Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR201920 Cardamine hirsuta HOM05D004398 ORTHO05D005268 8.3e-48 193.4 96 100.0
AL6G21990 Arabidopsis lyrata HOM05D004398 ORTHO05D005268 7.7e-46 186.8 93 97.8
Carub.0006s0980 Capsella rubella HOM05D004398 ORTHO05D005268 7.7e-46 186.8 93 97.8
BcaB08g37069 Brassica carinata HOM05D004398 ORTHO05D005268 2.3e-45 185.3 93 96.8
C09p65530 Brassica napus HOM05D004398 ORTHO05D005268 2.9e-45 184.9 93 96.8
Thhalv10014874m.g Eutrema salsugineum HOM05D004398 ORTHO05D005268 2.9e-45 184.9 93 95.7
Sp6g32240 Schrenkiella parvula HOM05D004398 ORTHO05D005268 2.9e-45 184.9 93 95.7
BcaC04g19238 Brassica carinata HOM05D004398 ORTHO05D005268 8.6e-45 183.3 93 95.7
BcaNung01922 Brassica carinata HOM05D004398 ORTHO05D005268 8.6e-45 183.3 93 94.6
Manes.03G018300 Manihot esculenta HOM05D004398 ORTHO05D005268 8.6e-45 183.3 93 94.6
Manes.16G118300 Manihot esculenta HOM05D004398 ORTHO05D005268 8.6e-45 183.3 93 94.6
A10p26390 Brassica napus HOM05D004398 ORTHO05D005268 1.5e-44 182.6 93 94.6
BolC9t59376H Brassica oleracea HOM05D004398 ORTHO05D005268 1.5e-44 182.6 93 95.7
BraA10t44696Z Brassica rapa HOM05D004398 ORTHO05D005268 1.5e-44 182.6 93 94.6
Duzib150G1379 Durio zibethinus HOM05D004398 ORTHO05D005268 1.5e-44 182.6 93 93.5
Gohir.A08G090062 Gossypium hirsutum HOM05D004398 ORTHO05D005268 1.9e-44 182.2 93 93.5
Gohir.D08G102900 Gossypium hirsutum HOM05D004398 ORTHO05D005268 1.9e-44 182.2 93 93.5
Gorai.004G110900 Gossypium raimondii HOM05D004398 ORTHO05D005268 1.9e-44 182.2 93 93.5
Thecc.09G147500 Theobroma cacao HOM05D004398 ORTHO05D005268 1.9e-44 182.2 93 93.5
COL.COLO4_24002 Corchorus olitorius HOM05D004398 ORTHO05D005268 2.5e-44 181.8 93 92.5
Aa31LG3G15850 Aethionema arabicum HOM05D004398 ORTHO05D005268 3.3e-44 181.4 93 94.6
Potri.006G248900 Populus trichocarpa HOM05D004398 ORTHO05D005268 4.2e-44 181.0 93 92.5
Gohir.A04G025100 Gossypium hirsutum HOM05D004398 ORTHO05D005268 1.2e-43 179.5 93 92.5
Gohir.A04G025400 Gossypium hirsutum HOM05D004398 ORTHO05D005268 1.2e-43 179.5 93 92.5
Prupe.1G471800 Prunus persica HOM05D004398 ORTHO05D005268 1.2e-43 179.5 94 91.5
AT5G11340 Arabidopsis thaliana HOM05D004398 ORTHO05D005268 1.6e-43 179.1 93 93.5
Eucgr.C01806 Eucalyptus grandis HOM05D004398 ORTHO05D005268 1.6e-43 179.1 93 90.3
Gohir.D03G064300 Gossypium hirsutum HOM05D004398 ORTHO05D005268 1.6e-43 179.1 93 91.4
HanXRQChr13g0402451 Helianthus annuus HOM05D004398 ORTHO05D005268 1.6e-43 179.1 95 89.5
GSVIVG01035773001 Vitis vinifera HOM05D004398 ORTHO05D005268 1.6e-43 179.1 93 92.5
Dinv30193 Davidia involucrata HOM05D004398 ORTHO05D004293 2.1e-43 178.7 93 91.4
CiPaw.07G219500 Carya illinoinensis HOM05D004398 ORTHO05D005268 2.8e-43 178.3 93 91.4
Cfa013194 Carpinus fangiana HOM05D004398 ORTHO05D005268 3.6e-43 177.9 93 91.4
Gohir.A04G025500 Gossypium hirsutum HOM05D004398 ORTHO05D005268 3.6e-43 177.9 94 90.4
THA.LOC104815033 Tarenaya hassleriana HOM05D004398 ORTHO05D005268 4.7e-43 177.6 93 90.3
TAR636G1605 Trochodendron aralioides HOM05D002580 ORTHO05D005268 4.7e-43 177.6 93 92.5
MD15G1118400 Malus domestica HOM05D004398 ORTHO05D005268 6.1e-43 177.2 94 90.4
CSS0033658 Camellia sinensis var. sinensis HOM05D004398 ORTHO05D005268 8.0e-43 176.8 93 91.4
PGR031G0419 Punica granatum HOM05D004398 ORTHO05D005268 8.0e-43 176.8 93 90.3
Duzib187G0288 Durio zibethinus HOM05D004398 ORTHO05D005268 1.0e-42 176.4 93 90.3
Lsat_1_v5_gn_6_21660 Lactuca sativa HOM05D004398 ORTHO05D005268 1.0e-42 176.4 93 90.3
Medtr5g098790 Medicago truncatula HOM05D004398 ORTHO05D005268 1.0e-42 176.4 93 90.3
Sabra06G0194700 Salix brachista HOM05D004398 ORTHO05D005268 1.4e-42 176.0 93 88.2
Ciclev10009736m.g Citrus clementina HOM05D004398 ORTHO05D005268 1.8e-42 175.6 93 90.3
arahy.Tifrunner.gnm1.ann1.P67EX8 Arachis hypogaea HOM05D004398 ORTHO05D005268 2.3e-42 175.3 95 90.5
Nitab4.5_0007227g0020 Nicotiana tabacum HOM05D004398 ORTHO05D005268 2.3e-42 175.3 95 88.4
Phvul.008G289800 Phaseolus vulgaris HOM05D004398 ORTHO05D005268 3.0e-42 174.9 94 91.5
TWI34G0493 Tripterygium wilfordii HOM05D004398 ORTHO05D005268 4.0e-42 174.5 93 88.2
TWI63G1039 Tripterygium wilfordii HOM05D004398 ORTHO05D005268 4.0e-42 174.5 93 88.2
Gohir.A04G025200 Gossypium hirsutum HOM05D004398 ORTHO05D005268 5.2e-42 174.1 94 89.4
Actinidia20317 Actinidia chinensis HOM05D004398 ORTHO05D005268 6.8e-42 173.7 93 89.2
MSTRG.25860 Avicennia marina HOM05D004398 ORTHO05D005268 6.8e-42 173.7 90 91.1
DCAR_022890 Daucus carota HOM05D004398 ORTHO05D005268 6.8e-42 173.7 94 86.2
Glyma.02G309600 Glycine max HOM05D004398 ORTHO05D005268 8.9e-42 173.3 94 90.4
Rhsim07G0150800 Rhododendron simsii HOM05D004398 ORTHO05D005268 8.9e-42 173.3 94 90.4
VMungo0647G1556 Vigna mungo HOM05D004398 ORTHO05D005268 8.9e-42 173.3 94 90.4
MSTRG.13991 Avicennia marina HOM05D004398 ORTHO05D005268 1.2e-41 172.9 92 89.1
Gohir.A02G109708 Gossypium hirsutum HOM05D004398 ORTHO05D005268 1.2e-41 172.9 93 89.2
Lj1g0014596 Lotus japonicus HOM05D004398 ORTHO05D005268 1.2e-41 172.9 94 89.4
Potri.018G032400 Populus trichocarpa HOM05D004398 ORTHO05D005268 1.2e-41 172.9 93 89.2
Lalb_Chr17g0349351 Lupinus albus HOM05D004398 ORTHO05D005268 1.5e-41 172.6 94 90.4
Oeu032496.1 Olea europaea HOM05D004398 ORTHO05D005268 1.5e-41 172.6 90 90.0
Nitab4.5_0002339g0050 Nicotiana tabacum HOM05D004398 ORTHO05D005268 2.0e-41 172.2 93 83.9
PGSC0003DMG400026128 Solanum tuberosum HOM05D004398 ORTHO05D005268 2.0e-41 172.2 93 86.0
BcaC03g13363 Brassica carinata HOM05D004398 ORTHO05D005268 2.6e-41 171.8 93 91.4
C02p04990 Brassica napus HOM05D004398 ORTHO05D005268 2.6e-41 171.8 93 91.4
BolC2t06455H Brassica oleracea HOM05D004398 ORTHO05D005268 2.6e-41 171.8 93 91.4
CDE01G0001 Ceratophyllum demersum HOM05D004398 ORTHO05D005268 2.6e-41 171.8 93 87.1
Nitab4.5_0002000g0050 Nicotiana tabacum HOM05D004398 ORTHO05D005268 2.6e-41 171.8 91 87.9
TPR.G35885 Trifolium pratense HOM05D004398 ORTHO05D005268 2.6e-41 171.8 94 89.4
unitig_747.g21389 Utricularia gibba HOM05D001746 ORTHO05D001823 3.4e-41 171.4 94 90.4
ATR0618G325 Amborella trichopoda HOM05D004398 ORTHO05D005268 4.4e-41 171.0 93 86.0
CDE02G1057 Ceratophyllum demersum HOM05D004398 ORTHO05D005268 4.4e-41 171.0 93 86.0
ClCG08G013040 Citrullus lanatus HOM05D004398 ORTHO05D005268 4.4e-41 171.0 93 87.1
Cc11_g01650 Coffea canephora HOM05D004398 ORTHO05D005268 4.4e-41 171.0 93 88.2
CsaV3_2G031770 Cucumis sativus L. HOM05D004398 ORTHO05D005268 4.4e-41 171.0 95 84.2
QL12p031735 Quercus lobata HOM05D004398 ORTHO05D005268 4.4e-41 171.0 93 86.0
Atru.chr7.2357 Acer truncatum HOM05D004398 ORTHO05D005268 5.7e-41 170.6 92 88.0
Glyma.14G003300 Glycine max HOM05D004398 ORTHO05D005268 5.7e-41 170.6 94 89.4
Psat2g001840 Pisum sativum HOM05D004398 ORTHO05D005268 5.7e-41 170.6 94 88.3
MELO3C011228.2 Cucumis melo HOM05D004398 ORTHO05D005268 7.5e-41 170.2 93 86.0
Solyc06g065570.3 Solanum lycopersicum HOM05D004398 ORTHO05D005268 9.8e-41 169.9 93 83.9
Sopen06g024110 Solanum pennellii HOM05D004398 ORTHO05D005268 9.8e-41 169.9 93 83.9
Nitab4.5_0000508g0250 Nicotiana tabacum HOM05D004398 ORTHO05D005268 1.3e-40 169.5 93 82.8
THA.LOC104799227 Tarenaya hassleriana HOM05D004398 ORTHO05D005268 1.3e-40 169.5 93 86.0
A02p00960 Brassica napus HOM05D004398 ORTHO05D005268 1.7e-40 169.1 93 89.2
BraA02t05080Z Brassica rapa HOM05D004398 ORTHO05D005268 1.7e-40 169.1 93 89.2
Ca_06490_v3 Cicer arietinum L. HOM05D004398 ORTHO05D005268 1.7e-40 169.1 94 88.3
FAN24G0064 Fragaria x ananassa HOM05D004398 ORTHO05D005268 1.7e-40 169.1 95 84.2
RcHm_v2.0_Chr6g0298801 Rosa chinensis HOM05D004398 ORTHO05D005268 2.8e-40 168.3 95 83.2
FAN27G0432 Fragaria x ananassa HOM05D004398 ORTHO05D005268 4.9e-40 167.5 95 83.2
Nn2g11907 Nelumbo nucifera HOM05D004398 ORTHO05D005268 4.9e-40 167.5 93 87.1
CAN.G199.38 Capsicum annuum HOM05D004398 ORTHO05D005268 8.3e-40 166.8 94 84.0
Sed0007380 Sechium edule HOM05D004398 ORTHO05D005268 8.3e-40 166.8 93 86.0
SGA_v2.0_scaffold169G38624 Striga asiatica HOM05D004398 ORTHO05D005268 8.3e-40 166.8 91 85.7
TAR625G0264 Trochodendron aralioides HOM05D004398 ORTHO05D005268 8.3e-40 166.8 93 87.1
FAN15G0393 Fragaria x ananassa HOM05D004398 ORTHO05D005268 1.1e-39 166.4 95 82.1
Nn8g39345 Nelumbo nucifera HOM05D004398 ORTHO05D005268 1.8e-39 165.6 93 88.2
Lj7A716G42 Lonicera japonica HOM05D004398 ORTHO05D005268 3.2e-39 164.9 94 86.2
Sed0003647 Sechium edule HOM05D004398 ORTHO05D005268 3.2e-39 164.9 93 82.8
Solyc08g067440.2 Solanum lycopersicum HOM05D004398 ORTHO05D005268 3.2e-39 164.9 93 82.8
Sopen08g021370 Solanum pennellii HOM05D004398 ORTHO05D005268 3.2e-39 164.9 93 82.8
Hund03009 Selenicereus undatus HOM05D004398 ORTHO05D005268 9.2e-39 163.3 89 86.5
HanXRQChr02g0050741 Helianthus annuus HOM05D004398 ORTHO05D005268 1.2e-38 162.9 93 86.0
AUR62032353 Chenopodium quinoa HOM05D004398 ORTHO05D005268 2.0e-38 162.2 87 86.2
PSO017G1065 Papaver somniferum HOM05D004398 ORTHO05D005268 2.0e-38 162.2 93 82.8
PSO170G5542 Papaver somniferum HOM05D004398 ORTHO05D005268 2.0e-38 162.2 93 82.8
HanXRQChr02g0050671 Helianthus annuus HOM05D004398 ORTHO05D005268 2.7e-38 161.8 93 86.0
HanXRQChr02g0050691 Helianthus annuus HOM05D004398 ORTHO05D005268 2.7e-38 161.8 93 86.0
Sc09g0008690 Simmondsia chinensis HOM05D004398 ORTHO05D005268 2.7e-38 161.8 89 83.1
EL10Ac2g02565 Beta vulgaris HOM05D004398 ORTHO05D005268 7.8e-38 160.2 89 80.9
HPP92_024601 Vanilla planifolia HOM05D004398 ORTHO05D005268 7.8e-38 160.2 87 86.2
Aqoxy7G01991 Aquilegia oxysepala HOM05D004398 ORTHO05D005268 1.0e-37 159.8 90 83.3
Zm00001eb161820 Zea mays HOM05D004398 ORTHO05D005268 1.3e-37 159.5 92 85.9
AUR62041848 Chenopodium quinoa HOM05D004398 ORTHO05D005268 2.3e-37 158.7 87 83.9
Peaxi162Scf01343g00154 Petunia axillaris HOM05D004398 ORTHO05D005268 2.9e-37 158.3 109 71.6
ECA233G2050 Erigeron canadensis HOM05D004398 ORTHO05D005268 5.0e-37 157.5 93 80.6
vmacro05207 Vaccinium macrocarpon HOM05D004398 ORTHO05D005268 8.6e-37 156.8 133 63.2
CANSAT54G1633 Cannabis sativa HOM05D004398 ORTHO05D005268 1.5e-36 156.0 98 78.6
CANSAT54G2276 Cannabis sativa HOM05D004398 ORTHO05D005268 1.5e-36 156.0 98 78.6
CANSAT54G1009 Cannabis sativa HOM05D004398 ORTHO05D005268 2.5e-36 155.2 98 78.6
Os01g0610400 Oryza sativa ssp. japonica HOM05D004398 ORTHO05D005268 2.5e-36 155.2 92 83.7
Peaxi162Scf00251g01121 Petunia axillaris HOM05D004398 ORTHO05D005268 2.5e-36 155.2 94 78.7
SEGI_22963 Sequoiadendron giganteum HOM05D004398 ORTHO05D005268 7.3e-36 153.7 87 81.6
SalBow8G2141 Salvia bowleyana HOM05D004398 ORTHO05D005268 6.1e-35 150.6 96 78.1
SalBow8G2197 Salvia bowleyana HOM05D004398 ORTHO05D005268 6.1e-35 150.6 96 78.1
CAN.G211.13 Capsicum annuum HOM05D004398 ORTHO05D005268 8.0e-35 150.2 93 78.5
Lj8A616G45 Lonicera japonica HOM05D004398 ORTHO05D005268 1.0e-34 149.8 90 76.7
Cpa.g.sc91.31 Carica papaya HOM05D004398 ORTHO05D005268 4.0e-34 147.9 74 94.6
Pp3c13_8050 Physcomitrium patens HOM05D004398 ORTHO05D005268 5.2e-34 147.5 93 72.0
Mapoly0023s0029 Marchantia polymorpha HOM05D004398 ORTHO05D005268 1.7e-32 142.5 94 72.3
AagrBONN_evm.TU.Sc2ySwM_228.5405 Anthoceros agrestis HOM05D004398 ORTHO05D005268 6.4e-32 140.6 93 69.9
Hund25700 Selenicereus undatus HOM05D004398 ORTHO05D005268 6.4e-32 140.6 89 79.8
CAN.G59.9 Capsicum annuum HOM05D004562 ORTHO05D005435 7.0e-31 137.1 90 71.1
SMO114G0115 Selaginella moellendorffii HOM05D004398 ORTHO05D005268 2.7e-30 135.2 93 69.9
vmacro05203 Vaccinium macrocarpon HOM05D004398 ORTHO05D005268 6.0e-30 134.0 181 45.3
CAN.G165.5 Capsicum annuum HOM05D004398 ORTHO05D005268 1.6e-27 125.9 74 77.0
SHI54407 Sapria himalayana HOM05D004398 ORTHO05D005268 6.2e-27 124.0 94 69.1
SHI54562 Sapria himalayana HOM05D004398 ORTHO05D005268 5.2e-26 120.9 94 68.1
PRCOL_00002723 Prasinoderma coloniale HOM05D004398 ORTHO05D005268 6.4e-24 114.0 87 64.4
Cre02.g101850 Chlamydomonas reinhardtii HOM05D004398 ORTHO05D005268 2.5e-20 102.1 91 52.7
Glyma.14G123400 Glycine max HOM05D004398 ORTHO05D005268 2.8e-19 98.6 53 86.8
Actinidia13266 Actinidia chinensis HOM05D004398 ORTHO05D005268 4.7e-19 97.8 48 93.8
SMO356G0009 Selaginella moellendorffii HOM05D004398 ORTHO05D005268 5.2e-18 94.4 72 62.5
Haze_26917 Corylus avellana HOM05D004398 ORTHO05D005268 1.7e-16 89.4 85 47.1
Nitab4.5_0001780g0060 Nicotiana tabacum HOM05D004398 ORTHO05D005268 1.7e-16 89.4 72 65.3
FvH4_2g29780 Fragaria vesca HOM05D004398 ORTHO05D005268 1.9e-15 85.9 52 76.9
Lalb_Chr04g0247051 Lupinus albus HOM05D004398 ORTHO05D005268 7.1e-15 84.0 51 76.5
MCO16G331 Micromonas commoda HOM05D004398 ORTHO05D005268 9.2e-15 83.6 89 48.3
Migut.E01484 Erythranthe guttata HOM05D004398 ORTHO05D005268 1.3e-13 79.7 42 88.1
CBR_g51562 Chara braunii HOM05D004398 ORTHO05D005268 1.2e-11 73.2 41 78.0
Haze_21595 Corylus avellana HOM05D004398 ORTHO05D005268 1.4e-10 69.7 51 66.7
Haze_21593 Corylus avellana HOM05D004398 ORTHO05D005268 2.0e-09 65.9 41 78.0


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