Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR180470 Cardamine hirsuta HOM05D007540 ORTHO05D009531 8.7e-50 199.9 94 100.0
Carub.0003s1043 Capsella rubella HOM05D007540 ORTHO05D009531 2.6e-30 135.2 94 67.0
Carub.0007s3246 Capsella rubella HOM05D007540 ORTHO05D009531 2.6e-30 135.2 94 66.0
CANSAT35G1587 Cannabis sativa HOM05D007540 ORTHO05D009531 4.5e-30 134.4 96 65.6
Carub.0005s0981 Capsella rubella HOM05D007540 ORTHO05D009531 1.7e-29 132.5 83 74.7
Carub.0003s3276 Capsella rubella HOM05D007540 ORTHO05D009531 2.2e-29 132.1 95 65.3
CARHR180370 Cardamine hirsuta HOM05D007540 ORTHO05D009531 2.2e-29 132.1 78 83.3
Carub.0003s3277 Capsella rubella HOM05D007540 ORTHO05D009531 2.9e-29 131.7 95 64.2
Carub.0004s0563 Capsella rubella HOM05D007540 ORTHO05D009531 2.9e-29 131.7 95 65.3
Carub.0007s3754 Capsella rubella HOM05D007540 ORTHO05D009531 6.4e-29 130.6 93 65.6
Carub.0002s0328 Capsella rubella HOM05D007540 ORTHO05D009531 1.9e-28 129.0 91 62.6
Carub.0002s0833 Capsella rubella HOM05D007540 ORTHO05D009531 2.5e-28 128.6 94 63.8
CARHR292600 Cardamine hirsuta HOM05D007540 ORTHO05D009531 3.2e-28 128.3 88 72.7
Carub.0003s3278 Capsella rubella HOM05D007540 ORTHO05D009531 5.5e-28 127.5 95 64.2
CANSAT25G2830 Cannabis sativa HOM05D007540 ORTHO05D009531 7.1e-28 127.1 92 65.2
Carub.0005s1237 Capsella rubella HOM05D007540 ORTHO05D009531 7.1e-28 127.1 95 63.2
Carub.0007s3751 Capsella rubella HOM05D007540 ORTHO05D009531 7.1e-28 127.1 95 64.2
AT1G66100 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 9.3e-28 126.7 95 66.3
Carub.0007s3755 Capsella rubella HOM05D007540 ORTHO05D009531 1.6e-27 125.9 82 70.7
Carub.0007s3749 Capsella rubella HOM05D007540 ORTHO05D009531 2.7e-27 125.2 95 64.2
Carub.0007s3748 Capsella rubella HOM05D007540 ORTHO05D009531 6.0e-27 124.0 95 62.1
CANSAT25G1121 Cannabis sativa HOM05D007540 ORTHO05D009531 7.9e-27 123.6 92 63.0
CANSAT25G0386 Cannabis sativa HOM05D007540 ORTHO05D009531 1.0e-26 123.2 92 64.1
Carub.0003s3275 Capsella rubella HOM05D007540 ORTHO05D009531 2.3e-26 122.1 95 58.9
SalBow5G1295 Salvia bowleyana HOM05D007540 ORTHO05D009531 6.7e-26 120.6 90 60.0
CANSAT25G3055 Cannabis sativa HOM05D007540 ORTHO05D009531 8.7e-26 120.2 93 62.4
BcaB01g02546 Brassica carinata HOM05D007540 ORTHO05D009531 1.1e-25 119.8 94 61.7
Carub.0001s3826 Capsella rubella HOM05D007540 ORTHO05D009531 1.1e-25 119.8 93 60.2
AL7G45500 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 1.5e-25 119.4 87 66.7
BcaB04g16944 Brassica carinata HOM05D007540 ORTHO05D009531 1.5e-25 119.4 95 60.0
Carub.0007s3756 Capsella rubella HOM05D007540 ORTHO05D009531 2.5e-25 118.6 95 62.1
SalBow5G1353 Salvia bowleyana HOM05D007540 ORTHO05D009531 3.3e-25 118.2 90 58.9
SalBow5G2392 Salvia bowleyana HOM05D007540 ORTHO05D009531 3.3e-25 118.2 90 58.9
SalBow5G3852 Salvia bowleyana HOM05D007540 ORTHO05D009531 3.3e-25 118.2 90 58.9
BraA01t04213Z Brassica rapa HOM05D007540 ORTHO05D009531 4.3e-25 117.9 95 60.0
Thhalv10002936m.g Eutrema salsugineum HOM05D007540 ORTHO05D009531 7.4e-25 117.1 93 60.2
Carub.0006s2979 Capsella rubella HOM05D007540 ORTHO05D009531 2.1e-24 115.5 80 70.0
Carub.0007s3736 Capsella rubella HOM05D007540 ORTHO05D009531 3.7e-24 114.8 95 61.1
AT5G36910 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 8.2e-24 113.6 94 61.7
SalBow4G2623 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.4e-23 112.8 86 60.5
BcaB01g02553 Brassica carinata HOM05D007540 ORTHO05D009531 5.3e-23 110.9 90 63.3
CARHR057950 Cardamine hirsuta HOM05D007540 ORTHO05D009531 6.9e-23 110.5 92 58.7
C03p44700 Brassica napus HOM05D007540 ORTHO05D009531 5.8e-22 107.5 83 60.2
BolC3t16732H Brassica oleracea HOM05D007540 ORTHO05D009531 5.8e-22 107.5 83 60.2
CARHR180400 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.0e-21 106.7 84 58.3
AT1G72260 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 1.3e-21 106.3 79 64.6
BcaC01g04144 Brassica carinata HOM05D007540 ORTHO05D009531 2.2e-21 105.5 83 60.2
SalBow8G3153 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.2e-21 105.5 87 62.1
CARHR085710 Cardamine hirsuta HOM05D007540 ORTHO05D009531 2.9e-21 105.1 92 55.4
A03p36900 Brassica napus HOM05D007540 ORTHO05D009531 3.8e-21 104.8 83 60.2
BraA03t12853Z Brassica rapa HOM05D007540 ORTHO05D009531 3.8e-21 104.8 83 60.2
Aqoxy4G00585 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 6.5e-21 104.0 64 67.2
BcaB01g04016 Brassica carinata HOM05D007540 ORTHO05D009531 6.5e-21 104.0 82 62.2
CARHR085700 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.4e-20 102.8 88 55.7
BcaB04g18623 Brassica carinata HOM05D007540 ORTHO05D009531 3.2e-20 101.7 79 58.2
BcaB01g04013 Brassica carinata HOM05D007540 ORTHO05D009531 9.3e-20 100.1 82 59.8
BcaB01g04014 Brassica carinata HOM05D007540 ORTHO05D009531 9.3e-20 100.1 82 59.8
BcaB01g04017 Brassica carinata HOM05D007540 ORTHO05D009531 9.3e-20 100.1 82 59.8
BcaB01g04012 Brassica carinata HOM05D007540 ORTHO05D009531 1.2e-19 99.8 82 59.8
BcaB01g04015 Brassica carinata HOM05D007540 ORTHO05D009531 2.7e-19 98.6 85 60.0
Carub.0002s0647 Capsella rubella HOM05D007540 ORTHO05D009531 2.7e-19 98.6 86 57.0
CANSAT25G3303 Cannabis sativa HOM05D007540 ORTHO05D009531 3.5e-19 98.2 95 52.6
CARHR085180 Cardamine hirsuta HOM05D007540 ORTHO05D009531 6.0e-19 97.4 83 60.2
A02p14410 Brassica napus HOM05D007540 ORTHO05D009531 3.0e-18 95.1 79 60.8
BraA02t06505Z Brassica rapa HOM05D007540 ORTHO05D009531 3.0e-18 95.1 79 60.8
Carub.0007s0910 Capsella rubella HOM05D007540 ORTHO05D009531 6.7e-18 94.0 91 46.2
AT2G15010 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 1.1e-17 93.2 93 51.6
AL3G46810 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 3.3e-17 91.7 93 50.5
Carub.0001s2385 Capsella rubella HOM05D007540 ORTHO05D009531 2.2e-16 89.0 84 53.6
Carub.0001s2384 Capsella rubella HOM05D007540 ORTHO05D009531 2.8e-16 88.6 84 54.8
BcaC03g14859 Brassica carinata HOM05D007540 ORTHO05D009531 4.8e-16 87.8 78 53.8
SalBow1G7590 Salvia bowleyana HOM05D007540 ORTHO05D009531 6.3e-16 87.4 92 46.7
BcaB01g02415 Brassica carinata HOM05D007540 ORTHO05D009531 1.8e-15 85.9 65 63.1
SalBow5G5034 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.2e-14 83.2 64 57.8
SalBow8G0994 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.1e-12 76.6 87 49.4
Aqoxy4G01164 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 2.7e-11 72.0 85 49.4
Os06g0514100 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 3.6e-11 71.6 92 42.4
Aqoxy4G00580 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 1.8e-10 69.3 54 64.8
Aqoxy4G00581 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 6.7e-10 67.4 54 61.1
Os06g0517700 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 1.1e-09 66.6 89 37.1
C02p23290 Brassica napus HOM05D007540 ORTHO05D009531 5.7e-09 64.3 88 42.0
Os06g0509900 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 9.7e-09 63.5 86 38.4
BcaB01g02552 Brassica carinata HOM05D007540 ORTHO05D009531 3.7e-08 61.6 34 79.4
Carub.0007s3752 Capsella rubella HOM05D007540 ORTHO05D009531 4.8e-08 61.2 93 40.9
BcaC03g14860 Brassica carinata HOM05D007540 ORTHO05D009531 1.2e-06 56.6 50 56.0
PSO732G0564 Papaver somniferum HOM05D007540 ORTHO05D009531 1.2e-06 56.6 96 35.4
PSO229G0110 Papaver somniferum HOM05D007540 ORTHO05D009531 2.6e-06 55.5 97 37.1
PSO675G0451 Papaver somniferum HOM05D007540 ORTHO05D009531 5.9e-06 54.3 93 35.5


User provided reference genes

Program Settings