Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR186470 Cardamine hirsuta HOM05D012757 ORTHO05D010927 2.9e-75 285.4 173 100.0
Carub.0006s2463 Capsella rubella HOM05D012757 ORTHO05D010927 2.7e-41 172.6 166 59.6
Thhalv10005673m.g Eutrema salsugineum HOM05D012757 ORTHO05D010927 4.6e-41 171.8 181 65.2
AT5G27020 Arabidopsis thaliana HOM05D012757 ORTHO05D010927 8.2e-38 161.0 173 59.5
BraA09t36196Z Brassica rapa HOM05D012757 ORTHO05D010927 2.5e-34 149.4 174 60.3
BcaB04g19697 Brassica carinata HOM05D012757 ORTHO05D010927 9.4e-34 147.5 168 57.7
A09p05550 Brassica napus HOM05D012757 ORTHO05D010927 9.4e-34 147.5 174 59.8
BcaC04g23659 Brassica carinata HOM05D012757 ORTHO05D010927 6.1e-33 144.8 174 55.2
C09p06040 Brassica napus HOM05D012757 ORTHO05D010927 6.1e-33 144.8 174 55.2
BolC9t53529H Brassica oleracea HOM05D012757 ORTHO05D010927 6.1e-33 144.8 174 55.2
Carub.0006s2524 Capsella rubella HOM05D012757 ORTHO05D010927 1.9e-26 123.2 118 57.6
THA.LOC104820098 Tarenaya hassleriana HOM05D012757 ORTHO05D010927 5.2e-16 88.6 186 37.6
THA.LOC104802786 Tarenaya hassleriana HOM05D012757 ORTHO05D010927 7.7e-12 74.7 177 36.2
Sabra05G0027500 Salix brachista HOM05D015247 ORTHO05D010927 3.2e-10 69.3 36 83.3
Potri.005G021500 Populus trichocarpa HOM05D015247 ORTHO05D010927 9.4e-10 67.8 34 85.3
Rhsim05G0136000 Rhododendron simsii HOM05D010455 ORTHO05D010927 1.6e-09 67.0 188 29.3
Sabra13G0010500 Salix brachista HOM05D015247 ORTHO05D010927 1.6e-09 67.0 34 82.4
Dinv24410 Davidia involucrata HOM05D010455 ORTHO05D010927 2.7e-09 66.2 34 79.4
Lalb_Chr02g0148001 Lupinus albus HOM05D014479 ORTHO05D010927 3.6e-09 65.9 36 75.0
CSS0003559 Camellia sinensis var. sinensis HOM05D010455 ORTHO05D010927 4.7e-09 65.5 34 76.5
CSS0040289 Camellia sinensis var. sinensis HOM05D010455 ORTHO05D010927 4.7e-09 65.5 34 76.5
Migut.B01004 Erythranthe guttata HOM05D010455 ORTHO05D010927 6.1e-09 65.1 35 74.3
Peaxi162Scf00037g00185 Petunia axillaris HOM05D010455 ORTHO05D010927 8.0e-09 64.7 35 77.1
Lsat_1_v5_gn_9_124561 Lactuca sativa HOM05D010455 ORTHO05D010927 3.0e-08 62.8 36 69.4
Nitab4.5_0001971g0050 Nicotiana tabacum HOM05D010455 ORTHO05D010927 4.0e-08 62.4 35 74.3
unitig_42.g32309 Utricularia gibba HOM05D010455 ORTHO05D010927 4.0e-08 62.4 34 73.5
unitig_899.g14744 Utricularia gibba HOM05D010455 ORTHO05D010927 4.0e-08 62.4 34 73.5
Actinidia19768 Actinidia chinensis HOM05D010455 ORTHO05D010927 6.8e-08 61.6 178 29.2
Ciclev10003158m.g Citrus clementina HOM05D015247 ORTHO05D010927 6.8e-08 61.6 35 71.4
Nitab4.5_0002612g0010 Nicotiana tabacum HOM05D010455 ORTHO05D010927 8.8e-08 61.2 35 71.4
Manes.09G174200 Manihot esculenta HOM05D010455 ORTHO05D010927 2.0e-07 60.1 33 75.8
ECA236G1914 Erigeron canadensis HOM05D000101 ORTHO05D000089 2.6e-07 59.7 34 64.7
Solyc01g100070.3 Solanum lycopersicum HOM05D010455 ORTHO05D010927 2.6e-07 59.7 35 71.4
PGSC0003DMG400024774 Solanum tuberosum HOM05D010455 ORTHO05D010927 2.6e-07 59.7 35 71.4
Duzib177G0175 Durio zibethinus HOM05D016798 ORTHO05D016261 3.4e-07 59.3 35 60.0
Cpa.g.sc48.126 Carica papaya HOM05D010455 ORTHO05D010927 7.5e-07 58.2 170 30.0
Sopen01g043600 Solanum pennellii HOM05D010455 ORTHO05D010927 1.7e-06 57.0 35 68.6
Prupe.6G317300 Prunus persica HOM05D010455 ORTHO05D010927 3.7e-06 55.8 36 61.1


User provided reference genes

Program Settings