Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR187330 Cardamine hirsuta HOM05D008373 ORTHO05D010873 4.9e-90 334.3 156 100.0
AT5G26050 Arabidopsis thaliana HOM05D008373 ORTHO05D010873 1.2e-72 276.6 161 79.5
BcaNung03984 Brassica carinata HOM05D008373 ORTHO05D010873 2.7e-72 275.4 158 80.4
Thhalv10005364m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 1.7e-71 272.7 163 78.5
A06p36550 Brassica napus HOM05D008373 ORTHO05D010873 3.9e-71 271.6 158 80.4
BraA06t26581Z Brassica rapa HOM05D008373 ORTHO05D010873 3.9e-71 271.6 158 80.4
BolC7t44724H Brassica oleracea HOM05D008373 ORTHO05D010873 2.5e-70 268.9 158 79.7
Carub.0006s2381 Capsella rubella HOM05D008373 ORTHO05D010873 3.3e-70 268.5 158 79.1
C07p41930 Brassica napus HOM05D008373 ORTHO05D010873 9.6e-70 266.9 158 78.5
AL6G38040 Arabidopsis lyrata HOM05D008373 ORTHO05D010873 1.6e-69 266.2 161 77.6
BraA02t08883Z Brassica rapa HOM05D008373 ORTHO05D010873 8.1e-69 263.8 158 74.1
BraA09t36244Z Brassica rapa HOM05D008373 ORTHO05D010873 5.8e-67 257.7 158 75.9
Sp2g21670 Schrenkiella parvula HOM05D008373 ORTHO05D010873 5.8e-67 257.7 158 74.7
A09p06020 Brassica napus HOM05D008373 ORTHO05D010873 7.6e-67 257.3 158 75.9
BcaC04g23598 Brassica carinata HOM05D008373 ORTHO05D010873 9.9e-67 256.9 158 75.3
C09p06580 Brassica napus HOM05D008373 ORTHO05D010873 9.9e-67 256.9 158 75.3
BolC9t53584H Brassica oleracea HOM05D008373 ORTHO05D010873 9.9e-67 256.9 158 75.3
A02p39180 Brassica napus HOM05D008373 ORTHO05D010873 1.3e-66 256.5 144 77.1
BcaB04g19754 Brassica carinata HOM05D008373 ORTHO05D010873 2.9e-66 255.4 158 76.6
Thhalv10015698m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 1.2e-56 223.4 148 68.9
THA.LOC104811242 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 1.1e-49 200.3 160 60.6
BcaC03g17838 Brassica carinata HOM05D000073 ORTHO05D008214 5.6e-46 188.0 141 61.0
C02p58780 Brassica napus HOM05D008373 ORTHO05D010873 2.1e-45 186.0 115 73.0
BolC2t11937H Brassica oleracea HOM05D008373 ORTHO05D010873 4.5e-43 178.3 116 71.6
Aa31LG3G15380 Aethionema arabicum HOM05D008373 ORTHO05D010873 1.1e-33 147.1 133 51.1
CARHR187310 Cardamine hirsuta HOM05D008373 ORTHO05D010873 1.1e-33 147.1 79 84.8
THA.LOC104811315 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 3.7e-29 132.1 158 46.2
A02p01220 Brassica napus HOM05D008373 ORTHO05D010873 2.2e-26 122.9 143 42.0
BraA02t05101Z Brassica rapa HOM05D008373 ORTHO05D010873 2.2e-26 122.9 143 42.0
BolC2t06488H Brassica oleracea HOM05D008373 ORTHO05D010873 4.2e-25 118.6 143 40.6
BcaC03g13394 Brassica carinata HOM05D008373 ORTHO05D010873 5.5e-25 118.2 143 40.6
C02p05400 Brassica napus HOM05D008373 ORTHO05D010873 7.2e-25 117.9 144 41.0
BcaNung02651 Brassica carinata HOM05D008373 ORTHO05D010873 1.2e-24 117.1 143 38.5
A10p25930 Brassica napus HOM05D008373 ORTHO05D010873 2.0e-22 109.8 144 40.3
BolC9t59329H Brassica oleracea HOM05D008373 ORTHO05D010873 2.6e-22 109.4 144 39.6
C09p65010 Brassica napus HOM05D008373 ORTHO05D010873 4.4e-22 108.6 144 39.6
AL6G22570 Arabidopsis lyrata HOM05D008373 ORTHO05D010873 9.7e-22 107.5 144 38.9
BcaC04g19192 Brassica carinata HOM05D008373 ORTHO05D010873 9.7e-22 107.5 144 38.9
THA.LOC104811314 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 1.3e-21 107.1 154 41.6
Sp6g31780 Schrenkiella parvula HOM05D008373 ORTHO05D010873 1.7e-21 106.7 146 37.0
Thhalv10015656m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 2.2e-21 106.3 156 39.7
Carub.0006s1035 Capsella rubella HOM05D008373 ORTHO05D010873 2.8e-21 105.9 144 39.6
BraA10t44655Z Brassica rapa HOM05D008373 ORTHO05D010873 1.4e-20 103.6 149 38.3
AT5G11820 Arabidopsis thaliana HOM05D008373 ORTHO05D010873 1.8e-20 103.2 144 37.5
THA.LOC104811243 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 1.8e-20 103.2 147 38.1
CARHR201340 Cardamine hirsuta HOM05D008373 ORTHO05D010873 7.0e-20 101.3 144 35.4
C07p41920 Brassica napus HOM05D008373 ORTHO05D015254 6.3e-13 78.2 153 34.0
Thhalv10005065m.g Eutrema salsugineum HOM05D008373 ORTHO05D015254 6.3e-13 78.2 154 32.5
THA.LOC104799169 Tarenaya hassleriana HOM05D008373 ORTHO05D015254 6.3e-13 78.2 129 31.8
A06p36560 Brassica napus HOM05D008373 ORTHO05D015254 8.2e-13 77.8 153 34.0
BolC7t44722H Brassica oleracea HOM05D008373 ORTHO05D015254 8.2e-13 77.8 153 34.0
BraA06t26582Z Brassica rapa HOM05D008373 ORTHO05D015254 8.2e-13 77.8 153 34.0
Aa31LG11G5030 Aethionema arabicum HOM05D008373 ORTHO05D015254 1.1e-12 77.4 107 37.4
BcaNung03983 Brassica carinata HOM05D008373 ORTHO05D015254 2.4e-12 76.3 153 33.3
AL6G38050 Arabidopsis lyrata HOM05D008373 ORTHO05D015254 3.1e-12 75.9 153 30.7
CARHR187340 Cardamine hirsuta HOM05D008373 ORTHO05D015254 1.6e-11 73.6 153 32.7
AT5G26060 Arabidopsis thaliana HOM05D008373 ORTHO05D015254 4.5e-11 72.0 135 32.6
Carub.0006s2382 Capsella rubella HOM05D008373 ORTHO05D015254 1.0e-10 70.9 135 34.8
CsaV3_7G025520 Cucumis sativus L. HOM05D000256 ORTHO05D000119 2.3e-07 59.7 112 33.9
MELO3C024156.2 Cucumis melo HOM05D000256 ORTHO05D000119 1.2e-06 57.4 112 33.0
PSO675G7596 Papaver somniferum HOM05D000256 ORTHO05D000119 2.6e-06 56.2 119 31.9


User provided reference genes

Program Settings