Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR182400 Cardamine hirsuta HOM05D001334 ORTHO05D001119 6.5e-28 126.7 66 100.0
CARHR137360 Cardamine hirsuta HOM05D001334 ORTHO05D001119 5.0e-12 73.9 53 77.4
Sp4g24490 Schrenkiella parvula HOM05D001334 ORTHO05D001119 3.3e-11 71.2 53 73.6
BcaB06g29237 Brassica carinata HOM05D001334 ORTHO05D001119 7.3e-11 70.1 53 73.6
BcaC02g07245 Brassica carinata HOM05D001334 ORTHO05D001119 7.3e-11 70.1 53 73.6
BcaC02g07249 Brassica carinata HOM05D001334 ORTHO05D001119 7.3e-11 70.1 53 73.6
A04p32140 Brassica napus HOM05D001334 ORTHO05D001119 7.3e-11 70.1 53 73.6
C04p69630 Brassica napus HOM05D001334 ORTHO05D001119 7.3e-11 70.1 53 73.6
BolC4t28462H Brassica oleracea HOM05D001334 ORTHO05D001119 7.3e-11 70.1 53 73.6
BraA04t18668Z Brassica rapa HOM05D001334 ORTHO05D001119 7.3e-11 70.1 53 73.6
AT2G42320 Arabidopsis thaliana HOM05D001334 ORTHO05D001119 9.5e-11 69.7 53 73.6
AL4G40680 Arabidopsis lyrata HOM05D001334 ORTHO05D001119 1.6e-10 68.9 53 71.7
Thhalv10016357m.g Eutrema salsugineum HOM05D001334 ORTHO05D001119 6.1e-10 67.0 53 69.8
C04p03450 Brassica napus HOM05D001334 ORTHO05D001119 8.0e-10 66.6 56 60.7
Carub.0004s2466 Capsella rubella HOM05D001334 ORTHO05D001119 8.0e-10 66.6 53 67.9
BcaC02g12475 Brassica carinata HOM05D001334 ORTHO05D001119 1.0e-09 66.2 56 60.7
BolC4t21981H Brassica oleracea HOM05D001334 ORTHO05D001119 1.0e-09 66.2 56 60.7
BcaNung04396 Brassica carinata HOM05D001334 ORTHO05D001119 1.5e-08 62.4 56 57.1
A05p02840 Brassica napus HOM05D001334 ORTHO05D001119 9.8e-08 59.7 51 58.8
BraA05t19276Z Brassica rapa HOM05D001334 ORTHO05D001119 9.8e-08 59.7 51 58.8
Aa31LG1G23930 Aethionema arabicum HOM05D001334 ORTHO05D001119 1.9e-06 55.5 43 62.8
Aa31LG1G23970 Aethionema arabicum HOM05D001334 ORTHO05D001119 1.9e-06 55.5 43 62.8


User provided reference genes

Program Settings