Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR202220 Cardamine hirsuta HOM05D008824 ORTHO05D003125 2.6e-75 285.4 159 100.0
Thhalv10016092m.g Eutrema salsugineum HOM05D008824 ORTHO05D003125 1.8e-63 246.1 159 83.0
Sp6g32430 Schrenkiella parvula HOM05D008824 ORTHO05D003125 2.7e-59 232.3 159 84.9
AL6G21690 Arabidopsis lyrata HOM05D008824 ORTHO05D003125 7.7e-59 230.7 161 75.2
BcaB01g05491 Brassica carinata HOM05D008824 ORTHO05D003125 1.5e-57 226.5 159 78.0
BolC3t13066H Brassica oleracea HOM05D008824 ORTHO05D003125 1.5e-57 226.5 159 78.0
AT5G11070 Arabidopsis thaliana HOM05D008824 ORTHO05D003125 1.9e-57 226.1 162 74.1
BcaC04g19263 Brassica carinata HOM05D008824 ORTHO05D003125 2.1e-56 222.6 160 81.2
A10p26630 Brassica napus HOM05D008824 ORTHO05D003125 2.1e-56 222.6 160 81.2
C09p65790 Brassica napus HOM05D008824 ORTHO05D003125 2.1e-56 222.6 160 81.2
BolC9t59401H Brassica oleracea HOM05D008824 ORTHO05D003125 2.1e-56 222.6 160 81.2
BraA10t44721Z Brassica rapa HOM05D008824 ORTHO05D003125 2.1e-56 222.6 160 80.6
BcaNung07098 Brassica carinata HOM05D008824 ORTHO05D003125 2.8e-56 222.2 159 79.2
A03p04850 Brassica napus HOM05D008824 ORTHO05D003125 2.8e-56 222.2 159 79.2
BraA03t09824Z Brassica rapa HOM05D008824 ORTHO05D003125 2.8e-56 222.2 159 79.2
BraA02t05065Z Brassica rapa HOM05D008824 ORTHO05D003125 4.7e-56 221.5 159 74.8
BcaNung01909 Brassica carinata HOM05D008824 ORTHO05D003125 6.1e-56 221.1 159 76.7
BcaNung01911 Brassica carinata HOM05D008824 ORTHO05D003125 6.1e-56 221.1 159 76.7
BcaB01g06316 Brassica carinata HOM05D008824 ORTHO05D003125 8.0e-56 220.7 159 77.4
Carub.0006s0958 Capsella rubella HOM05D008824 ORTHO05D003125 8.9e-55 217.2 168 75.6
C03p05580 Brassica napus HOM05D008824 ORTHO05D003125 1.2e-54 216.9 159 78.0
Aa31LG3G16070 Aethionema arabicum HOM05D008824 ORTHO05D003125 2.2e-53 212.6 160 71.9
BcaC03g13348 Brassica carinata HOM05D008824 ORTHO05D003125 2.0e-43 179.5 137 69.3
C02p04840 Brassica napus HOM05D008824 ORTHO05D003125 2.0e-43 179.5 137 69.3
BolC2t06442H Brassica oleracea HOM05D008824 ORTHO05D003125 2.7e-43 179.1 137 68.6
A02p00820 Brassica napus HOM05D008824 ORTHO05D003125 6.0e-43 177.9 128 75.8
THA.LOC104815009 Tarenaya hassleriana HOM05D008824 ORTHO05D003125 5.8e-38 161.4 157 56.7
THA.LOC104814116 Tarenaya hassleriana HOM05D008824 ORTHO05D003125 8.3e-37 157.5 157 56.1
Manes.16G125900 Manihot esculenta HOM05D008824 ORTHO05D003125 1.8e-15 86.7 153 36.6
CiPaw.07G226900 Carya illinoinensis HOM05D003969 ORTHO05D003125 5.8e-14 81.6 157 40.1
Cfa013102 Carpinus fangiana HOM05D003969 ORTHO05D003125 4.9e-13 78.6 130 43.1
Haze_21463 Corylus avellana HOM05D008824 ORTHO05D003125 6.4e-13 78.2 147 40.1
QL02p020337 Quercus lobata HOM05D008824 ORTHO05D003125 1.1e-12 77.4 134 37.3
Manes.03G012100 Manihot esculenta HOM05D003969 ORTHO05D003125 4.6e-11 72.0 149 33.6
Thecc.09G019700 Theobroma cacao HOM05D003969 ORTHO05D003125 1.0e-10 70.9 159 34.6
Cpa.g.sc187.25 Carica papaya HOM05D008824 ORTHO05D003125 1.3e-10 70.5 145 35.9
Sabra18G0025300 Salix brachista HOM05D008824 ORTHO05D003125 1.3e-10 70.5 156 33.3
COL.COLO4_18912 Corchorus olitorius HOM05D003969 ORTHO05D003125 5.1e-10 68.6 149 34.9
Atru.chr7.2498 Acer truncatum HOM05D003969 ORTHO05D003125 6.6e-10 68.2 157 35.0
ClCG05G016610 Citrullus lanatus HOM05D003969 ORTHO05D003125 1.9e-09 66.6 140 37.1
Potri.003G070750 Populus trichocarpa HOM05D008824 ORTHO05D003125 1.9e-09 66.6 155 31.6
Nn2g12243 Nelumbo nucifera HOM05D003969 ORTHO05D003125 4.3e-09 65.5 131 37.4
Potri.006G259200 Populus trichocarpa HOM05D008824 ORTHO05D003125 9.6e-09 64.3 152 29.6
Ciclev10009935m.g Citrus clementina HOM05D003969 ORTHO05D003125 4.8e-08 62.0 151 33.8
CsaV3_4G036890 Cucumis sativus L. HOM05D003969 ORTHO05D003125 8.1e-08 61.2 125 36.8
Sabra06G0202600 Salix brachista HOM05D008824 ORTHO05D003125 1.8e-07 60.1 98 36.7
TAR626G0029 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.8e-07 60.1 129 37.2
Lalb_Chr24g0402081 Lupinus albus HOM05D013068 ORTHO05D003125 3.1e-07 59.3 144 29.9
ClCG08G013530 Citrullus lanatus HOM05D008824 ORTHO05D003125 5.3e-07 58.5 129 37.2
Migut.A00008 Erythranthe guttata HOM05D003969 ORTHO05D003125 5.3e-07 58.5 120 35.0
TAR636G2249 Trochodendron aralioides HOM05D003969 ORTHO05D003125 6.9e-07 58.2 121 33.9
TAR625G0404 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.5e-06 57.0 129 33.3
Dinv41425 Davidia involucrata HOM05D003969 ORTHO05D003125 2.6e-06 56.2 141 31.2
TAR383G0074 Trochodendron aralioides HOM05D003969 ORTHO05D003125 3.4e-06 55.8 136 34.6
Eucgr.C01687 Eucalyptus grandis HOM05D003969 ORTHO05D003125 7.6e-06 54.7 94 41.5
Oeu057292.1 Olea europaea HOM05D003969 ORTHO05D003125 7.6e-06 54.7 44 59.1
CSS0007982 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 9.9e-06 54.3 102 34.3


User provided reference genes

Program Settings