Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR182200 Cardamine hirsuta HOM05D000311 ORTHO05D000183 3.5e-29 131.0 67 100.0
AL1G17310 Arabidopsis lyrata HOM05D000311 ORTHO05D000183 1.2e-13 79.3 60 68.3
BraA09t41984Z Brassica rapa HOM05D000311 ORTHO05D000183 9.6e-11 69.7 58 67.2
BcaC07g42006 Brassica carinata HOM05D000311 ORTHO05D000183 1.3e-10 69.3 58 65.5
A09p66460 Brassica napus HOM05D000311 ORTHO05D000183 1.3e-10 69.3 61 60.7
BolC8t52591H Brassica oleracea HOM05D000311 ORTHO05D000183 1.3e-10 69.3 58 65.5
BolC6t39868H Brassica oleracea HOM05D000311 ORTHO05D000183 1.6e-10 68.9 61 52.5
BcaC08g46822 Brassica carinata HOM05D000311 ORTHO05D000183 2.1e-10 68.6 54 59.3
A07p40040 Brassica napus HOM05D000311 ORTHO05D000183 2.1e-10 68.6 54 59.3
Carub.0001s0669 Capsella rubella HOM05D000311 ORTHO05D000183 3.7e-10 67.8 51 68.6
Sp1g06140 Schrenkiella parvula HOM05D000311 ORTHO05D000183 3.7e-10 67.8 51 66.7
AL1G17550 Arabidopsis lyrata HOM05D000311 ORTHO05D000183 6.2e-10 67.0 51 64.7
CARHR006900 Cardamine hirsuta HOM05D000311 ORTHO05D000183 1.1e-09 66.2 55 63.6
CARHR007100 Cardamine hirsuta HOM05D000311 ORTHO05D000183 1.1e-09 66.2 51 66.7
BcaC07g42463 Brassica carinata HOM05D000311 ORTHO05D000183 2.4e-09 65.1 54 61.1
BcaC07g42465 Brassica carinata HOM05D000311 ORTHO05D000183 3.1e-09 64.7 54 59.3
C06p33570 Brassica napus HOM05D000311 ORTHO05D000183 3.1e-09 64.7 49 63.3
BolC6t38469H Brassica oleracea HOM05D000311 ORTHO05D000183 3.1e-09 64.7 49 63.3
AL1G17540 Arabidopsis lyrata HOM05D000311 ORTHO05D000183 4.0e-09 64.3 52 65.4
BcaC05g24568 Brassica carinata HOM05D000311 ORTHO05D000183 4.0e-09 64.3 65 52.3
AT1G07390 Arabidopsis thaliana HOM05D000311 ORTHO05D000183 9.0e-09 63.2 50 62.0
BcaC07g42004 Brassica carinata HOM05D000311 ORTHO05D000183 9.0e-09 63.2 61 55.7
C08p50630 Brassica napus HOM05D000311 ORTHO05D000183 9.0e-09 63.2 56 60.7
BcaC08g45603 Brassica carinata HOM05D000311 ORTHO05D000183 2.6e-08 61.6 57 57.9
C06p33540 Brassica napus HOM05D000311 ORTHO05D000183 2.6e-08 61.6 56 57.1
BolC6t38467H Brassica oleracea HOM05D000311 ORTHO05D000183 7.6e-08 60.1 56 55.4
C02p31700 Brassica napus HOM05D000311 ORTHO05D000183 1.0e-07 59.7 58 53.4
C06p33490 Brassica napus HOM05D000311 ORTHO05D000183 1.0e-07 59.7 57 56.1
Carub.0004s0513 Capsella rubella HOM05D000311 ORTHO05D000183 1.0e-07 59.7 54 53.7
BcaC03g15487 Brassica carinata HOM05D000311 ORTHO05D000183 1.3e-07 59.3 48 58.3
BcaC08g46852 Brassica carinata HOM05D000311 ORTHO05D000183 1.3e-07 59.3 54 57.4
CARHR067460 Cardamine hirsuta HOM05D000311 ORTHO05D000183 1.3e-07 59.3 51 60.8
Thhalv10018087m.g Eutrema salsugineum HOM05D000311 ORTHO05D000183 1.3e-07 59.3 64 48.4
AL2G34080 Arabidopsis lyrata HOM05D000311 ORTHO05D000183 1.7e-07 58.9 54 57.4
BcaB05g24838 Brassica carinata HOM05D000311 ORTHO05D000183 1.7e-07 58.9 54 53.7
C02p31680 Brassica napus HOM05D000311 ORTHO05D000183 1.7e-07 58.9 53 52.8
CARHR067410 Cardamine hirsuta HOM05D000311 ORTHO05D000183 1.7e-07 58.9 61 50.8
CARHR067450 Cardamine hirsuta HOM05D000311 ORTHO05D000183 1.7e-07 58.9 61 50.8
BcaC08g45607 Brassica carinata HOM05D000311 ORTHO05D000183 2.2e-07 58.5 51 52.9
Thhalv10018074m.g Eutrema salsugineum HOM05D000311 ORTHO05D000183 2.2e-07 58.5 54 57.4
AT1G74190 Arabidopsis thaliana HOM05D000311 ORTHO05D000183 2.9e-07 58.2 54 53.7
A07p40030 Brassica napus HOM05D000311 ORTHO05D000183 2.9e-07 58.2 54 57.4
BraA07t30499Z Brassica rapa HOM05D000311 ORTHO05D000183 2.9e-07 58.2 53 52.8
Carub.0002s0936 Capsella rubella HOM05D000311 ORTHO05D000183 2.9e-07 58.2 50 60.0
Carub.0004s0515 Capsella rubella HOM05D000311 ORTHO05D000183 2.9e-07 58.2 51 58.8
Thhalv10018093m.g Eutrema salsugineum HOM05D000311 ORTHO05D000183 2.9e-07 58.2 54 55.6
AT1G74170 Arabidopsis thaliana HOM05D000311 ORTHO05D000183 3.8e-07 57.8 54 53.7
BraA02t06964Z Brassica rapa HOM05D000311 ORTHO05D000183 3.8e-07 57.8 57 52.6
CARHR061450 Cardamine hirsuta HOM05D000311 ORTHO05D000183 3.8e-07 57.8 52 53.8
CARHR067390 Cardamine hirsuta HOM05D000311 ORTHO05D000183 3.8e-07 57.8 52 55.8
AL1G64890 Arabidopsis lyrata HOM05D000311 ORTHO05D000183 4.9e-07 57.4 49 55.1
AT5G49290 Arabidopsis thaliana HOM05D000311 ORTHO05D000183 4.9e-07 57.4 53 54.7
BcaB03g15370 Brassica carinata HOM05D000311 ORTHO05D000183 4.9e-07 57.4 54 51.9
BraA07t30591Z Brassica rapa HOM05D000311 ORTHO05D000183 4.9e-07 57.4 52 51.9
Carub.0002s1339 Capsella rubella HOM05D000311 ORTHO05D000183 4.9e-07 57.4 52 55.8
AT1G58190 Arabidopsis thaliana HOM05D000311 ORTHO05D000183 6.5e-07 57.0 56 50.0
BcaB05g24841 Brassica carinata HOM05D000311 ORTHO05D000183 6.5e-07 57.0 52 55.8
A06p14740 Brassica napus HOM05D000311 ORTHO05D000183 6.5e-07 57.0 51 52.9
C02p31770 Brassica napus HOM05D000311 ORTHO05D000183 6.5e-07 57.0 59 49.2
BolC2t09204H Brassica oleracea HOM05D000094 ORTHO05D003883 6.5e-07 57.0 58 50.0
BolC4t26761H Brassica oleracea HOM05D000311 ORTHO05D000183 6.5e-07 57.0 52 55.8
BraA06t24597Z Brassica rapa HOM05D000311 ORTHO05D000183 6.5e-07 57.0 51 52.9
CARHR067350 Cardamine hirsuta HOM05D000311 ORTHO05D000183 6.5e-07 57.0 53 54.7
AL4G16880 Arabidopsis lyrata HOM05D000311 ORTHO05D000183 8.4e-07 56.6 58 46.6
A04p19700 Brassica napus HOM05D000311 ORTHO05D000183 8.4e-07 56.6 54 51.9
C04p51900 Brassica napus HOM05D000311 ORTHO05D000183 8.4e-07 56.6 52 55.8
C04p55350 Brassica napus HOM05D000311 ORTHO05D000183 8.4e-07 56.6 54 51.9
C06p48310 Brassica napus HOM05D000311 ORTHO05D000183 8.4e-07 56.6 53 50.9
C06p48370 Brassica napus HOM05D000311 ORTHO05D000183 8.4e-07 56.6 54 53.7
BolC4t27071H Brassica oleracea HOM05D000311 ORTHO05D000183 8.4e-07 56.6 54 51.9
BraA04t17560Z Brassica rapa HOM05D000311 ORTHO05D000183 8.4e-07 56.6 54 51.9
BraA07t31544Z Brassica rapa HOM05D000311 ORTHO05D000183 8.4e-07 56.6 54 53.7
CARHR067560 Cardamine hirsuta HOM05D000311 ORTHO05D000183 8.4e-07 56.6 43 67.4
BcaB07g31881 Brassica carinata HOM05D000311 ORTHO05D000183 1.4e-06 55.8 51 52.9
A02p19140 Brassica napus HOM05D000311 ORTHO05D000183 1.9e-06 55.5 52 55.8
BcaC08g46821 Brassica carinata HOM05D000311 ORTHO05D000183 2.5e-06 55.1 54 51.9
C06p48340 Brassica napus HOM05D000311 ORTHO05D000183 2.5e-06 55.1 54 51.9
BcaC08g45538 Brassica carinata HOM05D000311 ORTHO05D000183 3.2e-06 54.7 53 50.9
C06p32150 Brassica napus HOM05D000311 ORTHO05D000183 3.2e-06 54.7 53 50.9
BolC6t38339H Brassica oleracea HOM05D000311 ORTHO05D000183 3.2e-06 54.7 53 50.9
CARHR019250 Cardamine hirsuta HOM05D000311 ORTHO05D000183 4.2e-06 54.3 51 54.9
Manes.11G060199 Manihot esculenta HOM05D000311 ORTHO05D000183 4.2e-06 54.3 58 43.1
AT2G25470 Arabidopsis thaliana HOM05D000311 ORTHO05D000183 5.5e-06 53.9 58 46.6
C06p38520 Brassica napus HOM05D000311 ORTHO05D000183 5.5e-06 53.9 48 52.1
BraA02t06962Z Brassica rapa HOM05D000311 ORTHO05D000183 5.5e-06 53.9 52 53.8
Carub.0002s0642 Capsella rubella HOM05D000311 ORTHO05D000183 5.5e-06 53.9 51 56.9
CARHR220400 Cardamine hirsuta HOM05D000311 ORTHO05D000183 5.5e-06 53.9 51 54.9
AT1G54470 Arabidopsis thaliana HOM05D000311 ORTHO05D000183 7.1e-06 53.5 52 53.8
BraA04t17523Z Brassica rapa HOM05D000022 ORTHO05D000183 7.1e-06 53.5 58 51.7
CARHR053860 Cardamine hirsuta HOM05D000311 ORTHO05D000183 7.1e-06 53.5 56 51.8
CARHR053850 Cardamine hirsuta HOM05D000311 ORTHO05D000183 9.3e-06 53.1 54 55.6
Dinv30629 Davidia involucrata HOM05D000311 ORTHO05D000183 9.3e-06 53.1 49 53.1


User provided reference genes

Program Settings