Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR200750 Cardamine hirsuta HOM05D007739 ORTHO05D009838 8.2e-117 423.7 209 100.0
AL6G23160 Arabidopsis lyrata HOM05D007739 ORTHO05D009838 1.7e-74 283.1 178 79.2
Thhalv10014740m.g Eutrema salsugineum HOM05D007739 ORTHO05D009838 8.6e-74 280.8 174 80.5
AT5G12360 Arabidopsis thaliana HOM05D007739 ORTHO05D009838 4.4e-70 268.5 175 77.7
Sp6g31280 Schrenkiella parvula HOM05D007739 ORTHO05D009838 4.4e-70 268.5 177 78.5
A10p25460 Brassica napus HOM05D007739 ORTHO05D009838 5.2e-63 245.0 172 73.3
BolC9t59287H Brassica oleracea HOM05D007739 ORTHO05D009838 6.8e-63 244.6 172 74.4
C09p64530 Brassica napus HOM05D007739 ORTHO05D009838 4.4e-62 241.9 172 73.8
BraA10t44610Z Brassica rapa HOM05D007739 ORTHO05D009838 3.5e-59 232.3 172 70.9
Aa31LG3G14870 Aethionema arabicum HOM05D007739 ORTHO05D009838 4.6e-51 205.3 173 66.5
Sp3g12450 Schrenkiella parvula HOM05D007739 ORTHO05D009838 1.1e-25 120.9 173 45.7
BcaC01g03953 Brassica carinata HOM05D007739 ORTHO05D009838 5.6e-25 118.6 181 43.6
Thhalv10021564m.g Eutrema salsugineum HOM05D007739 ORTHO05D009838 1.3e-24 117.5 170 44.1
AL3G26440 Arabidopsis lyrata HOM05D007739 ORTHO05D009838 1.6e-24 117.1 168 42.3
BcaB04g18824 Brassica carinata HOM05D007739 ORTHO05D009838 1.6e-24 117.1 175 45.1
C03p46780 Brassica napus HOM05D007739 ORTHO05D009838 1.6e-24 117.1 175 42.9
BolC3t16943H Brassica oleracea HOM05D007739 ORTHO05D009838 1.6e-24 117.1 178 43.3
Carub.0003s1380 Capsella rubella HOM05D007739 ORTHO05D009838 2.8e-24 116.3 171 42.7
A03p38660 Brassica napus HOM05D007739 ORTHO05D009838 3.7e-24 115.9 170 44.7
BraA03t13013Z Brassica rapa HOM05D007739 ORTHO05D009838 3.7e-24 115.9 170 44.7
Rhsim01G0194300 Rhododendron simsii HOM05D007739 ORTHO05D009838 3.7e-24 115.9 179 43.6
THA.LOC104815614 Tarenaya hassleriana HOM05D007739 ORTHO05D009838 4.8e-24 115.5 171 44.4
Dinv36186 Davidia involucrata HOM05D002367 ORTHO05D002566 6.2e-24 115.2 174 43.7
THA.LOC104815612 Tarenaya hassleriana HOM05D007739 ORTHO05D009838 1.1e-23 114.4 171 43.9
AT3G14190 Arabidopsis thaliana HOM05D007739 ORTHO05D009838 2.0e-22 110.2 168 41.7
Migut.D00651 Erythranthe guttata HOM05D007739 ORTHO05D009838 2.1e-19 100.1 189 39.2
CSS0046040 Camellia sinensis var. sinensis HOM05D007739 ORTHO05D009838 4.6e-19 99.0 176 40.9
GSVIVG01037253001 Vitis vinifera HOM05D007739 ORTHO05D009838 4.6e-19 99.0 187 39.6
CARHR089070 Cardamine hirsuta HOM05D007739 ORTHO05D009838 1.3e-18 97.4 175 38.9
CiPaw.14G114800 Carya illinoinensis HOM05D007739 ORTHO05D009838 5.1e-18 95.5 179 38.5
Ca_06221_v3 Cicer arietinum L. HOM05D007739 ORTHO05D009838 6.7e-18 95.1 175 41.7
TAR633G0364 Trochodendron aralioides HOM05D007739 ORTHO05D009838 1.5e-17 94.0 173 38.2
Actinidia11663 Actinidia chinensis HOM05D007739 ORTHO05D009838 1.9e-17 93.6 177 39.0
SalBow6G6289 Salvia bowleyana HOM05D007739 ORTHO05D009838 2.5e-17 93.2 207 36.2
BcaNung07312 Brassica carinata HOM05D007739 ORTHO05D009838 9.6e-17 91.3 162 42.0
C01p50440 Brassica napus HOM05D007739 ORTHO05D009838 3.7e-16 89.4 162 41.4
Peaxi162Scf00469g00320 Petunia axillaris HOM05D007739 ORTHO05D009838 3.7e-16 89.4 171 38.0
PGR119G1777 Punica granatum HOM05D007739 ORTHO05D009838 4.8e-16 89.0 178 38.2
Nitab4.5_0001095g0030 Nicotiana tabacum HOM05D007739 ORTHO05D009838 6.2e-16 88.6 176 38.1
Glyma.02G280600 Glycine max HOM05D007739 ORTHO05D009838 1.1e-15 87.8 163 37.4
Phvul.008G200100 Phaseolus vulgaris HOM05D007739 ORTHO05D009838 1.1e-15 87.8 167 37.7
BraA01t03991Z Brassica rapa HOM05D007739 ORTHO05D009838 1.8e-15 87.0 164 42.1
Cfa009840 Carpinus fangiana HOM05D007739 ORTHO05D009838 1.8e-15 87.0 164 37.8
Haze_23208 Corylus avellana HOM05D007739 ORTHO05D009838 2.4e-15 86.7 164 37.8
A01p39500 Brassica napus HOM05D007739 ORTHO05D009838 3.1e-15 86.3 164 41.5
Sc03g0010980 Simmondsia chinensis HOM05D007739 ORTHO05D009838 3.1e-15 86.3 171 37.4
TPR.G19359 Trifolium pratense HOM05D007739 ORTHO05D009838 6.9e-15 85.1 171 38.0
Cpa.g.sc157.69 Carica papaya HOM05D007739 ORTHO05D009838 9.0e-15 84.7 164 37.2
ECA233G0993 Erigeron canadensis HOM05D007739 ORTHO05D009838 1.2e-14 84.3 152 39.5
Glyma.14G034000 Glycine max HOM05D007739 ORTHO05D009838 1.5e-14 84.0 163 39.3
BolC1t04996H Brassica oleracea HOM05D007739 ORTHO05D009838 3.4e-14 82.8 176 38.6
LjContig00049g0023861 Lotus japonicus HOM05D007739 ORTHO05D009838 5.8e-14 82.0 175 37.1
Nitab4.5_0006104g0010 Nicotiana tabacum HOM05D007739 ORTHO05D009838 1.7e-13 80.5 198 34.3
DCAR_002115 Daucus carota HOM05D007739 ORTHO05D009838 5.0e-13 79.0 180 37.2
unitig_578.g16651 Utricularia gibba HOM05D007739 ORTHO05D009838 1.9e-12 77.0 192 37.0
Cc01_g05640 Coffea canephora HOM05D007739 ORTHO05D009838 2.5e-12 76.6 154 40.9
TAR633G2358 Trochodendron aralioides HOM05D007739 ORTHO05D009838 7.1e-12 75.1 166 36.7
Sopen07g027120 Solanum pennellii HOM05D007739 ORTHO05D009838 1.2e-11 74.3 171 37.4
SGA_v2.0_scaffold29G12264 Striga asiatica HOM05D007739 ORTHO05D009838 2.1e-11 73.6 209 31.6
Oeu001493.2 Olea europaea HOM05D007739 ORTHO05D009838 2.7e-11 73.2 198 33.8
VMungo0647G2062 Vigna mungo HOM05D007739 ORTHO05D009838 6.1e-11 72.0 214 30.8
Lsat_1_v5_gn_5_70921 Lactuca sativa HOM05D007739 ORTHO05D009838 1.3e-10 70.9 165 36.4
Potri.009G072000 Populus trichocarpa HOM05D007739 ORTHO05D009838 2.3e-10 70.1 169 34.3
Solyc07g055110.3 Solanum lycopersicum HOM05D007739 ORTHO05D009838 6.7e-10 68.6 170 35.9
PGSC0003DMG400020420 Solanum tuberosum HOM05D007739 ORTHO05D009838 1.1e-09 67.8 171 35.1
Aa31LG8G1440 Aethionema arabicum HOM05D007739 ORTHO05D009838 1.5e-09 67.4 86 50.0
MSTRG.21351 Avicennia marina HOM05D007739 ORTHO05D009838 3.3e-09 66.2 195 33.8
BcaC08g44770 Brassica carinata HOM05D007739 ORTHO05D009838 2.8e-08 63.2 104 36.5
C06p23400 Brassica napus HOM05D007739 ORTHO05D009838 2.8e-08 63.2 144 31.9
BolC6t37514H Brassica oleracea HOM05D007739 ORTHO05D009838 2.8e-08 63.2 144 31.9
Actinidia23986 Actinidia chinensis HOM05D006191 ORTHO05D007660 1.5e-06 57.4 68 47.1


User provided reference genes

Program Settings