Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR209980 Cardamine hirsuta HOM05D000125 ORTHO05D000120 3.7e-66 254.6 117 100.0
CARHR176630 Cardamine hirsuta HOM05D000125 ORTHO05D000120 3.2e-25 118.6 92 55.4
Thhalv10022543m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 4.1e-25 118.2 120 50.0
AT1G44030 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 5.4e-25 117.9 118 50.0
Carub.0008s0788 Capsella rubella HOM05D000125 ORTHO05D000120 2.7e-24 115.5 106 48.1
AT1G44020 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 6.0e-24 114.4 118 49.2
Thhalv10028419m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 7.8e-24 114.0 124 47.6
AT4G10560 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 1.7e-23 112.8 99 49.5
CARHR209970 Cardamine hirsuta HOM05D000125 ORTHO05D000120 5.0e-23 111.3 99 48.5
AT1G62030 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 6.6e-23 110.9 99 48.5
Thhalv10022587m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 6.6e-23 110.9 117 43.6
AT1G66450 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 8.6e-23 110.5 114 43.9
AT5G03355 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 8.6e-23 110.5 93 51.6
Carub.0001s3307 Capsella rubella HOM05D000125 ORTHO05D000120 1.1e-22 110.2 88 54.5
AT2G28460 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 1.5e-22 109.8 104 46.2
Thhalv10015515m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 1.5e-22 109.8 121 46.3
Carub.0008s0264 Capsella rubella HOM05D000125 ORTHO05D000120 1.9e-22 109.4 97 50.5
AT5G48320 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 2.5e-22 109.0 93 48.4
AT4G02540 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 4.3e-22 108.2 97 46.4
AT1G66440 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 7.3e-22 107.5 90 50.0
Carub.0002s0299 Capsella rubella HOM05D000125 ORTHO05D000120 1.2e-21 106.7 99 44.4
AL383U10020 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 2.1e-21 105.9 104 44.2
AL5G23490 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 4.7e-21 104.8 118 43.2
AT4G13130 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 4.7e-21 104.8 89 49.4
CARHR118070 Cardamine hirsuta HOM05D000125 ORTHO05D000120 4.7e-21 104.8 106 45.3
AL4G21560 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 6.2e-21 104.4 104 43.3
AT5G37210 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 6.2e-21 104.4 93 49.5
CARHR029480 Cardamine hirsuta HOM05D000125 ORTHO05D000120 5.2e-20 101.3 89 48.3
C04p29530 Brassica napus HOM05D000125 ORTHO05D000120 6.8e-20 100.9 92 48.9
Thhalv10003369m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 6.8e-20 100.9 124 43.5
Carub.0006s2933 Capsella rubella HOM05D000125 ORTHO05D000120 5.8e-19 97.8 112 42.9
Carub.0006s2934 Capsella rubella HOM05D000125 ORTHO05D000120 5.8e-19 97.8 108 42.6
AT4G26380 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 7.5e-19 97.4 93 50.5
AT5G03360 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 4.9e-18 94.7 93 46.2
Carub.0003s2866 Capsella rubella HOM05D000125 ORTHO05D000120 6.4e-18 94.4 90 46.7
Carub.0007s2957 Capsella rubella HOM05D000125 ORTHO05D000120 8.3e-18 94.0 89 48.3
AT3G50010 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 2.7e-16 89.0 95 40.0
AT3G26240 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 4.6e-16 88.2 100 39.0
Carub.0006s0218 Capsella rubella HOM05D000125 ORTHO05D000120 6.6e-15 84.3 89 43.8
CARHR256020 Cardamine hirsuta HOM05D000125 ORTHO05D000120 1.9e-14 82.8 92 41.3
AL4G14040 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 4.3e-14 81.6 110 41.8
BolC6t39155H Brassica oleracea HOM05D000125 ORTHO05D000120 1.2e-13 80.1 108 36.1
Carub.0007s2956 Capsella rubella HOM05D000125 ORTHO05D000120 3.7e-10 68.6 41 63.4
THA.LOC104812543 Tarenaya hassleriana HOM05D000125 ORTHO05D000120 3.7e-10 68.6 93 31.2
AT4G15070 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 1.9e-09 66.2 93 35.5
BolC4t24487H Brassica oleracea HOM05D000125 ORTHO05D000120 5.4e-09 64.7 47 57.4
CARHR113370 Cardamine hirsuta HOM05D000125 ORTHO05D000120 2.7e-08 62.4 93 29.0
AL6G44610 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 1.0e-07 60.5 125 27.2
AT5G55770 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 1.3e-07 60.1 87 31.0
BcaNung00492 Brassica carinata HOM05D000125 ORTHO05D000120 1.7e-07 59.7 87 34.5
CARHR221510 Cardamine hirsuta HOM05D000125 ORTHO05D000120 2.3e-07 59.3 89 32.6
C07p57230 Brassica napus HOM05D000125 ORTHO05D000120 5.1e-07 58.2 88 35.2
BolC7t46193H Brassica oleracea HOM05D000125 ORTHO05D000120 5.1e-07 58.2 88 35.2
C03p13140 Brassica napus HOM05D000125 ORTHO05D000120 6.6e-07 57.8 89 28.1
Carub.0001s3077 Capsella rubella HOM05D000125 ORTHO05D000120 6.6e-07 57.8 41 51.2
AT2G17600 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 2.5e-06 55.8 116 28.4
A03p11390 Brassica napus HOM05D000125 ORTHO05D000120 4.3e-06 55.1 87 26.4
BraA03t10453Z Brassica rapa HOM05D000125 ORTHO05D000120 4.3e-06 55.1 87 26.4
Aa31LG11G5750 Aethionema arabicum HOM05D000125 ORTHO05D000120 5.6e-06 54.7 111 26.1
BcaB04g19336 Brassica carinata HOM05D000125 ORTHO05D000120 7.3e-06 54.3 94 27.7
C04p12600 Brassica napus HOM05D000125 ORTHO05D000120 7.3e-06 54.3 113 26.5
BolC4t22906H Brassica oleracea HOM05D000125 ORTHO05D000120 7.3e-06 54.3 113 26.5
A03p59170 Brassica napus HOM05D000125 ORTHO05D000120 9.5e-06 53.9 87 26.4
BraA03t14976Z Brassica rapa HOM05D000125 ORTHO05D000120 9.5e-06 53.9 87 26.4


User provided reference genes

Program Settings