Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR190180 Cardamine hirsuta HOM05D000456 ORTHO05D000916 1.0e-17 92.4 49 100.0
CARHR190130 Cardamine hirsuta HOM05D000456 ORTHO05D000916 1.0e-09 65.9 48 79.2
CARHR190140 Cardamine hirsuta HOM05D000456 ORTHO05D000916 1.3e-09 65.5 48 79.2
Thhalv10004897m.g Eutrema salsugineum HOM05D000456 ORTHO05D000916 1.9e-08 61.6 48 75.0
Thhalv10004905m.g Eutrema salsugineum HOM05D000456 ORTHO05D000916 2.5e-08 61.2 46 76.1
Carub.0006s2114 Capsella rubella HOM05D000456 ORTHO05D000916 9.5e-08 59.3 43 65.1
Carub.0006s2113 Capsella rubella HOM05D000456 ORTHO05D000916 1.2e-07 58.9 44 70.5
AL6G34610 Arabidopsis lyrata HOM05D000456 ORTHO05D000916 2.1e-07 58.2 44 77.3
A06p34300 Brassica napus HOM05D000456 ORTHO05D000916 2.8e-07 57.8 46 69.6
C07p44200 Brassica napus HOM05D000456 ORTHO05D000916 2.8e-07 57.8 46 71.7
BolC7t44944H Brassica oleracea HOM05D000456 ORTHO05D000916 2.8e-07 57.8 46 71.7
BraA06t26362Z Brassica rapa HOM05D000456 ORTHO05D000916 2.8e-07 57.8 46 69.6
Carub.0006s2115 Capsella rubella HOM05D000456 ORTHO05D000916 4.7e-07 57.0 41 73.2
Sp2g23800 Schrenkiella parvula HOM05D000456 ORTHO05D000916 4.7e-07 57.0 46 69.6
AT5G23360 Arabidopsis thaliana HOM05D000456 ORTHO05D000916 6.2e-07 56.6 47 72.3
BcaNung03725 Brassica carinata HOM05D000456 ORTHO05D000916 6.2e-07 56.6 46 69.6
A02p40990 Brassica napus HOM05D000456 ORTHO05D000916 6.2e-07 56.6 46 69.6
C07p44180 Brassica napus HOM05D000456 ORTHO05D000916 6.2e-07 56.6 46 69.6
BolC7t44942H Brassica oleracea HOM05D000456 ORTHO05D000916 6.2e-07 56.6 46 69.6
BraA02t09047Z Brassica rapa HOM05D000456 ORTHO05D000916 6.2e-07 56.6 46 69.6
AL6G34630 Arabidopsis lyrata HOM05D000456 ORTHO05D000916 8.1e-07 56.2 44 72.7
AT5G23370 Arabidopsis thaliana HOM05D000456 ORTHO05D000916 8.1e-07 56.2 44 75.0
BcaB07g29859 Brassica carinata HOM05D000456 ORTHO05D000916 8.1e-07 56.2 46 69.6
BcaC03g18026 Brassica carinata HOM05D000456 ORTHO05D000916 8.1e-07 56.2 46 69.6
A06p34290 Brassica napus HOM05D000456 ORTHO05D000916 8.1e-07 56.2 46 69.6
C02p60880 Brassica napus HOM05D000456 ORTHO05D000916 8.1e-07 56.2 46 69.6
A06p34350 Brassica napus HOM05D000456 ORTHO05D000916 1.1e-06 55.8 46 71.7
BraA06t26365Z Brassica rapa HOM05D000456 ORTHO05D000916 1.1e-06 55.8 46 71.7
BcaNung03724 Brassica carinata HOM05D000456 ORTHO05D000916 4.0e-06 53.9 46 65.2
A06p34320 Brassica napus HOM05D000456 ORTHO05D000916 4.0e-06 53.9 46 65.2
C07p44210 Brassica napus HOM05D000456 ORTHO05D000916 4.0e-06 53.9 46 65.2
BolC7t44945H Brassica oleracea HOM05D000456 ORTHO05D000916 4.0e-06 53.9 46 65.2
BolC7t44946H Brassica oleracea HOM05D000456 ORTHO05D000916 4.0e-06 53.9 46 65.2
BcaNung03723 Brassica carinata HOM05D000456 ORTHO05D000916 5.2e-06 53.5 46 67.4
A02p41000 Brassica napus HOM05D000456 ORTHO05D000916 5.2e-06 53.5 46 69.6
C07p44220 Brassica napus HOM05D000456 ORTHO05D000916 5.2e-06 53.5 46 67.4
BolC7t44947H Brassica oleracea HOM05D000456 ORTHO05D000916 5.2e-06 53.5 46 67.4
Thhalv10014408m.g Eutrema salsugineum HOM05D000456 ORTHO05D000916 6.8e-06 53.1 48 60.4
BraA06t26361Z Brassica rapa HOM05D000456 ORTHO05D000916 8.9e-06 52.8 46 67.4


User provided reference genes

Program Settings