Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR205340 Cardamine hirsuta HOM05D012198 ORTHO05D008817 1.2e-141 506.5 261 100.0
Carub.0001s0476 Capsella rubella HOM05D012198 ORTHO05D008817 4.6e-85 318.5 275 65.8
AT1G05430 Arabidopsis thaliana HOM05D012198 ORTHO05D008817 7.9e-85 317.8 274 64.6
Thhalv10008449m.g Eutrema salsugineum HOM05D012198 ORTHO05D008817 1.4e-81 307.0 279 63.8
AL1G15270 Arabidopsis lyrata HOM05D012198 ORTHO05D008817 5.3e-81 305.1 274 62.4
Sp1g04300 Schrenkiella parvula HOM05D012198 ORTHO05D008817 5.5e-78 295.0 261 63.2
BcaB02g06861 Brassica carinata HOM05D012198 ORTHO05D008817 1.8e-76 290.0 273 60.4
C05p03770 Brassica napus HOM05D012198 ORTHO05D008817 6.3e-74 281.6 281 59.1
BolC5t29154H Brassica oleracea HOM05D012198 ORTHO05D008817 6.3e-74 281.6 281 59.1
BcaC05g24387 Brassica carinata HOM05D012198 ORTHO05D008817 2.4e-73 279.6 281 58.7
A10p04130 Brassica napus HOM05D012198 ORTHO05D008817 2.7e-69 266.2 278 55.4
BraA10t42683Z Brassica rapa HOM05D012198 ORTHO05D008817 2.7e-69 266.2 278 55.4
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 4.8e-66 255.4 273 56.4
BcaC05g24389 Brassica carinata HOM05D012198 ORTHO05D008817 1.2e-56 224.2 151 70.9
THA.LOC104826165 Tarenaya hassleriana HOM05D012198 ORTHO05D008817 3.8e-55 219.2 261 52.1
TAR636G0739 Trochodendron aralioides HOM05D007633 ORTHO05D008817 7.5e-19 98.6 245 31.8
Nn1g02349 Nelumbo nucifera HOM05D007633 ORTHO05D008817 1.3e-18 97.8 242 34.3
Thecc.04G233700 Theobroma cacao HOM05D007633 ORTHO05D008817 3.7e-18 96.3 242 31.8
Gohir.A09G053600 Gossypium hirsutum HOM05D007633 ORTHO05D008817 8.3e-18 95.1 250 31.6
Dinv14003 Davidia involucrata HOM05D007633 ORTHO05D008817 1.1e-17 94.7 208 30.8
Phvul.002G044600 Phaseolus vulgaris HOM05D007633 ORTHO05D008817 1.1e-17 94.7 272 31.2
Gorai.006G055000 Gossypium raimondii HOM05D007633 ORTHO05D008817 1.9e-17 94.0 254 30.7
Gohir.D09G053050 Gossypium hirsutum HOM05D007633 ORTHO05D008817 2.4e-17 93.6 251 30.7
Hma1.2p1_0745F.1_g212150 Hydrangea macrophylla HOM05D007633 ORTHO05D008817 2.4e-17 93.6 251 31.1
CSS0018565 Camellia sinensis var. sinensis HOM05D007633 ORTHO05D008817 3.2e-17 93.2 244 31.6
QL06p002095 Quercus lobata HOM05D007633 ORTHO05D008817 3.2e-17 93.2 154 35.7
Cc03_g03920 Coffea canephora HOM05D007633 ORTHO05D008817 7.1e-17 92.0 263 31.6
CsaV3_3G013230 Cucumis sativus L. HOM05D007633 ORTHO05D008817 7.1e-17 92.0 264 31.1
HanXRQChr02g0035611 Helianthus annuus HOM05D007633 ORTHO05D008817 2.7e-16 90.1 221 33.5
MSTRG.21860 Avicennia marina HOM05D007633 ORTHO05D008817 6.0e-16 89.0 240 30.4
MELO3C006526.2 Cucumis melo HOM05D007633 ORTHO05D008817 6.0e-16 89.0 264 30.3
CANSAT78G1135 Cannabis sativa HOM05D007633 ORTHO05D008817 7.8e-16 88.6 264 29.2
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 1.0e-15 88.2 261 29.5
Ciclev10005651m.g Citrus clementina HOM05D007633 ORTHO05D008817 1.3e-15 87.8 254 29.5
ATR0697G107 Amborella trichopoda HOM05D007633 ORTHO05D008817 1.7e-15 87.4 224 32.1
Atru.chr4.2449 Acer truncatum HOM05D007633 ORTHO05D008817 3.0e-15 86.7 272 27.9
Cfa015662 Carpinus fangiana HOM05D007633 ORTHO05D008817 3.9e-15 86.3 262 29.4
Manes.03G177200 Manihot esculenta HOM05D007633 ORTHO05D008817 3.9e-15 86.3 264 30.3
Haze_00885 Corylus avellana HOM05D007633 ORTHO05D008817 5.1e-15 85.9 147 34.7
Glyma.01G237200 Glycine max HOM05D007633 ORTHO05D008817 1.5e-14 84.3 262 30.5
Prupe.1G015500 Prunus persica HOM05D007633 ORTHO05D008817 3.3e-14 83.2 146 37.0
Glyma.11G006100 Glycine max HOM05D007633 ORTHO05D008817 5.6e-14 82.4 272 28.7
Eucgr.H03451 Eucalyptus grandis HOM05D007633 ORTHO05D008817 7.3e-14 82.0 285 28.1
Oeu011618.1 Olea europaea HOM05D007633 ORTHO05D008817 1.2e-13 81.3 204 28.9
Psat4g209480 Pisum sativum HOM05D007633 ORTHO05D008817 2.8e-13 80.1 189 33.3
Rhsim02G0025900 Rhododendron simsii HOM05D007633 ORTHO05D008817 3.6e-13 79.7 211 28.0
FAN02G3335 Fragaria x ananassa HOM05D007633 ORTHO05D008817 6.2e-13 79.0 281 27.8
Potri.008G154200 Populus trichocarpa HOM05D007633 ORTHO05D008817 1.1e-12 78.2 244 27.5
HPP92_006116 Vanilla planifolia HOM05D007633 ORTHO05D008817 1.1e-12 78.2 160 31.9
PGR004G0463 Punica granatum HOM05D007633 ORTHO05D008817 1.4e-12 77.8 247 29.6
RcHm_v2.0_Chr4g0415951 Rosa chinensis HOM05D007633 ORTHO05D008817 1.4e-12 77.8 262 27.9
FAN22G0362 Fragaria x ananassa HOM05D007633 ORTHO05D008817 1.8e-12 77.4 270 26.7
Potri.010G086300 Populus trichocarpa HOM05D007633 ORTHO05D008817 1.8e-12 77.4 255 26.7
TPR.G38043 Trifolium pratense HOM05D007633 ORTHO05D008817 3.1e-12 76.6 255 30.6
Lalb_Chr01g0013131 Lupinus albus HOM05D007633 ORTHO05D008817 6.8e-12 75.5 273 28.9
VMungo1215G1793 Vigna mungo HOM05D007633 ORTHO05D008817 6.8e-12 75.5 275 27.3
GSVIVG01017995001 Vitis vinifera HOM05D007633 ORTHO05D008817 8.9e-12 75.1 252 27.0
FvH4_4g16290 Fragaria vesca HOM05D007633 ORTHO05D008817 1.5e-11 74.3 256 26.6
FAN12G0707 Fragaria x ananassa HOM05D007633 ORTHO05D008817 1.5e-11 74.3 256 26.6
Actinidia36954 Actinidia chinensis HOM05D007633 ORTHO05D008817 3.4e-11 73.2 166 28.9
TWI73G0352 Tripterygium wilfordii HOM05D007633 ORTHO05D008817 3.4e-11 73.2 268 28.4
LjContig00408g0001251 Lotus japonicus HOM05D007633 ORTHO05D008817 4.4e-11 72.8 286 28.7
Ca_24403_v3 Cicer arietinum L. HOM05D007633 ORTHO05D008817 5.8e-11 72.4 246 30.5
Aqoxy2G03409 Aquilegia oxysepala HOM05D007633 ORTHO05D008817 1.3e-10 71.2 229 26.2
Lsat_1_v5_gn_7_64401 Lactuca sativa HOM05D007633 ORTHO05D008817 1.3e-10 71.2 213 28.2
Sed0010969 Sechium edule HOM05D007633 ORTHO05D008817 1.3e-10 71.2 176 33.5
Duzib212G0599 Durio zibethinus HOM05D007633 ORTHO05D008817 1.7e-10 70.9 178 31.5
Migut.N00191 Erythranthe guttata HOM05D007633 ORTHO05D008817 2.2e-10 70.5 240 29.2
Medtr5g006410 Medicago truncatula HOM05D007633 ORTHO05D008817 2.9e-10 70.1 247 29.6
SalBow3G0862 Salvia bowleyana HOM05D007633 ORTHO05D008817 2.9e-10 70.1 226 31.4
AUR62034710 Chenopodium quinoa HOM05D007633 ORTHO05D008817 4.9e-10 69.3 196 27.6
CiPaw.01G167500 Carya illinoinensis HOM05D007633 ORTHO05D008817 6.4e-10 68.9 255 27.1
PGSC0003DMG400032254 Solanum tuberosum HOM05D007633 ORTHO05D008817 8.4e-10 68.6 221 30.3
SEGI_17234 Sequoiadendron giganteum HOM05D007633 ORTHO05D008817 1.4e-09 67.8 167 32.9
Sopen09g031040 Solanum pennellii HOM05D007633 ORTHO05D008817 1.4e-09 67.8 223 29.1
Sabra10G0057400 Salix brachista HOM05D007633 ORTHO05D008817 3.2e-09 66.6 251 26.3
MD16G1195500 Malus domestica HOM05D007633 ORTHO05D008817 4.1e-09 66.2 247 27.9
Nitab4.5_0001342g0010 Nicotiana tabacum HOM05D007633 ORTHO05D008817 9.2e-09 65.1 221 30.3
Solyc09g082160.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 1.6e-08 64.3 238 28.6
Nitab4.5_0008118g0020 Nicotiana tabacum HOM05D007633 ORTHO05D008817 4.6e-08 62.8 258 27.9
ECA240G3784 Erigeron canadensis HOM05D000137 ORTHO05D000452 6.0e-08 62.4 224 28.6
Lsat_1_v5_gn_8_155361 Lactuca sativa HOM05D007633 ORTHO05D008817 1.3e-07 61.2 116 33.6
Sopen06g019290 Solanum pennellii HOM05D007633 ORTHO05D008817 2.3e-07 60.5 170 30.0
VMungo1215G1192 Vigna mungo HOM05D007633 ORTHO05D008817 3.0e-07 60.1 265 25.3
Cpa.g.sc58.94 Carica papaya HOM05D007633 ORTHO05D008817 3.9e-07 59.7 64 43.8
Nitab4.5_0001920g0040 Nicotiana tabacum HOM05D007633 ORTHO05D008817 6.6e-07 58.9 192 31.2
FAN07G1430 Fragaria x ananassa HOM05D007633 ORTHO05D008817 1.1e-06 58.2 198 26.3
Peaxi162Scf00092g00615 Petunia axillaris HOM05D007633 ORTHO05D008817 4.3e-06 56.2 187 29.9
Peaxi162Scf00192g01119 Petunia axillaris HOM05D007633 ORTHO05D008817 7.3e-06 55.5 243 25.5


User provided reference genes

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