTHO05D000493 1.8e-21 106.7 164 39.6
BcaB01g05865 Brassica carinata HOM05D002909 ORTHO05D000493 8.7e-21 104.4 134 47.0
Carub.0001s3548 Capsella rubella HOM05D002909 ORTHO05D000493 8.7e-21 104.4 162 42.0
AL6G12210 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 1.1e-20 104.0 165 40.0
Carub.0001s3547 Capsella rubella HOM05D002909 ORTHO05D000493 1.5e-20 103.6 162 41.4
BcaB02g09042 Brassica carinata HOM05D002909 ORTHO05D000493 1.9e-20 103.2 167 41.3
Carub.0002s0507 Capsella rubella HOM05D002909 ORTHO05D000493 2.5e-20 102.8 171 40.4
Carub.0006s0172 Capsella rubella HOM05D002909 ORTHO05D000493 2.5e-20 102.8 162 39.5
Carub.0001s3549 Capsella rubella HOM05D002909 ORTHO05D000493 3.3e-20 102.4 162 40.1
C04p07200 Brassica napus HOM05D002909 ORTHO05D000493 7.4e-20 101.3 166 41.6
BcaC02g12135 Brassica carinata HOM05D002909 ORTHO05D000493 9.7e-20 100.9 173 41.0
BcaC02g12137 Brassica carinata HOM05D002909 ORTHO05D000493 9.7e-20 100.9 166 41.0
BcaC05g28665 Brassica carinata HOM05D002909 ORTHO05D000493 9.7e-20 100.9 165 39.4
BolC5t33510H Brassica oleracea HOM05D002909 ORTHO05D000493 9.7e-20 100.9 165 39.4
BraA05t21998Z Brassica rapa HOM05D002909 ORTHO05D000493 9.7e-20 100.9 166 39.8
Thhalv10017536m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 9.7e-20 100.9 153 44.4
AL1G15160 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 1.3e-19 100.5 165 42.4
AL6G12200 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 1.3e-19 100.5 166 39.2
BcaC05g28664 Brassica carinata HOM05D002909 ORTHO05D000493 1.6e-19 100.1 170 38.2
BolC5t33508H Brassica oleracea HOM05D002909 ORTHO05D000493 1.6e-19 100.1 170 38.2
C04p23450 Brassica napus HOM05D002909 ORTHO05D000493 2.2e-19 99.8 160 45.0
A05p31650 Brassica napus HOM05D002909 ORTHO05D000493 4.8e-19 98.6 165 39.4
Sp2g05870 Schrenkiella parvula HOM05D002909 ORTHO05D000493 1.1e-18 97.4 163 40.5
SpUn0028_0070 Schrenkiella parvula HOM05D002909 ORTHO05D000493 1.1e-18 97.4 163 40.5
AL4G15410 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 1.4e-18 97.1 162 40.7
BcaB06g25936 Brassica carinata HOM05D002909 ORTHO05D000493 1.8e-18 96.7 165 39.4
BraA05t21996Z Brassica rapa HOM05D002909 ORTHO05D000493 1.8e-18 96.7 172 38.4
C05p47700 Brassica napus HOM05D002909 ORTHO05D000493 3.1e-18 95.9 166 39.8
A05p31390 Brassica napus HOM05D002909 ORTHO05D000493 5.3e-18 95.1 166 40.4
BraA05t21978Z Brassica rapa HOM05D002909 ORTHO05D000493 5.3e-18 95.1 166 40.4
AT3G03360 Arabidopsis thaliana HOM05D002909 ORTHO05D000493 6.9e-18 94.7 168 42.3
A05p31620 Brassica napus HOM05D002909 ORTHO05D000493 9.0e-18 94.4 145 38.6
BraA05t21995Z Brassica rapa HOM05D002909 ORTHO05D000493 9.0e-18 94.4 145 38.6
AL1G67340 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 1.2e-17 94.0 164 39.0
BolC5t33479H Brassica oleracea HOM05D002909 ORTHO05D000493 1.2e-17 94.0 166 39.8
BcaNung00595 Brassica carinata HOM05D002909 ORTHO05D000493 1.5e-17 93.6 133 43.6
C01p03500 Brassica napus HOM05D002909 ORTHO05D000493 1.5e-17 93.6 133 43.6
BolC1t00339H Brassica oleracea HOM05D002909 ORTHO05D000493 1.5e-17 93.6 133 43.6
Thhalv10015785m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 2.0e-17 93.2 180 38.9
C05p47940 Brassica napus HOM05D002909 ORTHO05D000493 4.5e-17 92.0 145 37.9
A05p30770 Brassica napus HOM05D002909 ORTHO05D000493 5.9e-17 91.7 164 38.4
BraA05t21980Z Brassica rapa HOM05D002909 ORTHO05D000493 5.9e-17 91.7 165 39.4
AL3G31320 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 7.7e-17 91.3 140 40.0
BcaNung03314 Brassica carinata HOM05D002909 ORTHO05D000493 7.7e-17 91.3 162 36.4
AL6G12220 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 1.0e-16 90.9 125 44.0
AL6G44930 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 1.7e-16 90.1 162 38.9
BraA01t00300Z Brassica rapa HOM05D002909 ORTHO05D000493 1.7e-16 90.1 161 37.3
BraA05t21919Z Brassica rapa HOM05D002909 ORTHO05D000493 1.7e-16 90.1 168 38.1
Thhalv10022165m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 2.2e-16 89.7 162 37.7
A09p18730 Brassica napus HOM05D002909 ORTHO05D000493 3.8e-16 89.0 165 37.6
AL108U10040 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 5.0e-16 88.6 153 45.1
C05p48020 Brassica napus HOM05D002909 ORTHO05D000493 6.5e-16 88.2 123 44.7
Carub.0006s0173 Capsella rubella HOM05D002909 ORTHO05D000493 8.5e-16 87.8 125 44.0
Carub.0004s0321 Capsella rubella HOM05D002909 ORTHO05D000493 1.4e-15 87.0 159 37.1
BcaC04g22094 Brassica carinata HOM05D002909 ORTHO05D000493 2.5e-15 86.3 162 35.8
Thhalv10021970m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 3.2e-15 85.9 162 38.3
BcaB07g31152 Brassica carinata HOM05D002909 ORTHO05D000493 4.2e-15 85.5 167 38.3
C04p23470 Brassica napus HOM05D002909 ORTHO05D000493 4.2e-15 85.5 56 78.6
C05p46680 Brassica napus HOM05D002909 ORTHO05D000493 4.2e-15 85.5 168 36.9
A05p31410 Brassica napus HOM05D002909 ORTHO05D000493 5.5e-15 85.1 158 38.6
A09p18750 Brassica napus HOM05D002909 ORTHO05D000493 5.5e-15 85.1 163 35.6
BraA09t37498Z Brassica rapa HOM05D002909 ORTHO05D000493 5.5e-15 85.1 163 35.6
CARHR210400 Cardamine hirsuta HOM05D002909 ORTHO05D000493 5.5e-15 85.1 167 36.5
BcaB05g21858 Brassica carinata HOM05D002909 ORTHO05D000493 7.2e-15 84.7 88 53.4
BcaC05g28567 Brassica carinata HOM05D002909 ORTHO05D000493 2.1e-14 83.2 164 36.6
BcaNung03626 Brassica carinata HOM05D002909 ORTHO05D000493 2.1e-14 83.2 138 39.1
BolC5t33396H Brassica oleracea HOM05D002909 ORTHO05D000493 2.1e-14 83.2 164 36.6
A05p30760 Brassica napus HOM05D002909 ORTHO05D000493 2.7e-14 82.8 166 37.3
BolC4t23850H Brassica oleracea HOM05D002909 ORTHO05D000493 4.6e-14 82.0 56 76.8
Thhalv10025165m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 6.1e-14 81.6 160 38.8
AL6G12380 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 7.9e-14 81.3 71 54.9
AT5G02910 Arabidopsis thaliana HOM05D002909 ORTHO05D000493 1.0e-13 80.9 66 59.1
BraA05t21915Z Brassica rapa HOM05D002909 ORTHO05D000493 1.0e-13 80.9 140 40.0
BolC5t33509H Brassica oleracea HOM05D002909 ORTHO05D000493 5.1e-13 78.6 89 49.4
C09p31710 Brassica napus HOM05D002909 ORTHO05D000493 8.8e-13 77.8 161 39.1
C09p31760 Brassica napus HOM05D002909 ORTHO05D000493 8.8e-13 77.8 161 39.1
BolC9t56026H Brassica oleracea HOM05D002909 ORTHO05D000493 8.8e-13 77.8 161 39.1
BolC9t56033H Brassica oleracea HOM05D002909 ORTHO05D000493 8.8e-13 77.8 161 39.1
A05p31430 Brassica napus HOM05D002909 ORTHO05D000493 4.3e-12 75.5 88 47.7
BraA05t21982Z Brassica rapa HOM05D002909 ORTHO05D000493 4.3e-12 75.5 88 47.7
C05p47960 Brassica napus HOM05D002909 ORTHO05D000493 5.7e-12 75.1 89 48.3
C05p47750 Brassica napus HOM05D002909 ORTHO05D000493 7.4e-12 74.7 93 47.3
BolC5t33490H Brassica oleracea HOM05D002909 ORTHO05D000493 2.8e-11 72.8 93 48.4
CARHR210380 Cardamine hirsuta HOM05D002909 ORTHO05D000493 6.3e-11 71.6 164 33.5
AL1G55004 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 1.1e-10 70.9 71 49.3
BcaC05g28646 Brassica carinata HOM05D002909 ORTHO05D000493 1.4e-10 70.5 86 46.5
AL3G41860 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 1.8e-10 70.1 87 43.7
AL4G36770 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 2.4e-10 69.7 160 34.4
AL380U10020 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 5.3e-10 68.6 160 33.8
BolC5t33489H Brassica oleracea HOM05D002909 ORTHO05D000493 6.9e-10 68.2 79 49.4
Carub.0002s0692 Capsella rubella HOM05D002909 ORTHO05D000493 3.4e-09 65.9 56 60.7
C09p23440 Brassica napus HOM05D002909 ORTHO05D000493 4.5e-09 65.5 59 55.9
C05p47740 Brassica napus HOM05D002909 ORTHO05D000493 7.7e-09 64.7 142 34.5
BraA03t11487Z Brassica rapa HOM05D000223 ORTHO05D001193 1.7e-08 63.5 88 42.0
CARHR135220 Cardamine hirsuta HOM05D002909 ORTHO05D000493 3.8e-08 62.4 66 48.5
AL108U10020 Arabidopsis lyrata HOM05D004762 ORTHO05D005972 6.5e-08 61.6 85 45.9
AL4G37920 Arabidopsis lyrata HOM05D004762 ORTHO05D005972 6.5e-08 61.6 85 45.9
AL4G38580 Arabidopsis lyrata HOM05D000001 ORTHO05D000003 1.1e-07 60.8 163 31.3
CARHR210390 Cardamine hirsuta HOM05D002909 ORTHO05D000493 1.1e-07 60.8 131 31.3
Potri.001G322900 Populus trichocarpa HOM05D001396 ORTHO05D000493 1.1e-07 60.8 140 30.0
Dinv39820 Davidia involucrata HOM05D001396 ORTHO05D000493 1.4e-07 60.5 142 28.2
Carub.0006s0055 Capsella rubella HOM05D002909 ORTHO05D000493 1.9e-07 60.1 60 50.0
Duzib235G1341 Durio zibethinus HOM05D001396 ORTHO05D000493 3.2e-07 59.3 138 29.0
BcaC09g49523 Brassica carinata HOM05D002909 ORTHO05D000493 7.2e-07 58.2 174 30.5
A03p00970 Brassica napus HOM05D002909 ORTHO05D000493 7.2e-07 58.2 89 41.6
QL04p018450 Quercus lobata HOM05D001396 ORTHO05D000493 7.2e-07 58.2 169 26.0
BolC9t55266H Brassica oleracea HOM05D002909 ORTHO05D000493 9.4e-07 57.8 162 30.2
CARHR210360 Cardamine hirsuta HOM05D002909 ORTHO05D000493 9.4e-07 57.8 100 39.0
BcaC04g21444 Brassica carinata HOM05D002909 ORTHO05D000493 1.6e-06 57.0 62 53.2
Dinv39821 Davidia involucrata HOM05D001396 ORTHO05D000493 1.6e-06 57.0 145 29.0
C03p26800 Brassica napus HOM05D000223 ORTHO05D001193 2.1e-06 56.6 58 48.3
BolC3t15065H Brassica oleracea HOM05D000223 ORTHO05D001193 2.1e-06 56.6 58 48.3
Carub.0002s0506 Capsella rubella HOM05D002909 ORTHO05D000493 2.7e-06 56.2 60 45.0
THA.LOC104809676 Tarenaya hassleriana HOM05D001396 ORTHO05D000493 3.6e-06 55.8 169 28.4
BcaC01g05421 Brassica carinata HOM05D002909 ORTHO05D000493 4.7e-06 55.5 57 47.4
BraA03t09479Z Brassica rapa HOM05D002909 ORTHO05D000493 6.1e-06 55.1 89 40.4
Thhalv10014041m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 6.1e-06 55.1 106 35.8


User provided reference genes

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