Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR177590 Cardamine hirsuta HOM05D000005 ORTHO05D004260 2.6e-36 154.8 76 100.0
CARHR177610 Cardamine hirsuta HOM05D000005 ORTHO05D004260 3.7e-27 124.4 74 81.1
Carub.0008s0323 Capsella rubella HOM05D000005 ORTHO05D004260 3.5e-25 117.9 76 76.3
AL65U10040 Arabidopsis lyrata HOM05D000005 ORTHO05D004260 6.6e-24 113.6 73 72.6
AL8G14280 Arabidopsis lyrata HOM05D000005 ORTHO05D004260 6.6e-24 113.6 73 72.6
Sp2g09850 Schrenkiella parvula HOM05D000005 ORTHO05D004260 9.5e-23 109.8 69 72.5
AT5G45070 Arabidopsis thaliana HOM05D000005 ORTHO05D004260 3.1e-21 104.8 76 65.8
BcaC06g34491 Brassica carinata HOM05D000248 ORTHO05D004260 9.2e-18 93.2 75 62.7
BolC7t43322H Brassica oleracea HOM05D000005 ORTHO05D004260 9.2e-18 93.2 75 62.7
BraA06t27551Z Brassica rapa HOM05D000005 ORTHO05D004260 9.2e-18 93.2 75 62.7
BcaC06g31576 Brassica carinata HOM05D000005 ORTHO05D004260 6.0e-17 90.5 75 61.3
AT5G45090 Arabidopsis thaliana HOM05D000248 ORTHO05D004260 3.9e-16 87.8 76 53.9
AL65U10020 Arabidopsis lyrata HOM05D000248 ORTHO05D004260 3.3e-15 84.7 74 51.4
CARHR177550 Cardamine hirsuta HOM05D000248 ORTHO05D004260 4.3e-15 84.3 73 53.4
CARHR177600 Cardamine hirsuta HOM05D000248 ORTHO05D000146 1.6e-14 82.4 73 50.7
Thhalv10001123m.g Eutrema salsugineum HOM05D000248 ORTHO05D004260 3.6e-14 81.3 74 54.1
BcaC06g34492 Brassica carinata HOM05D000005 ORTHO05D004260 4.7e-14 80.9 69 59.4
BraA09t41836Z Brassica rapa HOM05D000005 ORTHO05D004260 6.8e-13 77.0 77 46.8
BcaC04g21800 Brassica carinata HOM05D000005 ORTHO05D004260 1.2e-12 76.3 77 50.6
BcaC07g41807 Brassica carinata HOM05D000248 ORTHO05D004260 1.2e-12 76.3 77 48.1
Thhalv10001121m.g Eutrema salsugineum HOM05D000005 ORTHO05D004260 1.5e-12 75.9 73 49.3
CARHR177030 Cardamine hirsuta HOM05D000005 ORTHO05D010626 2.6e-12 75.1 68 54.4
AL8G13710 Arabidopsis lyrata HOM05D000005 ORTHO05D031400 3.4e-12 74.7 75 49.3
AT5G45080 Arabidopsis thaliana HOM05D000005 ORTHO05D004260 3.4e-12 74.7 76 50.0
A09p21510 Brassica napus HOM05D000005 ORTHO05D004260 4.4e-12 74.3 77 49.4
C09p27380 Brassica napus HOM05D000005 ORTHO05D004260 4.4e-12 74.3 77 49.4
BolC9t55611H Brassica oleracea HOM05D000005 ORTHO05D004260 7.6e-12 73.6 77 49.4
C08p48690 Brassica napus HOM05D000005 ORTHO05D004260 1.3e-11 72.8 77 46.8
BolC8t52407H Brassica oleracea HOM05D000005 ORTHO05D004260 1.3e-11 72.8 77 46.8
BcaB07g30914 Brassica carinata HOM05D000005 ORTHO05D004260 1.7e-11 72.4 77 48.1
AL65U10030 Arabidopsis lyrata HOM05D000005 ORTHO05D004260 3.8e-11 71.2 76 47.4
AL8G14290 Arabidopsis lyrata HOM05D000005 ORTHO05D004260 3.8e-11 71.2 76 47.4
Carub.0008s0322 Capsella rubella HOM05D000005 ORTHO05D004260 4.9e-11 70.9 76 47.4
CARHR177540 Cardamine hirsuta HOM05D000005 ORTHO05D004260 1.1e-10 69.7 77 46.8
Aa31LG9G8100 Aethionema arabicum HOM05D000248 ORTHO05D000146 4.1e-10 67.8 78 44.9
Aa31LG9G8110 Aethionema arabicum HOM05D000248 ORTHO05D004260 1.0e-08 63.2 76 43.4
AL65U10050 Arabidopsis lyrata HOM05D000005 ORTHO05D004260 5.1e-08 60.8 76 43.4
AL1G48370 Arabidopsis lyrata HOM05D000248 ORTHO05D000146 1.5e-07 59.3 73 41.1
AL8G14260 Arabidopsis lyrata HOM05D000248 ORTHO05D000146 1.5e-07 59.3 73 39.7
AT1G33920 Arabidopsis thaliana HOM05D000248 ORTHO05D000146 2.5e-07 58.5 73 41.1
CARHR177690 Cardamine hirsuta HOM05D000248 ORTHO05D000146 7.3e-07 57.0 72 40.3
CARHR033320 Cardamine hirsuta HOM05D000248 ORTHO05D000146 9.6e-07 56.6 73 38.4
AT4G19840 Arabidopsis thaliana HOM05D000248 ORTHO05D000146 1.6e-06 55.8 76 39.5
Aa31LG9G8140 Aethionema arabicum HOM05D000248 ORTHO05D004260 2.8e-06 55.1 76 43.4
AT1G65390 Arabidopsis thaliana HOM05D000005 ORTHO05D000146 2.8e-06 55.1 73 39.7
Aa31LG9G8030 Aethionema arabicum HOM05D000248 ORTHO05D000146 8.1e-06 53.5 74 41.9
AL7G34240 Arabidopsis lyrata HOM05D000248 ORTHO05D000146 8.1e-06 53.5 76 38.2


User provided reference genes

Program Settings