Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR183640 Cardamine hirsuta HOM05D000214 ORTHO05D000131 2.3e-31 138.3 69 100.0
CARHR055700 Cardamine hirsuta HOM05D000214 ORTHO05D000131 1.5e-14 82.4 69 60.9
Atru.chr13.1768 Acer truncatum HOM05D000214 ORTHO05D000131 1.3e-13 79.3 76 55.3
AT3G22935 Arabidopsis thaliana HOM05D000214 ORTHO05D000131 4.8e-13 77.4 72 59.7
Atru.chr6.861 Acer truncatum HOM05D000214 ORTHO05D000131 1.8e-12 75.5 75 56.0
CANSAT64G0191 Cannabis sativa HOM05D000214 ORTHO05D000131 2.4e-12 75.1 76 52.6
CANSAT78G2008 Cannabis sativa HOM05D000214 ORTHO05D000131 2.4e-12 75.1 76 52.6
Atru.chr11.100 Acer truncatum HOM05D000214 ORTHO05D000131 5.3e-12 73.9 75 54.7
Atru.chr11.447 Acer truncatum HOM05D000214 ORTHO05D000131 5.3e-12 73.9 75 54.7
AT2G13770 Arabidopsis thaliana HOM05D000214 ORTHO05D000131 1.5e-11 72.4 69 53.6
Atru.chr11.1167 Acer truncatum HOM05D000214 ORTHO05D000131 3.4e-11 71.2 75 53.3
Atru.chr5.2879 Acer truncatum HOM05D000214 ORTHO05D000131 4.5e-11 70.9 76 51.3
CARHR258710 Cardamine hirsuta HOM05D000214 ORTHO05D000131 5.8e-11 70.5 76 51.3
CANSAT35G1106 Cannabis sativa HOM05D000214 ORTHO05D000131 7.6e-11 70.1 74 51.4
COL.COLO4_35650 Corchorus olitorius HOM05D000214 ORTHO05D000131 1.3e-10 69.3 76 50.0
CANSAT01G2145 Cannabis sativa HOM05D000214 ORTHO05D000131 2.2e-10 68.6 76 48.7
Atru.chr1.504 Acer truncatum HOM05D000214 ORTHO05D000131 1.9e-09 65.5 73 50.7
Atru.chr8.365 Acer truncatum HOM05D000214 ORTHO05D000131 3.2e-09 64.7 75 49.3
Atru.chr12.1070 Acer truncatum HOM05D000214 ORTHO05D000131 5.4e-09 63.9 75 46.7
Ciclev10017509m.g Citrus clementina HOM05D000214 ORTHO05D000131 5.4e-09 63.9 75 48.0
Atru.chr10.189 Acer truncatum HOM05D000214 ORTHO05D000131 7.1e-09 63.5 76 48.7
COL.COLO4_33403 Corchorus olitorius HOM05D000214 ORTHO05D000131 7.1e-09 63.5 76 48.7
Oeu064191.1 Olea europaea HOM05D000214 ORTHO05D000131 1.6e-08 62.4 76 48.7
Atru.chr4.226 Acer truncatum HOM05D000214 ORTHO05D000131 3.5e-08 61.2 72 50.0
RcHm_v2.0_Chr4g0404131 Rosa chinensis HOM05D000214 ORTHO05D000131 4.6e-08 60.8 76 46.1
Oeu033031.1 Olea europaea HOM05D000214 ORTHO05D000131 2.3e-07 58.5 76 47.4
Atru.chr2.2106 Acer truncatum HOM05D000214 ORTHO05D000131 3.0e-07 58.2 55 56.4
CSS0009917 Camellia sinensis var. sinensis HOM05D000214 ORTHO05D000131 3.0e-07 58.2 77 42.9
COL.COLO4_32186 Corchorus olitorius HOM05D000214 ORTHO05D000131 3.0e-07 58.2 76 46.1
Atru.chr4.772 Acer truncatum HOM05D000214 ORTHO05D000131 1.1e-06 56.2 64 51.6
Atru.chr12.1927 Acer truncatum HOM05D000214 ORTHO05D000131 2.5e-06 55.1 60 53.3
Atru.chr12.1935 Acer truncatum HOM05D000214 ORTHO05D000131 2.5e-06 55.1 60 53.3
Atru.chr3.1638 Acer truncatum HOM05D000214 ORTHO05D000131 5.6e-06 53.9 73 45.2


User provided reference genes

Program Settings