Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR184030 Cardamine hirsuta HOM05D007592 ORTHO05D004645 5.0e-48 194.1 99 100.0
CARHR180790 Cardamine hirsuta HOM05D007592 ORTHO05D004645 5.9e-33 144.1 100 77.0
AL6G36070 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 3.8e-32 141.4 99 72.7
AL1G54420 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 2.5e-31 138.7 99 70.7
AL9U10800 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 1.2e-20 103.2 79 67.1
AL5G14150 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 4.9e-19 97.8 61 78.7
AL8G44460 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 1.6e-17 92.8 68 69.1
AL1G39540 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 2.7e-17 92.0 61 72.1
Oeu029633.1 Olea europaea HOM05D007592 ORTHO05D004645 5.8e-12 74.3 103 43.7
AT1G24380 Arabidopsis thaliana HOM05D007592 ORTHO05D004645 1.3e-11 73.2 106 40.6
AT4G10230 Arabidopsis thaliana HOM05D007592 ORTHO05D004645 1.7e-11 72.8 106 40.6
BolC6t37310H Brassica oleracea HOM05D007592 ORTHO05D004645 2.2e-11 72.4 106 39.6
BraA09t38299Z Brassica rapa HOM05D007592 ORTHO05D004645 2.9e-11 72.0 106 39.6
CANSAT64G2577 Cannabis sativa HOM05D007592 ORTHO05D004645 2.9e-11 72.0 109 45.0
Manes.13G090650 Manihot esculenta HOM05D007592 ORTHO05D004645 3.7e-11 71.6 100 43.0
Atru.chr13.1766 Acer truncatum HOM05D007592 ORTHO05D004645 1.9e-10 69.3 107 40.2
C06p21250 Brassica napus HOM05D007592 ORTHO05D004645 1.9e-10 69.3 106 38.7
CANSAT64G0010 Cannabis sativa HOM05D007592 ORTHO05D004645 2.4e-10 68.9 106 44.3
Ciclev10016612m.g Citrus clementina HOM05D007592 ORTHO05D004645 3.2e-10 68.6 108 38.9
Atru.chr8.1335 Acer truncatum HOM05D007592 ORTHO05D004645 5.4e-10 67.8 100 40.0
Ciclev10033648m.g Citrus clementina HOM05D007592 ORTHO05D004645 7.1e-10 67.4 108 38.9
DCAR_018612 Daucus carota HOM05D007592 ORTHO05D004645 7.1e-10 67.4 106 39.6
CANSAT35G0055 Cannabis sativa HOM05D007592 ORTHO05D004645 9.2e-10 67.0 98 44.9
Ciclev10027215m.g Citrus clementina HOM05D007592 ORTHO05D004645 9.2e-10 67.0 108 38.0
DCAR_001490 Daucus carota HOM05D007592 ORTHO05D004645 2.1e-09 65.9 106 39.6
Manes.03G086209 Manihot esculenta HOM05D007592 ORTHO05D004645 2.7e-09 65.5 64 50.0
Manes.12G071166 Manihot esculenta HOM05D007743 ORTHO05D010219 2.7e-09 65.5 64 50.0
Manes.14G157656 Manihot esculenta HOM05D007743 ORTHO05D010219 3.5e-09 65.1 67 47.8
C04p29390 Brassica napus HOM05D007592 ORTHO05D004645 4.6e-09 64.7 104 37.5
BcaB06g28792 Brassica carinata HOM05D007743 ORTHO05D004645 6.0e-09 64.3 89 44.9
CARHR029530 Cardamine hirsuta HOM05D007592 ORTHO05D004645 1.0e-08 63.5 106 37.7
Manes.04G041320 Manihot esculenta HOM05D007592 ORTHO05D004645 1.0e-08 63.5 100 40.0
CANSAT25G1186 Cannabis sativa HOM05D007592 ORTHO05D004645 1.7e-08 62.8 106 43.4
CARHR258700 Cardamine hirsuta HOM05D007592 ORTHO05D004645 3.9e-08 61.6 111 36.9
Ciclev10023446m.g Citrus clementina HOM05D007592 ORTHO05D004645 3.9e-08 61.6 108 38.0
BcaB04g19609 Brassica carinata HOM05D007743 ORTHO05D004645 5.1e-08 61.2 89 43.8
Ciclev10003711m.g Citrus clementina HOM05D007592 ORTHO05D004645 5.1e-08 61.2 108 37.0
Manes.15G155750 Manihot esculenta HOM05D007743 ORTHO05D010219 6.6e-08 60.8 60 50.0
BraA06t26442Z Brassica rapa HOM05D007592 ORTHO05D004645 1.5e-07 59.7 67 46.3
Manes.09G090928 Manihot esculenta HOM05D007592 ORTHO05D004645 1.9e-07 59.3 64 46.9
Atru.chr10.1040 Acer truncatum HOM05D007592 ORTHO05D004645 2.5e-07 58.9 107 37.4
BcaB08g34421 Brassica carinata HOM05D007743 ORTHO05D004645 3.3e-07 58.5 64 46.9
BcaB01g01748 Brassica carinata HOM05D007743 ORTHO05D004645 5.6e-07 57.8 64 46.9
BcaB07g33427 Brassica carinata HOM05D007743 ORTHO05D004645 5.6e-07 57.8 64 46.9
Ciclev10003950m.g Citrus clementina HOM05D007592 ORTHO05D004645 5.6e-07 57.8 70 42.9
CSS0032344 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 9.5e-07 57.0 95 37.9
Atru.chr3.1033 Acer truncatum HOM05D007592 ORTHO05D004645 8.1e-06 53.9 112 33.0
Atru.chr5.2435 Acer truncatum HOM05D007743 ORTHO05D004645 8.1e-06 53.9 101 37.6
Atru.chr8.1611 Acer truncatum HOM05D007592 ORTHO05D004645 8.1e-06 53.9 99 40.4


User provided reference genes

Program Settings