Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR209430 Cardamine hirsuta HOM05D005212 ORTHO05D006353 1.4e-47 192.6 98 100.0
Thhalv10014438m.g Eutrema salsugineum HOM05D005212 ORTHO05D006353 1.6e-09 66.2 79 55.7
Sp4g26600 Schrenkiella parvula HOM05D005212 ORTHO05D006353 2.5e-07 58.9 41 70.7
BcaC02g07097 Brassica carinata HOM05D005212 ORTHO05D006353 4.2e-07 58.2 37 75.7
A04p33360 Brassica napus HOM05D000073 ORTHO05D006698 4.2e-07 58.2 37 75.7
C04p71050 Brassica napus HOM05D000073 ORTHO05D006698 4.2e-07 58.2 37 75.7
BolC4t28609H Brassica oleracea HOM05D000073 ORTHO05D006353 4.2e-07 58.2 37 75.7
BraA04t18796Z Brassica rapa HOM05D000073 ORTHO05D000033 4.2e-07 58.2 37 75.7
BcaB06g29383 Brassica carinata HOM05D005212 ORTHO05D006353 7.2e-07 57.4 37 75.7
BcaNung07052 Brassica carinata HOM05D005212 ORTHO05D006353 7.2e-07 57.4 37 75.7
AT2G44510 Arabidopsis thaliana HOM05D005212 ORTHO05D006353 1.2e-06 56.6 41 68.3
Carub.0004s2707 Capsella rubella HOM05D005212 ORTHO05D006353 1.6e-06 56.2 41 68.3
Thhalv10001552m.g Eutrema salsugineum HOM05D005212 ORTHO05D006353 1.6e-06 56.2 41 65.9
BcaC01g05169 Brassica carinata HOM05D005212 ORTHO05D006353 3.6e-06 55.1 41 68.3
C03p29590 Brassica napus HOM05D005212 ORTHO05D006353 3.6e-06 55.1 41 68.3
BolC3t15307H Brassica oleracea HOM05D005212 ORTHO05D006353 3.6e-06 55.1 41 68.3
CARHR139690 Cardamine hirsuta HOM05D005212 ORTHO05D006353 3.6e-06 55.1 41 65.9


User provided reference genes

Program Settings